NCBI GenBank

Mouse To Human Homology Region Map, Chromosome 2

How to use this Resource

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group
S Kin17 10 KIN17 10p 100
1.0 Intin2 10 ITIH2 10p15-p14 100
b 4.0 Gata3 10 GATA3 10p15 R H12715 17-22 100
5.0 Mrc1 10 MRC1 10p13 100
6.4 Il15ra 10 IL15RA 10p15-p14 100
6.4 Il2ra 10 IL2RA 10p15-p14 G 100
b 7.0 Vim 10 VIM 10p13 G 100
b 9.0 Bmi1 10 BMI1 10p13 R SHGC-11041 43-46 100
9.0 Gad2 10 GAD2 10p12-p11.2 R SGC31510 50-53 100
a, c 10.5 Pax8 2 PAX8 2q12-q14 15
a 10.0 Il1rn 2 IL1RN 2q12-q13 R stSG1594 129-134 15
a 12.0 Grin1 9 GRIN1 9q34.3 99
12.3 C8g 9 C8G 9q 99
12.6 Abc2 9 ABC2 9q34 99
12.9 Ptgds 9 PTGDS 9q34.2-q34.3 99
14.0 us 9 NPS1 9q34 99
15.0 Notch1 9 NOTCH1 9q34.3 99
15.3 Vav2 9 VAV2 9q34 99
15.5 Surf1 9 SURF1 9q33-q34 R stSG1371 142-148 99
15.5 Surf5 9 SURF5 9q34.1 99
b, c 15.0 Notch1 9 NOTCH1 9q34.3 99
15.5 Dbh 9 DBH 9q34.3 99
a, c 17.0 Rxra 9 RXRA 9q34 99
c 17.0 Col5a1 9 COL5A1 9q34 99
a 17.0 Rxra 9 RXRA 9q34 99
17.0 Cel 9 CEL 9q34.3 99
a, b, c 18.0 Spna2 9 SPTAN1 9q33-q34 R SHGC-278 136-144 99
b 20.0 Ass1 9 ASS 9q34.1 G 99
b, c 21.0 Abl 9 ABL 9q34.1 G 99
b 21.0 D2H9S46E 9 D9S46E 9q34 99
21.2 Fpgs 9 FPGS 9cen-q34 99
21.4 Eng 9 ENG 9q34-qter 99
c 21.6 Ak1 9 AK1 9q34.1-q34.2 G 99
c 22.0 Pbx3 9 PBX3 9q33-q34 99
b, c 22.5 Grp78 9 GRP78 9q R WI-6005 136-141 99
b, c 23.5 Hc 9 C5 9q33 R WI-12734 130 99
a 23.5 Ftzf1 9 FTZF1 9q33 99
c 24.0 Epb7.2 9 EPB72 9q34 99
b, c 24.5 Gsn 9 GSN 9q33 G 99
25.0 Ggta1 9 GGTA1 9q33-q34 99
27.0 Lcn2 9 LCN2 9q34 99
29.0 Ptgs1 9 PTGS1 9 99
a, b 30(g) Neb 2* NEB 2q31-q32 R M19668 189-192 18
b 29.2 His1 2 VIS1 2q14-q21 17
36.0 Scn2a 2 SCN2A 2q23 17
35.0 Dpp4 2 DPP4 2p23-qter 17
36.0 Scn3a 2 SCN3A 2q23-q24.3 17
36.0 Scn1a 2 SCN1A 2q23 17
36.0 Scn2a 2 SCN1B 2q24-q31 17
a, b 36.0 Gcg 2 GCG 2q23 R,G* SHGC-11004 170-180 17
b 38.0 Itga6 2 ITGA6 2 R SHGC12676 170-180 17
41.0 Ssb 2 SSB 2 R SHGC-10731 170-180 17
43.0 Gad1 2 GAD1 2q31 R SGC31511 175-180 17
b, c 44.0 Acra 2 CHRNA1 2q24-q32 17
44.0 Ttn 2 TTN 2q31-q32 R Bda09g02 182-189 17
44.0 Dlx1 2 DLX1 2q32 17
44.0 Dlx2 2 DLX2 2q32 17
45.0 Evx2 2 EVX2 2q24.3-q31 17
b 45.0 Hoxd1 2 HOXD1 2q31 17
45.0 Hoxd3 2 HOXD3 2q31-q37 17
45.0 Hoxd4 2 HOXD4 2q31-q37 17
45.0 Hoxd8 2 HOXD8 2q31-q37 17
45.0 Hoxd9 2 HOXD9 2q31-q37 R X59372 182-189 17
45.0 Hoxd10 2 HOXD10 2q31-q37 17
45.0 Hoxd11 2 HOXD11 2q31-q37 17
45.0 Hoxd12 2 HOXD12 2q31-q37 17
45.0 Hoxd13 2 HOXD13 2q31-q37 17
a 45.0 AA119941(a) 2 21862(u) 2 R stSG2611 192-194 17
46.0 Itgav(g) 2 ITGAV 2q31-q32 17
b 46.0 Itga4(g) 2 ITGA4 2q31-32 R X16983 189-194 17
a 49.6 Cd82 11 CD82 11p11.2 112
50.0 D11S149h 11 D11S149 11 112
52.0 Hmg1 11 HMG1 11q12 112
52.0 Cf2 11 F2 11p11-q12 112
52.4 Ssrp1 11 SSRP1 11q12 112
53.0 Rapsn 11 RAPSN 11 112
53.0 Catns 11 CTNND 11q11 112
53.0 Mdk 11 MDK 11p11.2 112
b 53.0 Sfpi1 11 SPI1 11p11 R 112
54.0 Mdk 11 NEGF2 11p11.2 R 112
b 54.0 D2Hgu1 11 D11S102 11p13 112
54.0 Crabp2 11 CRABP2 11p13 112
54.0 Slc1a2 11 SLC1A2 11p12-p12 112
56.0 Rag2 11 RAG2 11p13 R 112
b 56.0 Rag1 11 RAG1 11p13 R 112
56.0 Cd44 11 CD44 11p13 R WI-7184 49-54 112
56.0 D2Mit1 11 D11S14 11p12.08-p11 112
b 57.0 Cas1 11 CAT 11p13 R,G 112
58.0 D11S412h 11 D11S412 11p13 112
58.0 D11S411h 11 D11S411 11p13 112
58.0 D11S408h 11 D11S408 11p13 112
58.0 D11S16h 11 D11S16 11p13 112
58.0 Sey 11 AN2 11p13 112
58.0 Wt1 11 WT1 11p13 R,G* WT1 38-44 112
58.0 Pax6 11 PAX6 11p13 R 112
b 60.0 Rbtn2 11 RBTN2 11p13 R 112
b 60.0 Fshb 11 FSHB 11p13 R 112
S Acp2 11 ACP2 11p12-p11 R 112
60.0 Lmo2 11 LMO2 11p13-p12 112
b 61.0 Kcna4 11 KCNA4 11p14 R 112
b 62.0 Bdnf 11 BDNF 11p13 R 112
62.0 Blvr 7 BLVR 7p14-cen 72?
b 64.0 Sgne1 15 SGNE1 15q13-q14 135
b 64.0 Actc1 15 ACTC 15q11-qter R,G SGC35611 25-32 135
65.0 Fmn 15 FMN 15q13-q14 G 135
S Ryr3 15 RYR3 15q14-q15 R SHGC-13587 25-28 135
a, b 65.0 Thbs1 15 THBS1 15q15 R,G SHGC-10736 32-47 135
66.0 Sdh1 15 SORD 15pter-q21 135
b, c 67.0 Ltk 15 LTK 15q11-qter 135
b 67.0 Epb4.2 15 EPB42 15q15 R H66974 32-45 135
67.0 Ckmt1 15 CKMT1 15q15 R WI-15193 32-45 135
67.0 Reca 15 RECA 15q15.1 135
67.0 Tyro3 15 TYRO3 15q15 135
67.0 Plcb2 15 PLCB2 15 135
67.0 Ltk 15 LTK 15 135
b 69.0 B2m 15 B2M 15q21-q22 R SGC31499 32-45 135
71.0 Hdc 15 HDC 15 R SHGC-9826 32-47 135
71.0 Fbn1 15 FBN1 15q21 R,G WI-18561 45-47 135
S Fgf7 15 FGF7 15 135
b 73.0 Adra2b 2* ADRA2B 2p13-2q13 G 14
b 73.0 Glvr1 2* GLVR1 2q11-q14 R SHGC-12507 127 14
a, b 73.0 Il1a 2* IL1A 2q13 R,G SHGC-10703 127 14
c 73.0 Il1b 2* IL1B 2q13-q21 R stSG142 127-134 14
73.0 Paep 9* PAEP 9q34.2-q34 98
73.2 Avp 20 AVP 20p13 182
73.2 Oxt 20 OXT 20p13 G 182
b 73.5 Snrbp 20 SNRBP 20 R WI-8798 6-9 182
a, b 73.5 Pdyn 20 PDYN 20pter-p12.2 R,G WI-7002 2-11 182
74.0 Ptpra 20 PTPRA 20p13 R WI-8798 6-9 182
74.1 Itp 20 ITPA 20p 182
74.2 Cenpb 20 CENPB 20p13 182
75.0 Sn 20 SN 20p13 182
b, c 75.2 Prn-p 20 PRNP 20pter-p12 182
75.2 Pcna 20 PCNA 20pter-p12 182
b 75.6 Chgb 20 CHGB 20pter-p12 R WI-9063 9-11 182
b 76.1 Bmp2 20 BMP2A 20p12 182
76.7 Plcb1 20 PLCB1 20 182
77.0 Plcb4 20 PLCB4 20 R SGC31545 25-30 182
81.4 Pcsk2 20 PCSK2 20p11.2 182
b 82.0 Pax1 20 PAX1 20p11.2 182
a, b 84.0 Thbd 20 THBD 20p11.2 R WI-7085 47-49 182
b 84.0 Pygb 20 PYGB 20p11.2 R stSG3016 47-49 182
84.0 Cst3 20 CST3 20p11.2 R SHGC-11944 47-50 182
b 86.0 Hck1 20 HCK 20q11-q12 R WI-7020 49-50 182
88.8 a 20 ASIP 20q11.2-q12 R SGC36988 50-53 182
b 89.0 Ghrh 20 GHRH 20q11.2 182
89.0 Ahcy 20 AHCY 20cen-q13.1 182
b 91.0 Src 20 SRC 20q11-q13 G 182
91.0 Rpn2 20 RPN2 20q12-q13 R WI-8584 50-53 182
92.0 Plcg1 20 PLCG1 20q12-q13 G 182
92.0 Rbl1 20 RBL1 20q11.2 R L14812 50-53 182
a, b 92.0 Top1 20 TOP1 20q12-q13.1 R WI-7849 94-96 182
93.0 Pltp 20 PLTP 20q12-q13.1 182
a, b 94.0 Ada 20 ADA 20q12-q13.1 G 182
b 94.0 Svp1 20 SEMG1 20q12-q13.1 182
94.0 Svp3 20 SEMG2 20q12-q13.2 182
94.0 Synd4 20 SDC4 20q12-q13 R WI-7527 61-66 182
b 97.0 Cepbp 20 CEPBP 20q12-q13.1 R H15813 73-74 182
97.0 Cd40 20 CD40 20q12-q13.1 182
97.0 Kcnb1 20 KCNB1 20q13.2 R SHGC-12448 66-74 182
99.0 Cyp24 20 CYP24 20q13.2-q13.3 182
100.0 Mc3r 20 MC3R 20q13.2-q13.3 182
102.0 Bmp7 20 BMP7 20 R SHGC-11943 82-96 182
b 103.0 Pck1 20 PCK1 20q13.2 182
b, c 104.0 Gnas 20 GNAS1 20q13.2 R,G stSG1612 85-94 182
104.0 Edn3 20 EDN3 20q13.2-q13.3 R WI-17085 82-96 182
108.0 Acra4 20 CHRNA4 20q13 182
S Ntsr1 20 NTSR1 20q13 182

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Human Chr. Human Chr. Human Chr. Human Chr. Human Chr. Human Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.