NCBI GenBank

Mouse To Human Homology Region Map, Chromosome 17

How to use this Resource

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group
3.7 Tcp10a 6 TCP10 6q21-q27 67
7.3 Plg 6 PLG 6q26-q27 G 67
b 7.4 Igf2r 6 IGF2R 6q26-q27 67
b 7.5 Mas1 6 MAS 6q24-q27 67
7.6 Acat1 6 ACAT 6q26-q27 67
7.5 Tcp1 6 TCP1 6q26-q27 G 67
7.6 Sod2 6 SOD2 6q25.2 G 67
a 7.7 Tcp10b 6 TCP10 6q27 G 67
7.8 Tcp10c 6 TCP10 6q27 G 67
a 8.1 Thbs2 6 THBS2 6q27 67
8.2 Tcte3 6 TCTE3 6q27 67
8.3 Tbp 6 TBP 6q27 67
10.1(y) Znf40 19 ZNF40 19q13.3-13.4 180
10.2 Znf160 19 ZNF160 19q13.3-13.4 X 180
10.2 Fpr1 19 FPR1 19q13.3-13.4 180
a 10.3(y) Has1 19 HAS1 19q13.3-13.4 180
c 10.4 Ccnf 16 CCNF 16p13.3 142
10.0 Erv1 16 ERV1 16p13.2 142
c 10.3 Tsc2 16 TSC2 16p13.3 R 142
10.4 Mcpt7 16 TPS2 16 142
10.4 Pkd1 16 PKD1 16p13.3 R 142
S D17H16S259 16 D16S259 16p13.3 R 142
10.4 D17Lon4 16 D16S666E 16p R 142
11.0 Crebbp 16 CREBBP 16p13.2-13.3 142
11.0 Glo2 16 HAGH 16p13.3 142
11.7 Mcpt6 16 TPS1 16 142
S Umod 16* UMOD 16p13.11 R SHGC-12858 34-41 144
S Crym 16* CRYM 16p12 R SHGC-11016 39-41 144
13.2 Hmgi 6* HMGIY 6p21 61
16.0 Glo1 6* GLO1 6p21.2-p21.1 G 61
b 16.4 Pim1 6* PIM 6p21 G 61
17.1 Clps 6* CLPS 6pter-p21 61
17.0 Tff3 21 TFF3 21q22.3 184
b 17.2 D17H21S56 21 D21S56 21q22.3 184
a 17.4 Crya1 21 CRYAA 21q22.3 P 184
17.4 Cbs 21 CBS 21q22.3 R,P SHGC-447 50-57 184
18.0 Glp1r 6 GLP1R 6p21 60
18.4 Rps18 6 RPS18 6p21.3 60
18.5 D17H6S111E 6 D6S111E 6p21.3 60
18.5 D17H6S112E 6 D6S112E 6p21.3 60
18.5 H2-Ke4 6 RING5 6p21.3 60
18.5 H2-Ke5 6 KE5 6p21.3 60
a 18.5 Rxrb 6 RXRB 6p21.3 60
18.5 H2-Pb 6 DPB 6p21.3 P 60
18.5 Col11a2 6 COL11A1 6p21.3 60
18.5 H2-Oa 6 HLA-DNA 6p21.3 P 60
18.5 D17H6S113E 6 D6S113E 6p21.3 60
18.6 H2-Ma 6 HLA-DMA 6p21.3 P 60
18.6 H2-Mb2 6 HLA-DMB 6p21.3 P 60
18.6 H2-Mb1 6 HLA-DMB 6p21.3 P 60
18.6 Lmp2 6 LMP2 6p21.3 P 60
18.6 Tap2 6 TAP2 6p21.3 P 60
18.6 Lmp7 6 LMP7 6p21.3 P 60
18.6 Tap1 6 TAP1 6p21.3 P 60
18.6 H2-Ob 6 DOB 6p21.3 P 60
18.6 H2-Ab 6 DQB1 6p21.3 P 60
18.7 H2-Aa 6 DQA1 6p21.3 P,G 60
a 18.7 H2-Eb1 6 DRB1 6p21.3 P,G 60
18.7 H2-Eb2 6 DRB2 6p21.3 P 60
18.7 H2-Ea 6 DRA 6p21.3 P,G 60
18.7 Int3 6 INT3 6p21.3 60
18.7 Tnx 6 TNXA 6 60
18.8 Cyp21a1 6 CYP21A1 6p21.3 60
18.8 D17H6S214E 6 D6S214E 6p21.3 60
18.8 D17H6S208E 6 D6S212E 6p21.3 60
18.8 D17H6S212E 6 D6S208E 6p21.3 60
a 18.8 C4 6 C4 6p21.3 R SGC31623 44-48 60
18.8 Cyp21a2-ps 6 CYP21P 6p21.3 60
18.8 Prph2 6 RDS 6p21.3 60
18.9 Bf 6 BF 6p21.3 R SGC32658 44-48 60
18.9 C2 6 C2 6p21.3 R WI8686 44-48 60
18.9 Bat8 6 BAT8 6p21.3 60
18.9 Bat9 6 BAT9 6p21.3 60
18.9 Bat7 6 BAT7 6p21.3 60
18.9 Neu1 6 NEU 6p21.3 60
18.9 D17H6S58E 6 D6S58E 6p21.3 60
18.9 Hsp70-1 6 HSPA1B 6p21.3 R stSG6310 44-48 60
18.9 Hsp70-3 6 HSPA1A 6p21.3 60
18.9 Hsc70t 6 HSPA1L 6p21.3 G 60
19.0 Crebrp 6 CREBRP 6p21.3 60
19.0 D17H6S56E 6 D6S56E 6p21.3 60
19.0 G7b 6 G7b 6p21.3 60
19.0 D17H6S54E 6 D6S54E 6p21.3 60
19.0 D17H6S82E 6 D6S82E 6p21.3 60
19.0 D17H6S51E 6 D6S51E 6p21.3 60
19.0 D17H6S52E 6 D6S52E 6p21.3 60
19.0 Itpr3 6 ITPR3 6p21 60
19.1 Tnfb 6 TNFB 6p21.3 60
20.5(g) D17Leh89 6 D6S131 6p21.3-22.1 R 46 60
b 19.1 Lta 6 TNFA 6p21.3 R SHGC-11076 42-44 60
19.1 D17H6S81E 6 D6S81E 6p21.3 60
19.2 Pou5f1 6 POU5F1 6p21.3 60
19.3 MMR1 6 HSR1 6p21.3 60
19.7 S 6 S 6p21.3 R WI-9276 44 60
20.0 Tubb 6 TUBB 6p21.3 60
20.3 Mog 6 MOG 6p21.3 60
20.8 Pgk2 6* PGK2 6p21.1-p11 62
21.5 Cak 6* CAK 6p21.3 62
22.5 Mut 6* MUT 6p21.2-p21.1 G 62
22.8 Tpx1 6* TPX1 6p21-qter R SHGC-9778 72-73 62
23.5 Tcte1 6* TCTE1 6p21.2-p21.1 G 62
26.0 Nfya 6* NFYA 6p21 62
S Itpr3 6* ITPR3 6p21 62
28.0 rd2 6* RDS 6p21.2-cen 62
28.1 Cbfa1 6* CBFA1 6p21 62
30.0 Upg1 6* PGC 6pter-p21 62
b 30.4 Mep1a 6* MEP1A 6p12-p11 62
b 32.7 Vav 19* VAV 19p13.3 X,G 164
34.3 C3 19* C3 19p13.3 R,X,G SGC31874 0-19 164
b 38.0 Lama1 18 LAMA 18p11.2-.3 R L34155 42-52 155
40.0 Prkr 2 PRKR 2p22-p21 10
44.0 Sos1 2 Sos1 2p22-p21 10
a 45.3 W61859(a) 2 13505(u) 2 R stSG2372 51-54 10
a 45.3 Xdh 2 XDH 2p23-p22 R SHGC-12567 54-58 10
45.9 Msh2 2 MSH2 2p22-p21 R SHGC-10660 74-77 10
b 46.5 Lhcgr 2 LHCGR 2p21 R WI-7751 73-77 10
50.0 Alk 2 ALK 2p23 10
54.3 Pigf 2 PIGF 2 R WI-7257 73-77 10

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Human Chr. Human Chr. Human Chr. Human Chr. Human Chr. Human Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.