Mouse To Human Homology Region Map, Chromosome 13

Mouse To Human Homology Region Map, Chromosome 13

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group

4.0 Ryr2 1 RYR2 1 8

a, b 7.0 Nid 1 NID 1q34-1q43 R WI-7199 258-272 8

7.0 Lyst 1 LYST 1q34-1q43 R SHGC-32758 246-272 8

8.0 Gli3 7 GLI3 7p13 P,R D7S2746 62-69 73

8.0 Xt 7 GCPS 7p13 73

a, b 10.0 Inhba 7 INHBA 7p15-p13 P,R SHGC-12763 62-64 73

10.0 Amph 7 AMPH 7p14-p13 P 73

b 10.0 Rasl1 7 RAL 7p22-p15 73

b 10.0 Tcrg 7 TCRG 7p15 P,G 73

b 14.0 Pl1 17 CSH1 17q22-q24 151

b 14.0 Pl2 17 CSH2 17q22-q24 151

12(g) BTN 6 Btn 6p22-p21.3 59

12(g) Hist1 6 H1 6p22.2-p21.1 R WI-11794 42-44 59

b 14.0 Prl 6 PRL 6p23-p22.3 R SHGC-10942 36-42 59

b 16.0 Fim1 6 FIM1 6p23-p22.3 59

17.0 Gcnt1 6 GCNT1 6 R SHGC-12039 13 59

b 18.0 Bmp6 6 BMP6 6 R SHGC-9825 12-14 59

a 23.0 Mak 6 MAK 6 59

26.0 Edn1 6 EDN1 6p24.2-p23 59

b 27.0 D13H6S231E 6 D6S231E 6p23 59

S Pde4d 5 PDE4D 5 56

32.0 Msx2 5 MSX2 5q34-q35 G 56

a, b 34.0 Drd1 5 SLC6A3 5q34-q35 R X58987 179-182 56

34.0 Caml 5 CAML 5 56

34.0 Cta2 5 CTA2 5 R SGC35786 161-163 56

b 35.0 Il9 5 IL9(g) 5q22-q32(g) G* 56

34.0 Fgfr4 5 FGFR4 5q33-qter 56

35.0 Cam1 5 CAMLG 5q23-q31 56

38(g) Tgfb1 5 TGFB1 5q31 56

38(g) Bhr 5 BHR 5q31-q33 56

30(y)(g) Ctsl 9 CTSL 9q22.3 R SHGC-12637 86-93 96

36.0 Facc 9 FACC 9q22.3 96

37.0 Syk 9 SYK 9q2 96

a 37.0 Gas1 9 GAS1 9q21.3-q22 96

39.0 Srd5a1 5* SRD5A1 5p15 44

41.0 Dat1 5* DAT1 5p15.3 44

41.0 Adcy2 5* ADCY2 5p15.3-p15.2 R SHGC-9796 13-18 44

44.0 Pcsk1 5 PCSK1 5q15-q21 46

47.0 Cf2r 5 F2R 5q13 46

b 47.0 Rasa 5 RASA 5q13.3 46

a 51(g) AA096661(a) 5 10470(u) 5 R SGC33609 82-92 46

a, b 51(g) Dhfr 5 DHFR 5q11.2-q13.2 G 46

49.0 Hmgcr 5 HMGCR 5q13.3-q14 R WI-7171 79-82 46

50.0 As1 5 ARSB 5p11-q13 46

50.0 PIK3R1 5 PIK3R1 5q12-q13 46

b 50.0 Map1b 5 MAP1B 5q13 R,G SHGC-10005 74-79 46

b 51.0 Crhbp 5 CRHBP 5 46

b 52.0 Hexb 5 HEXB 5q13 G 46

55.0 Cspg2 5 CSPG2 5q12-q13 46

56.0 Ccnb1-rs1 5 CCNB1 5q13-qter 46

a, b 58.0 Htr1a 5 HTR1A 5q11-q14 46

a, b 64.0 Ctla3 5* CTLA3 5q11-q12 49

b 64.0 Itga2 5* ITGA2 5q23-q31 49

b 65.0 Itga1 5* ITGA1 5 49

67.0 Etfa 15 ETFA 15q23-q25 138

Cross	Mouse Locus	Mouse Gene	Human Chr.	Human Gene	In Situ	Method	RH Map	Genethon Map	Homology Group
	4.0	Ryr2	1	RYR2	1				8
a, b	7.0	Nid	1	NID	1q34-1q43	R	WI-7199	258-272	8
	7.0	Lyst	1	LYST	1q34-1q43	R	SHGC-32758	246-272	8
	8.0	Gli3	7	GLI3	7p13	P,R	D7S2746	62-69	73
	8.0	Xt	7	GCPS	7p13				73
a, b	10.0	Inhba	7	INHBA	7p15-p13	P,R	SHGC-12763	62-64	73
	10.0	Amph	7	AMPH	7p14-p13	P			73
b	10.0	Rasl1	7	RAL	7p22-p15				73
b	10.0	Tcrg	7	TCRG	7p15	P,G			73
b	14.0	Pl1	17	CSH1	17q22-q24				151
b	14.0	Pl2	17	CSH2	17q22-q24				151
	12(g)	BTN	6	Btn	6p22-p21.3				59
	12(g)	Hist1	6	H1	6p22.2-p21.1	R	WI-11794	42-44	59
b	14.0	Prl	6	PRL	6p23-p22.3	R	SHGC-10942	36-42	59
b	16.0	Fim1	6	FIM1	6p23-p22.3				59
	17.0	Gcnt1	6	GCNT1	6	R	SHGC-12039	13	59
b	18.0	Bmp6	6	BMP6	6	R	SHGC-9825	12-14	59
a	23.0	Mak	6	MAK	6				59
	26.0	Edn1	6	EDN1	6p24.2-p23				59
b	27.0	D13H6S231E	6	D6S231E	6p23				59
	S	Pde4d	5	PDE4D	5				56
	32.0	Msx2	5	MSX2	5q34-q35	G			56
a, b	34.0	Drd1	5	SLC6A3	5q34-q35	R	X58987	179-182	56
	34.0	Caml	5	CAML	5				56
	34.0	Cta2	5	CTA2	5	R	SGC35786	161-163	56
b	35.0	Il9	5	IL9(g)	5q22-q32(g)	G*			56
	34.0	Fgfr4	5	FGFR4	5q33-qter				56
	35.0	Cam1	5	CAMLG	5q23-q31				56
	38(g)	Tgfb1	5	TGFB1	5q31				56
	38(g)	Bhr	5	BHR	5q31-q33				56
	30(y)(g)	Ctsl	9	CTSL	9q22.3	R	SHGC-12637	86-93	96
	36.0	Facc	9	FACC	9q22.3				96
	37.0	Syk	9	SYK	9q2				96
a	37.0	Gas1	9	GAS1	9q21.3-q22				96
	39.0	Srd5a1	5*	SRD5A1	5p15				44
	41.0	Dat1	5*	DAT1	5p15.3				44
	41.0	Adcy2	5*	ADCY2	5p15.3-p15.2	R	SHGC-9796	13-18	44
	44.0	Pcsk1	5	PCSK1	5q15-q21				46
	47.0	Cf2r	5	F2R	5q13				46
b	47.0	Rasa	5	RASA	5q13.3				46
a	51(g)	AA096661(a)	5	10470(u)	5	R	SGC33609	82-92	46
a, b	51(g)	Dhfr	5	DHFR	5q11.2-q13.2	G			46
	49.0	Hmgcr	5	HMGCR	5q13.3-q14	R	WI-7171	79-82	46
	50.0	As1	5	ARSB	5p11-q13				46
	50.0	PIK3R1	5	PIK3R1	5q12-q13				46
b	50.0	Map1b	5	MAP1B	5q13	R,G	SHGC-10005	74-79	46
b	51.0	Crhbp	5	CRHBP	5				46
b	52.0	Hexb	5	HEXB	5q13	G			46
	55.0	Cspg2	5	CSPG2	5q12-q13				46
	56.0	Ccnb1-rs1	5	CCNB1	5q13-qter				46
a, b	58.0	Htr1a	5	HTR1A	5q11-q14				46
a, b	64.0	Ctla3	5*	CTLA3	5q11-q12				49
b	64.0	Itga2	5*	ITGA2	5q23-q31				49
b	65.0	Itga1	5*	ITGA1	5				49
	67.0	Etfa	15	ETFA	15q23-q25				138

Human/Mouse Homology Mapping Methods

Method	Description
C	High-resolution cytogenetic methods
G	Genetic linkage mapping
G*	Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L	Long-range restriction site mapping
P	Multiple physical methods, including YAC and cosmid contigs
R	Radiation hybrid mapping
X	Multiple sources of high-resolution data

Gene Notes:

Key	Description
a	Gene Bank Accession Number for Mouse EST
b	Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g	Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y	Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p	Different sources of high resolution mapping data give conflicting positions
r	Difference between position in inbred mice vs. Mus spretus
u	This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map

Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.
1	2	3	4	5	6
7	8	9	10	11	12
13	14	15	16	17	18
19	X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.