NCBI GenBank

Mouse To Human Homology Region Map, Chromosome 11

How to use this Resource

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group
b 1.0 Lif 22 LIF 22q12 R,X stLIF 23-24 190
1.0 Nf2 22 NF2 22q12.2 X 190
b 1.0 Camk2b 22 CAMK2B 22q12 190
1.0 Osm 22 OSM 22q12 190
3(g) Tcn2 22 TCN2 22q12 R,X SHGC-12522 22-25 190
5(g) Nfh 22 NFH 22q12.1-q13.1 190
c 2.0 Igfbp1 7 IGFBP1 7p13-p12 P,R M31145 64-73 74
2.0 Igfbp2 7 IGFBP2 7p13-p12 74
S Adcy1 7 ADCY1 7p12-p12 74
c 5.0 Gk 7 GCK 7p P 74
6.0 Ikaros 7 IKAROS 7p11.1-p13 74
7.0 Ddc 7 DDC 7p12.3-12.1 P 74
a, b 9.0 Egfr 7 EGFR 7p12 P,G* stSG3678 74-76 74
11.0 Meis1 2 MEIS1 2p23-p12 11
11.0 Mor2 2 MDH1 2p16 R SHGC-31543 84-88 11
13.0 Otx1 2 OTX1 2p13 11
13.0 Spnb2 2 SPTBN1 2p21 11
b 13.0 Rel 2 REL 2p13-p12 R SGC35444 84-85 11
11.0 Rab1 2 RAB1 2 R WI-13176 89-91 11
16.0 Hba 16 HBA1 16p13.3 R 141
16.0 Mpg 16 MPG 16p13.3 R 141
14.8(g) Ebf(g) 5 EBF 5q34 55
19.0 Gabra1 5 GABRA1 5q34-q35 G,R,L WI-7010 161-163 55
19.0 Gabrg2 5 GABRG2 5q31.1-q33.1 R,L 55
a, b 19.0 Adra1 5 ADRA1 5q32-q34 R,L 55
19.0 Hmmr 5 HMMR 5q33.2-qter 55
19.0 Il12b 5 IL12B 5q21.1-q33.1 55
23.0 Gabra6 5 GABRA6 5q31.1-q35 55
27.0 Itk 5* ITK 5q31-q32 51
28.0 Il5 5* IL5 5q23-q31 R SHGC-12343 132-137 51
28.0 Il4 5* IL4 5q23-q31 G 51
b, c 29.0 Csfgm 5* CSF2 5q23-q31 51
a, b 29.0 Il3 5* IL3 5q23-q31 R,G SHGC-12756 132-137 51
29.0 Irf1 5* IRF1 5q23-q31 R,G WI-7178 135-140 51
a, b 29.0 Il13 5* IL13 5q31 R SHGC-12786 132-140 51
a 29.0 Tcf7 5* TCF7 5q31.1 R SGC35448 131-134 51
a 29.0 Glra1 5 GLRA1 5q32 R,L 54
b 30.0 Sparc 5 SPARC 5q31-q33 R,L,G WI-8314 152-156 54
29(g) Anx6(g) 5 ANX6 5q32-34 R,L 54
S Flt4 5 FLT4 5q34-q35 54
a 31.0 Gria1 5 GRIA1 5q33 54
31.0 Glr1 5 GRM1 5q33 54
31.0 Mgat1 5 MGAT1 5 54
31.0 Tceb1l 5 TCEB1L 5q31 54
32.0 Gm2a 5 GM2A 5q32-q33 54
30(g) Canx 5* CANX 5q35 R M94859 182-195 57
33.0 Ahd3 17 ALDH3 17 147
33.0 Llglh 17 LLGL 17p11.2 147
33.0 Pmp22 17 PMP22 17p12-p11.2 R WI-9003 37-44 147
35.0 Myhse 17 MYH3 17pter-p11 147
35.0 Shbg 17 SHBG 17p13-p12 147
b 35.0 Myhsf1 17 MYH1 17pter-p11 R,G SGC32450 16-18 147
35.0 Rcvrn 17 RCVRN 17p13-p12 147
b 35.0 Myhsf2 17 MYH2 17p13.1 147
37.0 Rpo2-1 17 POLR2A 17p13.1 G 147
37.0 Asgr1 17 ASGR1 17p13-p11 R stSG1426 16-18 147
37.0 Asgr2 17 ASGR2 17p13-p11 147
a, b 39.0 Trp53 17 TP53 17p13.1 R,G WI-9178 14-18 147
40.0 Atp1b2 17 ATP1B2 17p R stSG77 14-18 147
40.0 Alox 17 ALOX 17 R SHGC-12725 14-18 147
b 40.0 Acrb 17 CHRNB 17p12-p11 R IB1796 16-18 147
40.0 Myhn2 17 Myhn2 17 R SHGC-12899 16-18 147
b 40.0 Glut4 17 GLUT4 17p13 G 147
b 41.0 Zfp3 17 ZFP3 17pter-p12 147
S Pfn1 17 PFN1 17p13.3 147
S Syb2 17 SYB2 17pter-p12 147
S Crko 17 CRK 17p13 147
43.0 D11Bay2 17 D17S28 17p13.3 G 147
43.7 Mdsh 17 MDCR 17p13.3 147
a 44.0 Arrb2 17 ARRB2 17p13 147
46(g) Pitpn 17 PITPN 17p13.3 147
44.0 Tcf2 17* TCF2 17q11.2-q12 148
45.0 Vtn 17* VTN 17q11 148
a 42(g) Htt 17* SCL6A4 17q11.2-q12 148
45.0 Esa 17* M17S1 17q11-q12 148
a, b, c 46.0 Nos2 17* NOS2 17q11.2-q12 148
b 46.0 Nf1 17* NF1 17q11.2 R,G SHGC-9859 50-53 148
46.0 Evi2 17* EVI2A 17q11.2 R,G M60830 48-53 148
b 46.0 Cryba1 17* CRYB1 17q11.2-q12 G 148
47.0 Scya1 17* SCYA1 17 148
46.5 Scya2 17* SCYA2 17q11.2-q21.1 148
48.0 Scya4 17* SCYA4 17q11.2-q12 148
48.0 Scya3 17* SCYA3 17q11.2-q12 148
S Scya5 17* SCYA5 17q11.2-q12 148
46(g) Fert2 5 FER 5q21 50
a 46(g) Ube2b 5 UBE2B 5q23-q31 50
49.0 Tbx2 17 TBX2 17q21-q22 150
49.0 Sfrs1 17 SFRS1 17q21.3-q22 150
b 49.0 Mpo 17 MPO 17q21.2-q23 R,G WI-6053 75-83 150
a 45.1(g) Tnfaip1 17 TNFAIP1 17q22-q23 150
50.5 Nog 17 NOGGIN 17q22 150
b 52.0 Hlf 17 HLF 17 150
b 56.0 HoxB 17 HOXB1 17q21-q22 G 150
56.0 Hoxb3 17 HOXB3 17q21-q22 150
56.0 Hoxb4 17 HOXB4 17q21-q22 150
56.0 Hoxb5 17 HOXB5 17q21-q22 R R33007 65-69 150
56.0 Hoxb6 17 HOXB6 17q21-q22 G 150
c 56.0 Hoxb7 17 HOXB7 17q21-q22 150
56.0 Hoxb8 17 HOXB8 17q21-q22 150
56.0 Hoxb9 17 HOXB9 17q21-q22 150
b 56.0 Ngfr 17 NGFR 17q21-q22 G 150
b 56.0 Cola1 17 COL1A1 17q21.3-q22 G 150
57.0 Thra 17* THRA1 17q11.2-q12 R,G SHGC-10762 62 149
a, b 57.0 Top2a 17* TOP2A 17q21-q22 R WI-7251 62-65 149
b, c 57.0 Csfg 17* CSF3 17q11.2-q12 R X03438 53-65 149
a, b 57.0 Erbb2 17* ERBB2 17q11.2-q12 149
57.0 Nfe2l1 17* NFE2L1 17q22 149
a, b 57.0 Rara 17* RARA 17q12 G 149
58.0 Krt1.14 17* KRT14 17q21-q23 R SGC35551 53-62 149
58.0 Krt10 17* KRT10 17q12-q21 R SHGC-9767 62 149
58.0 Krt19 17* KRT19 17q21-23 149
58.0 Krt15 17* KRT15 17q21-q23 R H21366 53-62 149
58.0 Meox1 17* MEOX1 17q21 R SGC35253 62-65 149
58.0 Grn 17* GRN 17 149
60.0 Jup 17* JUP 17q21 149
60.0 Pea3 17* ETV4 17q21 149
60.5 Brca1 17* BRCA1 17q21 149
b 60.0 Cnp1 17* CNP 17q21 149
61.0 Hlr1 17* HLR1 17q24-qter 149
b 62.0 Gfap 17* GFAP 17q21 149
S Phb 17* PHB 17q21 149
62.0 Empb3 17* EPB3 17q21-q22 149
62.0 Ae 17* AE1 17q12-q21 149
62.0 Crhr 17* CRHR 17 R SHGC-12889 64-74 149
63.0 Ddx5 17* Ddx5 17q24-qter 149
63.0 Plcd3 17* PLCD3 17 149
b 63.0 Wnt3 17* WNT3 17q21-q22 149
a 63.0 Cdc27 17* CDC27 17 149
b 65.0 Ace 17* ACE1 17q23 149
65.0 Cyb561 17* CYB561 17q11-qter 149
b 65.0 Myla 17* MYL4 17q 149
65.0 Gh 17* GH1 17q22-24 G 149
a, b 68.0 Itgb3 17* ITGB3 17q12-q21 149
a 68.0 Itga2b 17* ITGA2B 17q21.3 R WI-7066 62-74 149
63(g) Apoh 17 APOH 17q23-qter R,G stSG1402R 84-87 152
64(g) Scn4a 17 SCN4A 17q23.1-q25 152
63(g) Icam2 17 ICAM2 17q23-q25 R SHGC-10741 82-84 152
S Zfp147 17* ZFP147 17q21.3-q22 149
a, b 68.0 Pkca 17 PRKCA 17q22-q24 R,G SHGC-10754 84-94 152
S Vpp1 17 ATP6N1 17q21-qter 152
69.5 Sox9 17 SOX9 17q24.3-q25.1 152
72.0 Fasn 17 FASN 17q25 152
a 72.0 Timp2 17 TIMP2 17q25 152
73.0 Sfrs2 17 SFRS2 17q25 152
74.0 Gaa 17 GAA 17q23 152
a 74.0 Cd7 17 CD7 17q25 152
75.0 Grb2 17 GRB2 17q24-q25 R M96995 94-104 152
75.0 Pdeg 17 PDEG 17q21.1 152
75.0 Cbx2 17 CBX2 17q25 152
b 76.0 Itgb4 17 ITGB4 17q25.1-q25.5 R X52186 94-104 152
78.0 Glk 17 GALK1 17q23-q25 152
78.0 Grn2x 17 GRIN2C 17q25 152
78.0 Tk1 17 TK1 17q23-q25 G 152
b 80.0 P4hb 17 P4HB 17q25 152
S Tse1 17 TSE1 17q23-q24 152
S Umph2 17 UMPH2 17q23.2-q25.3 152

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Human Chr. Human Chr. Human Chr. Human Chr. Human Chr. Human Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.