Mouse To Human Homology Region Map, Chromosome 1

Mouse To Human Homology Region Map, Chromosome 1

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group

a 5.5 Oprk1 8 OPRK1 8q11.2 86

a 15.0 Col9a1 6 COL9A1 6q12-q14 63

b 16.5 Dst 6 BPAG1 6p12-p11 63

b 19.5 Il1r1 2 IL1R1 2q12 R SGC35324 115-120 13

19.5 Il1r2 2 IL1R2 2 R WI-11083 115-118 13

20.4 Slc9a2 2 SLC9A2 2 13

20.4 Slc9a4 2 SLC9A4 2 13

20.6 St2 2 ST2 2 R SHGC-10948 115-118 13

a 21.1 Col3a1 2* COL3A1 2q31-q32.3 R WI-7548 194-196 19

a, b 22.9 Gls 2* GLS 2q32-q34 19

27.1 Inpp1 2* INPP1 2 R WI-9155 196-201 19

28.0 Stat4 2* STAT4 2 R R91570 196 19

23.2g Aox1 2* AOX1 2 R WI-9291 200-206 19

26.5(g) Xpg 13 Xpg 13q32.3-q33.1 R A008L48 87-95 129

29.8 Idh1 2 IDH1 2q32-qter 20

a, c 30.1 Ctla4 2 CTLA4 2q33 20

a 30.1 Cd28 2 CD28 2q33 R WI-7843 200-206 20

b 31.0 Creb1 2 CREB1 2q32-q34 R WI-8988 210-215 20

a, b 32.0 Cryga 2 CRYG1 2q33-q35 G 20

32.0 Crygd 2 CRYGD 2q33-q35 20

b 33.7 Mtap2 2 MAP2 2q34-q35 R WI-14008 210-215 20

a 34.1 Mylf 2 MYL1 2q33-q34 R WI7607 210-215 20

a, b 36.1 Fn1 2 FN1 2q34 R WI-8999 217-222 20

36.1 Igfbp5 2 IGFBP5 2q33-q36 R SGC31996 217-222 20

a, b 38.4 Tnp1 2 TNP1 2q34 R WI-7087 217-222 20

39.2 Nramp 2 NRAMP 2q35 20

40.0 Il8rb 2 IL8RB 2q35 R SHGC-12787 209-220 20

40.7 Igfbp2 2 IGFBP2 2q33-q34 20

a, b 40.8 Vil 2 VIL1 2q35 R SHGC-12381 209-220 20

41.1 Des 2 DES 2q35 20

a, b 41.6 Inha 2 INHA 2q33-q34 20

44.0 Pax3 2 PAX3 2q36 R WI-7962 228-230 20

48.4 Ncl 2 NCL 2q12-qter 20

a 51.7 Akp3 2 ALPI 2q37.1 R WI-8984 242-248 20

51.7 Ugt1a1 2 UGT1A1 2q37 20

a, b 52.3 Acrg 2 CHRNG 2q32-qter 20

52.3 Acrd 2 CHRND 2q36-q37 20

a 53.6 Sag 2 SAG 2q37.1 20

b 53.9 Col6a3 2 COL6A3 2q37.3 20

54.4 Sp 2 WS1 2q37 20

55.3 Hdlbp 2 HDLBP 2q37 R stSG314 258-272 20

S Cyp27 2 CYP27 2q33-qter 20

a 59.0 W49948(a) 2 10196(u) 2 R Cda11f08 >272 20

c 56.7 Pam 5 PAM 5q14-5q21 47

a, b 59.8 Bcl2 18 BCL2 18q21.3 R SHGC-12395 89-94 158

b 61.1 Planh2 18 PAI2 18q22.1 R M24657 96-102 158

b 64.1 Inhbb 2* INHBB 2cen-q13 R stSG19 129-134 16

a, b 64.1 En1 2* EN1 2q13-q21 16

c 63.0 Htr5b 2* HTR5B 2q11-13 16

a 67.6 C4bp 1 C4BP 1q32 R,P SHGC-9971 224-232 5

a 67.6 Daf 1 DAF 1q32 R,P,G SHGC-11123 224-228 5

b 69.9 Il10 1 IL10 1 5

69.9 Cchl1a3 1 CACNL1A3 1q32 R SHGC-11068 218-219 5

S Qprs 1 EPRS 1q32 5

a, b 69.9 Ren 1 REN 1q32 or 1q41 G 5

a 70.3 Atp2b2 1 ATP2B2 1q25-q32 5

71.0 Pep3 1 PEPC 1q25 5

b 72.3 Myog 1 MYOG 1q31-q41 5

73.5 Syt2 1 SYT2 1q 5

a, b 74.1 Ptprc 1 PTPRC 1q31-32 5

a 74.1 Cfh 1 HF1 1q32 R SGC31488 213-216 5

76.1 Ncf2 1 NCF2 1cen-q32 R stSG402 204-208 5

76.2 Ptgs2 1 PTGS2 1q25.2-q25.3 R WI-7142 205-208 5

80.1 Lamc2 1 LAMC2 1q31 5

a, b 81.1 Lamc1 1 LAMC1 1q31 R,G WI-8057 199-203 5

81.6 Acact 1 SOAT 1q25 5

a 82.1 Abll 1 ABLL 1q24-q25 5

a, b, P 84.6 At3 1 AT3 1q23-q25.1 R,P,G atSG1405 197-199 5

a, b, P 84.9 Ox40l 1 OX40L 1q23 R,P WI-7792 193-197 5

a, P 85.0 Fasl 1 APT1LG1 1q23 R,P SHGC-11872 193-196 5

a, b, P 86.6 Sele 1 SELE 1q22-q25 R,P M30640 186-193 5

a, P 86.6 Sell 1 SELL 1q21-q25 R,P WI-7045 187-193 5

a, P 86.6 Selp 1 SELP 1q21-q25 P SHGC-17253 186-193 5

a, P 86.6 Cf5 1 F5 1q21-q25 R,P M14335 186-193 5

a, P 86.8 Atp1b1 1 ATP1B1 1q22-q25 P 5

87.0 Lptn 1 LPTN 1 R SGC35495 187-193 5

a, P 87.2 Cd3z 1 CD3z 1q22-q25 R,P J04132 183-186 5

a, b, P 87.2 Pou2f1 1 POU2F1 1q22-q25 P 5

a, b 88.1 Pbx1 1 PBX1 1q23-q25 P 5

a 88.1 Rxrg 1 RXRG 1q23-25 R,P WI-15938 173-181 5

90.0 Syt2 1 SYT2 1q 5

a, P 92.3 Fcgr3 1 FCGR3A,B 1q21-q23 R,P,G stSG71 173-181 5

a, P 92.3 Fcgr2 1 CD32 1q21-23 R,P SGC35267 173-181 5

a, P 92.4 Mpp 1 MPZ 1q21-q23 P 5

a, c, P 92.6 Apoa2 1 APOA2 1q21-q23 R,P,G SHGC-017 175-179 5

a, P 93.3 Fcer1g 1 FCER1G 1q23 R,P SHGC-12422 175-179 5

S Usf1 1 USF1 1q22-q23 5

a, P 93.3 Cd48 1 CD48 1q21.3-q22 R,P WI-8971 170-173 5

a, P 93.3 Ly9 1 LY9 1q21.3-q22 P 5

93.4 Nhlh1 1 NHLH1 1q22 5

93.5 Usf1 1 USF1 1q21-q23 5

a, P 94.2 Atp1a2 1 ATP1A2 1q21-q22 R,P,G SGC31641 170-173 5

a, P 94.2 Fcer1a 1 FCER1A 1q21-q23 R,P SHGC-12658 170-181 5

a, P 94.2 Sap 1 APCS 1q21-q23 R,P SHGC-10941 170-172 5

a, P 94.2 Crp 1 CRP 1q21-q23 R,P,G M11725 170-173 5

a, b, P 95.2 Spna1 1 SPTA1 1q21-23 R,P,G SHGC-9827 159-170 5

a 98.5 Eph1 1* EPHX 1p11-qter 6

a 98.5 Adprp 1* ADPRT 1q41-q42 R,G SGC30345 246-249 6

99.7 Chml 1* CHML 1q31-qter 6

a, b 101.5 Tgfb2 1* TGFB2 1q41 R WI-7576 242-246 6

b 101.5 Hlx 1* HLX1 1q41-q42.1 R SHGC-31006 235-237 6

104.0 Lamb3 1* LAMB3 1q32 6

a, P 106.6 Cd34 1* CD34 1q32 R,P WI-7685 225-232 6

a 106.6 Crry 1* CR1 1q32 R,P,G X14358 224-232 6

a, P 106.6 Cr2 1* CR2 1q32 R,P,G M26021 224-232 6

Cross	Mouse Locus	Mouse Gene	Human Chr.	Human Gene	In Situ	Method	RH Map	Genethon Map	Homology Group
a	5.5	Oprk1	8	OPRK1	8q11.2				86
a	15.0	Col9a1	6	COL9A1	6q12-q14				63
b	16.5	Dst	6	BPAG1	6p12-p11				63
b	19.5	Il1r1	2	IL1R1	2q12	R	SGC35324	115-120	13
	19.5	Il1r2	2	IL1R2	2	R	WI-11083	115-118	13
	20.4	Slc9a2	2	SLC9A2	2				13
	20.4	Slc9a4	2	SLC9A4	2				13
	20.6	St2	2	ST2	2	R	SHGC-10948	115-118	13
a	21.1	Col3a1	2*	COL3A1	2q31-q32.3	R	WI-7548	194-196	19
a, b	22.9	Gls	2*	GLS	2q32-q34				19
	27.1	Inpp1	2*	INPP1	2	R	WI-9155	196-201	19
	28.0	Stat4	2*	STAT4	2	R	R91570	196	19
	23.2g	Aox1	2*	AOX1	2	R	WI-9291	200-206	19
	26.5(g)	Xpg	13	Xpg	13q32.3-q33.1	R	A008L48	87-95	129
	29.8	Idh1	2	IDH1	2q32-qter				20
a, c	30.1	Ctla4	2	CTLA4	2q33				20
a	30.1	Cd28	2	CD28	2q33	R	WI-7843	200-206	20
b	31.0	Creb1	2	CREB1	2q32-q34	R	WI-8988	210-215	20
a, b	32.0	Cryga	2	CRYG1	2q33-q35	G			20
	32.0	Crygd	2	CRYGD	2q33-q35				20
b	33.7	Mtap2	2	MAP2	2q34-q35	R	WI-14008	210-215	20
a	34.1	Mylf	2	MYL1	2q33-q34	R	WI7607	210-215	20
a, b	36.1	Fn1	2	FN1	2q34	R	WI-8999	217-222	20
	36.1	Igfbp5	2	IGFBP5	2q33-q36	R	SGC31996	217-222	20
a, b	38.4	Tnp1	2	TNP1	2q34	R	WI-7087	217-222	20
	39.2	Nramp	2	NRAMP	2q35				20
	40.0	Il8rb	2	IL8RB	2q35	R	SHGC-12787	209-220	20
	40.7	Igfbp2	2	IGFBP2	2q33-q34				20
a, b	40.8	Vil	2	VIL1	2q35	R	SHGC-12381	209-220	20
	41.1	Des	2	DES	2q35				20
a, b	41.6	Inha	2	INHA	2q33-q34				20
	44.0	Pax3	2	PAX3	2q36	R	WI-7962	228-230	20
	48.4	Ncl	2	NCL	2q12-qter				20
a	51.7	Akp3	2	ALPI	2q37.1	R	WI-8984	242-248	20
	51.7	Ugt1a1	2	UGT1A1	2q37				20
a, b	52.3	Acrg	2	CHRNG	2q32-qter				20
	52.3	Acrd	2	CHRND	2q36-q37				20
a	53.6	Sag	2	SAG	2q37.1				20
b	53.9	Col6a3	2	COL6A3	2q37.3				20
	54.4	Sp	2	WS1	2q37				20
	55.3	Hdlbp	2	HDLBP	2q37	R	stSG314	258-272	20
	S	Cyp27	2	CYP27	2q33-qter				20
a	59.0	W49948(a)	2	10196(u)	2	R	Cda11f08	>272	20
c	56.7	Pam	5	PAM	5q14-5q21				47
a, b	59.8	Bcl2	18	BCL2	18q21.3	R	SHGC-12395	89-94	158
b	61.1	Planh2	18	PAI2	18q22.1	R	M24657	96-102	158
b	64.1	Inhbb	2*	INHBB	2cen-q13	R	stSG19	129-134	16
a, b	64.1	En1	2*	EN1	2q13-q21				16
c	63.0	Htr5b	2*	HTR5B	2q11-13				16
a	67.6	C4bp	1	C4BP	1q32	R,P	SHGC-9971	224-232	5
a	67.6	Daf	1	DAF	1q32	R,P,G	SHGC-11123	224-228	5
b	69.9	Il10	1	IL10	1				5
	69.9	Cchl1a3	1	CACNL1A3	1q32	R	SHGC-11068	218-219	5
	S	Qprs	1	EPRS	1q32				5
a, b	69.9	Ren	1	REN	1q32 or 1q41	G			5
a	70.3	Atp2b2	1	ATP2B2	1q25-q32				5
	71.0	Pep3	1	PEPC	1q25				5
b	72.3	Myog	1	MYOG	1q31-q41				5
	73.5	Syt2	1	SYT2	1q				5
a, b	74.1	Ptprc	1	PTPRC	1q31-32				5
a	74.1	Cfh	1	HF1	1q32	R	SGC31488	213-216	5
	76.1	Ncf2	1	NCF2	1cen-q32	R	stSG402	204-208	5
	76.2	Ptgs2	1	PTGS2	1q25.2-q25.3	R	WI-7142	205-208	5
	80.1	Lamc2	1	LAMC2	1q31				5
a, b	81.1	Lamc1	1	LAMC1	1q31	R,G	WI-8057	199-203	5
	81.6	Acact	1	SOAT	1q25				5
a	82.1	Abll	1	ABLL	1q24-q25				5
a, b, P	84.6	At3	1	AT3	1q23-q25.1	R,P,G	atSG1405	197-199	5
a, b, P	84.9	Ox40l	1	OX40L	1q23	R,P	WI-7792	193-197	5
a, P	85.0	Fasl	1	APT1LG1	1q23	R,P	SHGC-11872	193-196	5
a, b, P	86.6	Sele	1	SELE	1q22-q25	R,P	M30640	186-193	5
a, P	86.6	Sell	1	SELL	1q21-q25	R,P	WI-7045	187-193	5
a, P	86.6	Selp	1	SELP	1q21-q25	P	SHGC-17253	186-193	5
a, P	86.6	Cf5	1	F5	1q21-q25	R,P	M14335	186-193	5
a, P	86.8	Atp1b1	1	ATP1B1	1q22-q25	P			5
	87.0	Lptn	1	LPTN	1	R	SGC35495	187-193	5
a, P	87.2	Cd3z	1	CD3z	1q22-q25	R,P	J04132	183-186	5
a, b, P	87.2	Pou2f1	1	POU2F1	1q22-q25	P			5
a, b	88.1	Pbx1	1	PBX1	1q23-q25	P			5
a	88.1	Rxrg	1	RXRG	1q23-25	R,P	WI-15938	173-181	5
	90.0	Syt2	1	SYT2	1q				5
a, P	92.3	Fcgr3	1	FCGR3A,B	1q21-q23	R,P,G	stSG71	173-181	5
a, P	92.3	Fcgr2	1	CD32	1q21-23	R,P	SGC35267	173-181	5
a, P	92.4	Mpp	1	MPZ	1q21-q23	P			5
a, c, P	92.6	Apoa2	1	APOA2	1q21-q23	R,P,G	SHGC-017	175-179	5
a, P	93.3	Fcer1g	1	FCER1G	1q23	R,P	SHGC-12422	175-179	5
	S	Usf1	1	USF1	1q22-q23				5
a, P	93.3	Cd48	1	CD48	1q21.3-q22	R,P	WI-8971	170-173	5
a, P	93.3	Ly9	1	LY9	1q21.3-q22	P			5
	93.4	Nhlh1	1	NHLH1	1q22				5
	93.5	Usf1	1	USF1	1q21-q23				5
a, P	94.2	Atp1a2	1	ATP1A2	1q21-q22	R,P,G	SGC31641	170-173	5
a, P	94.2	Fcer1a	1	FCER1A	1q21-q23	R,P	SHGC-12658	170-181	5
a, P	94.2	Sap	1	APCS	1q21-q23	R,P	SHGC-10941	170-172	5
a, P	94.2	Crp	1	CRP	1q21-q23	R,P,G	M11725	170-173	5
a, b, P	95.2	Spna1	1	SPTA1	1q21-23	R,P,G	SHGC-9827	159-170	5
a	98.5	Eph1	1*	EPHX	1p11-qter				6
a	98.5	Adprp	1*	ADPRT	1q41-q42	R,G	SGC30345	246-249	6
	99.7	Chml	1*	CHML	1q31-qter				6
a, b	101.5	Tgfb2	1*	TGFB2	1q41	R	WI-7576	242-246	6
b	101.5	Hlx	1*	HLX1	1q41-q42.1	R	SHGC-31006	235-237	6
	104.0	Lamb3	1*	LAMB3	1q32				6
a, P	106.6	Cd34	1*	CD34	1q32	R,P	WI-7685	225-232	6
a	106.6	Crry	1*	CR1	1q32	R,P,G	X14358	224-232	6
a, P	106.6	Cr2	1*	CR2	1q32	R,P,G	M26021	224-232	6

Human/Mouse Homology Mapping Methods

Method	Description
C	High-resolution cytogenetic methods
G	Genetic linkage mapping
G*	Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L	Long-range restriction site mapping
P	Multiple physical methods, including YAC and cosmid contigs
R	Radiation hybrid mapping
X	Multiple sources of high-resolution data

Gene Notes:

Key	Description
a	Gene Bank Accession Number for Mouse EST
b	Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g	Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y	Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p	Different sources of high resolution mapping data give conflicting positions
r	Difference between position in inbred mice vs. Mus spretus
u	This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map

Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.
1	2	3	4	5	6
7	8	9	10	11	12
13	14	15	16	17	18
19	X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.