NCBI GenBank

Human to Mouse Homology Region Map, Chromosome X

How to use this Resource

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group
Xp22.32 IL3RA 14 Il3ra 1.3 b 193
Xp22.32 CSF2RA 19 Csfgmra 51.0 b 194
WI-14685 13-17 R,P Xp22.32 STS XY Sts 73.5 c 195
Xp22.31 CLCN4 X® Clc4-1 73.5 195
P Xp22.31-p22.1 AMELX X Amel 72.5 a, c 195
P Xp22.3-p22.2 PRPS2 X Prps2 72.0 195
P Xp22.2-p22.1 PHKA2 X Phka2 71.5 195
P Xp22.1-p21.3 GLRA2 X Glra2 71.5 a 195
Xp22.3-p21.1 NHS X Xcat 68.0 195
P Xp22.1 PIGA X Piga 67.0 a 195
P Xp11.22-cen GRPR X Grpr 70(g) 195
P,G Xp22.1 PDHA1 X Pdha1 66.0 195
Xp22.2-p22.1 HYP X Hyp 65.0 195
Xp22.3 APXL X Apxl 64.5 195
SGC31598 17-21 R Xp22.3 OA1 X Oa1 64.5 195
P Xp22.1-p21.3 POLA X Pola1 34.0 196
P Xp22.1 ZFX X Zfx 34.6 196
Xp22 PHK X Phk 34.7 196
Xp21.3 AHC X Ahc 32.8 196
Xp21.2 GYK X Gyk 32.5 196
WI-9121 41-46 R,G Xp21.3-p21.2 DMD X Dmd 32.0 196
Cda0hh12 46-68 R Xp21.1-Xp11.4 XK X* Xkh 2.6 197
P Xp21.1 CYBB X* Cybb 2.8 197
WI-9177 47-56 R,P,G Xp21.1 OTC X* Otc 3.0 197
Xp22-p11 DXS32 X* DXHXS32 3.5 197
Xp21.1-p11.3 DXS676 X* DXHXS676 3.5 197
P,G Xp11.4-p11.3 MAOB X* Maob 5.2 197
SHGC-11177 68-77 R,P Xp11.4-p11.3 MAOA X* Maoa 5.2 197
SHGC-12355 68-77 R Xp11.4-p11,2 NDPH X* Ndph 5.3 197
P Xp11.23 UBE1 X* Ube1x 5.4 b 197
SGC30176 68-82 R,P Xp11.3-p11.23 ARAF1 X* Araf 6.2 b 197
P Xp11.23 SYN1 X* Syn1 6(g) 197
P,G Xp11.3-p11.23 TIMP1 X* Timp 6.2 197
P,G Xp11.3-p11.23 PFC X* Pfc 6.2 197
P Xp11.3-p11.23 ELK1 X* Elk1 6.2 a 197
Xp11.21 DXF34S1 X DXHXF34 0.5 198
X06389 68-77 R,P,G Xp11.23-p11.22 SYP X Syp 1.4 198
Xp11.1 CLCN5 X Clc5 0.8 198
SGC32925 68-82 R,P,G Xp11.22 TFE3 X Tcfe3 1.6 198
P Xp11.23 GATA1 X Gata1 1.8 198
Xp11.21 FGDY X* Fgd1 63.5 199
Xp11.22-p11.21 DXS1272E X* Smcx 64.0 199
P Xp11.22-p11.21 DXS679 X* DXHXS679 65.0 199
P Xp11.22-p11.21 DXS674 X* DXHXS674 65.0 199
P Xp11.21 ALAS2 X* Alas2 63(g) 199
P Xq11.2q12 MSN X* Msn S 199
WI-9096 84-90 R,P,G Xq11.2-q12 AR X Ar 36.2 b 200
P Xq12-q13.1 EDA X Ta 37.0 200
D11086 87-97 R,P Xq13.1 IL2RG X Il2rg 37.5 200
P Xq13.1 GJB1 X Gjb1 37.5 b 200
P,G Xq13.1 CCG1 X Ccg1 38.0 200
P Xq13.1 RPS4X X Rps4x 38.5 200
P Xq13.1 PHKA1 X Phka1 39.0 200
Xq13-q24 DXS393 X DXHXS393 41.0 200
P Xq13.2 XIC X Xce 42.3 200
A006G16 94-97 R,P Xq13.2 XIST X Xist 42.0 200
Xq13.3 DXS6677E X Xnp 44.3 200
P Xq13.2-q13.3 ATP7A X Atp7a 44.4 200
D29018 94-97 R,P,G Xq13.3 PGK1 X Pgk1 44.8 b 200
P Xq21.33-q22 BTK X Btk 51.5 b 200
X05790 112-121 R,P Xq21.3-q22 GLA X Ags 53.0 200
P Xq21.33-q22 DXS178 X DXHXS178 57(g) 200
P Xq22 DXS101 X DXHXS101 55.0 200
P Xq21.33-q22 PLP X Plp 56.0 b 200
Xq21-q27 PRPS1 X Prps1 60.0 200
WI-7137 121-139 R Xq22 COL4A5 X Col4a5 62.0 200
Xq22-q23 AGTR2 X* Agtr2 12.0 201
WI-9475 121-139 P Xq24 LAMP2 X* Lamp2 12.0 201
Xq24-q25 ANT2 X* Ant2 14.0 201
Xq24 HTR1C X* Htr1c S 201
P Xq26.1 HPRT X* Hprt 17.0 b 201
P Xq26.2 DXS144E X* DXHXS144E 21.0 201
L07414 150-153 R,P Xq26 CD40L X* Cd40l 18(g) b 201
M11309 155 R,P,G Xq26.3-q27.1 F9 X* Cf9 22.0 201
P Xq26.3-q27.1 MCF2 X* Mcf2 22.5 201
P Xq27.1-q27.2 CDR1 X* Cdr 23.5 201
P Xq27.3 FMR1 X* Fmr1 24.5 201
P Xq27.3-q28 DXS296 X* DXHXS296 24.5 201
SHGC-11149 187 R,P,G Xq27.3-q28 IDS X* Ids 27.0 201
P Xq28 GABRA3 X* Gabra3 28.5 201
Xq28 CALT X* Calt 28.9 201
P Xq28 DXS1104 X* DXHXS1104 28.0 201
X CDPX2 X* Bpa 29.0 201
P Xq28 DXS52 X* DXHXS52 29.0 201
WI-12360 187-190 R Xq28 F8A X* F8a 29.1 201
P Xq28 BGN X* Bgn 29.3 201
Xq28 CREAT X* Creat 29.5 201
Xq28 ALD X* Aldgh 29.5 201
P Xq28 LICAM X* Licam 29.5 201
P Xq28 AVPR2 X* Avpr2 29.5 201
D10232 >190 R Xq28 RENBP X* Renbp 29.5 201
Xq28 HCFC1 X* Hcfc1 29.5 201
X MECP2 X* Mecp2 29.6 201
P Xq28 RCP X* Rsvp 29.7 201
P Xq28 FLN1 X* Fln1 29.8 c 201
Xq28 EMD X* Emd 29.8 201
Xq28 GD1 X* Gdi1 29.8 201
P Xq28 DXS254E X* DXHXS254E 30.0 201
P Xq28 DXS253E X* DXHXS253E 30.0 201
P Xq28 G6PD X* G6pd 30.0 a 201
P,G Xq28 F8C X* Cf8 30.5 201
Xq27-qter DXS120 X* DXHXS120 32.0 201

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 20 21 22 X

The asterisk character ('*') is used to indicate a different region of homology on the same mouse chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.