NCBI GenBank

Human to Mouse Homology Region Map, Chromosome 7

How to use this Resource

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group
SHGC-10715 <1 R,X 7p22 PDGFA 5 Pdgfa 84.0 a, b 68
7pter-p22 PRKAR1B 5 Prkar1b 84.0 68
WI-16837 7-10 R,X 7p22 PMSL2 5 Pms2 85.0 68
SHGC-12960 10-21 X 7p22.1-p21.3 MEOX2 12 Meox2 20.0 69
SHGC-12907 10-29 X 7p21 AHR 12 Ahr 18.0 69
SHGC-9784 36-39 P,R,G 7p21-p15 IL6 5* Il6 17.0 a, b 70
P 7pter-q22 NPY 6 Npy 22.0 71
7pter-p14 GCTG 6 Ggc 26.0 a 71
SGC356668 38-40 P,R 7p15-p14 HOXA1 6 Hoxa 26.3 b 71
7p15-p14 HOXA4 6 Hoxa4 26.3 71
7p15-p14 HOXA5 6 Hoxa5 26.3 71
7p15-p14 HOXA6 6 Hoxa6 26.3 71
7p15-p14 HOXA7 6 Hoxa7 26.3 71
U41813 40-42 R 7p15-p14 HOXA9 6 Hoxa9 26.3 71
7p15-p14 HOXA10 6 Hoxa10 26.3 71
SGC33814 38-40 R 7p15-p14 HOXA11 6 Hoxa11 26.3 71
P 7p15-p14 EVX1 6 Evx1 26.3 71
SGC35683 42-49 R 7p14 GHRHR 6 Ghrhr 26(g) 71
SHGC-12410 48-55 R 7p14 AQP 6 Aqp1 27.0 71
7p14-cen BLVR 2 Blvr 62.0 72?
P,G 7p15 TCRG 13 Tcrg 10.0 b 73
7p22-p15 RAL 13 Rasl1 10.0 b 73
P 7p14-p13 AMPH 13 Amph 10.0 73
SHGC-12763 62-64 P,R 7p15-p13 INHBA 13 Inhba 10.0 a, b 73
7p13 GCPS 13 Xt 8.0 73
D7S2746 62-69 P,R 7p13 GLI3 13 Gli3 8.0 73
P 7p GCK 11 Gk 5.0 c 74
M31145 64-73 P,R 7p13-p12 IGFBP1 11 Igfbp1 2.0 c 74
7p13-p12 IGFBP2 11 Igfbp2 2.0 74
7p12-p12 ADCY1 11 Adcy1 S 74
7p11.1-p13 IKAROS 11 Ikaros 6.0 74
P 7p12.3-12.1 DDC 11 Ddc 7.0 74
stSG3678 74-76 P,G* 7p12 EGFR 11 Egfr 9.0 a, b 74
7q11.23 ELN 5 Eln 72.0 b 75
WI-9137 77-79 P,R 7q22 GUSB 5 Gus 72.0 75
7p12-q21 PHKG1 5 Phkg 72.0 75
P 7q21.3-q22.1 ASL 5 Asl S b 75
P 7q11.23 NCF1 5 Ncf1 76.0 75
7q21.3-q22.1 GNB2 5 Gnb2 76.0 75
7q11.23 LMK1 5 Lmk1 78.0 75
P 7 ZP3 5 Zp3 79.0 b, c 75
7q11.2 POR 6* Por S b 76
7q21-q31 ICA1 6* Ica1 0.1 76
P 7q21-q22 PON1 6* Pon1 0.5 76
7q21-q22 PON3 6* Pon3 0.5 76
7q21-q22 PON2 6* Pon2 1.5 76
A005A20 100-105 P,R,C,G 7q21.3-q22.1 COL1A2 6* Cola2 0.7 76
7q21.3-q22.1 NKNA 6* Tac1 5.0 76
P 7 ASNS 6* AA154701(a) 5.0 a 76
7q21-q22 GNAI1 5* Gnai1 1.0 77
P,C 7q21-q22 PGY1 5* Pgy1 1.0 77
P,G 7q21-q22 PGY3 5* Pgy3 1.0 77
7q21 SRI 5* Sri 1.0 77
P 7q21-q22 CCHL2A 5* Cchl2a 4.0 77
P 7q21.1 HGF 5* Hgf 4.0 a, b 77
SHGC-32029 114-119 P,R 7q22 RELN 5* Rln 8.0 77
P 7p13-p11 OCM 5 Ocm 79.0 78
P,C 7q21.3-q22.1 EPO 5 Epo 80.0 a, b 78
7q21.3-q22 PCOLCE 5 Pcolce 80.0 78
P 7q22.1 AZGP1 5 Azgp1 80.0 78
P 7q22.1 CUTL1 5 Cutl1 80.0 78
7p13-q22 MDH2 5 Mor1 80.0 78
C 7q22 ACHE 5 Ache 80.0 78
7q21.3-q22.1 CYP3A 5 Cyp3a11 82.0 78
C,G 7q21.3-q22 PLANH1 5 D5Kyo2 85.0 78
7q22-q31 NRCAM 12 Nrcam 22.0 79
P 7 PRKAR2A 12 AA177420(a) 21.0 a 79
P 7q22-q31 LAMB1 12 Lamb1-1 21.0 a, b, c 79
P 7q31-q32 DLD 12 Dld 15(g) 79
P,G 7q31 MET 6 Met 6.0 a, b 80
7q KCND2 6 Kcnd2 7.0 80
WI-7597 121-130 R 7q31 WNT2 6 Wnt2 6.2 b 80
SHGC-9783 121-130 P,R,G* 7q31.3 CFTR 6 Cftr 7.5 80
7q32-q35 FLN2 6 Fln2 8.5 80
G 7q32 CPA1 6 Cpa 10.0 b 80
P 7q22-qter PAX4 6 Pax4 9.0 80
P 7q32 LEP 6 Lep 10.5 80
7q33-q34 CALD1 6 Cald1 11.5 b 80
P 7q33-34 PTN 6 Ptn 13.5 b 80
7q32-qter HBNF 6 Hbnf 16.0 c 80
7q34 BRAF 6 Braf2 15.5 b 80
7q34-q35 NEDD2 6 Nedd2 20.5 80
P 7q34-q35 TBXAS1 6 Tbxas1 20.5 80
7q32-qter PRSS1 6 Try1 20.5 b 80
SGC35595 149-157 P,R,G 7q35 TCRB 6 Tcrb 20.5 a, b, c 80
P 7q32-qter CLCN1 6 Clc1 22.5 80
SHGC-11213 163 R 7q35-q36 NOS3 5* Nos3 9.0 c 81
SGC30025 167-175 R 7q36 CDK5 5* Cdk5 12.0 81
7 DPP6 5* Dpp6 12.0 81
7q35-q36 SLC4A2 5* Ae2 14.0 81
7q35-q36 HTR5A 5* Htr5a 15.0 81
P,G 7q36 EN2 5* En2 15.0 b 81
7q36 SHH 5* Shh 16.0 81

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 20 21 22 X

The asterisk character ('*') is used to indicate a different region of homology on the same mouse chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.