Human to Mouse Homology Region Map, Chromosome 6

Human to Mouse Homology Region Map, Chromosome 6

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group

6p25-p24 ME2 7 Mod2 46(g) 58

6p23 D6S231E 13 D13H6S231E 27.0 b 59

6p24.2-p23 EDN1 13 Edn1 26.0 59

6 MAK 13 Mak 23.0 a 59

SHGC-9825 12-14 R 6 BMP6 13 Bmp6 18.0 b 59

SHGC-12039 13 R 6 GCNT1 13 Gcnt1 17.0 59

6p23-p22.3 FIM1 13 Fim1 16.0 b 59

SHGC-10942 36-42 R 6p23-p22.3 PRL 13 Prl 14.0 b 59

WI-11794 42-44 R 6p22.2-p21.1 H1 13 Hist1 12(g) 59

6p22-p21.3 Btn 13 BTN 12(g) 59

6p21.3 MOG 17 Mog 20.3 60

6p21.3 TUBB 17 Tubb 20.0 60

WI-9276 44 R 6p21.3 S 17 S 19.7 60

6p21.3 HSR1 17 MMR1 19.3 60

6p21.3 POU5F1 17 Pou5f1 19.2 60

6p21.3 D6S81E 17 D17H6S81E 19.1 60

SHGC-11076 42-44 R 6p21.3 TNFA 17 Lta 19.1 b 60

46 R 6p21.3-22.1 D6S131 17 D17Leh89 20.5(g) 60

6p21.3 TNFB 17 Tnfb 19.1 60

6p21 ITPR3 17 Itpr3 19.0 60

6p21.3 D6S52E 17 D17H6S52E 19.0 60

6p21.3 D6S51E 17 D17H6S51E 19.0 60

6p21.3 D6S82E 17 D17H6S82E 19.0 60

6p21.3 D6S54E 17 D17H6S54E 19.0 60

6p21.3 G7b 17 G7b 19.0 60

6p21.3 D6S56E 17 D17H6S56E 19.0 60

6p21.3 CREBRP 17 Crebrp 19.0 60

G 6p21.3 HSPA1L 17 Hsc70t 18.9 60

6p21.3 HSPA1A 17 Hsp70-3 18.9 60

stSG6310 44-48 R 6p21.3 HSPA1B 17 Hsp70-1 18.9 60

6p21.3 D6S58E 17 D17H6S58E 18.9 60

6p21.3 NEU 17 Neu1 18.9 60

6p21.3 BAT7 17 Bat7 18.9 60

6p21.3 BAT9 17 Bat9 18.9 60

6p21.3 BAT8 17 Bat8 18.9 60

WI8686 44-48 R 6p21.3 C2 17 C2 18.9 60

SGC32658 44-48 R 6p21.3 BF 17 Bf 18.9 60

6p21.3 RDS 17 Prph2 18.8 60

6p21.3 CYP21P 17 Cyp21a2-ps 18.8 60

SGC31623 44-48 R 6p21.3 C4 17 C4 18.8 a 60

6p21.3 D6S208E 17 D17H6S212E 18.8 60

6p21.3 D6S212E 17 D17H6S208E 18.8 60

6p21.3 D6S214E 17 D17H6S214E 18.8 60

6p21.3 CYP21A1 17 Cyp21a1 18.8 60

6 TNXA 17 Tnx 18.7 60

6p21.3 INT3 17 Int3 18.7 60

P,G 6p21.3 DRA 17 H2-Ea 18.7 60

P 6p21.3 DRB2 17 H2-Eb2 18.7 60

P,G 6p21.3 DRB1 17 H2-Eb1 18.7 a 60

P,G 6p21.3 DQA1 17 H2-Aa 18.7 60

P 6p21.3 DQB1 17 H2-Ab 18.6 60

P 6p21.3 DOB 17 H2-Ob 18.6 60

P 6p21.3 TAP1 17 Tap1 18.6 60

P 6p21.3 LMP7 17 Lmp7 18.6 60

P 6p21.3 TAP2 17 Tap2 18.6 60

P 6p21.3 LMP2 17 Lmp2 18.6 60

P 6p21.3 HLA-DMB 17 H2-Mb1 18.6 60

P 6p21.3 HLA-DMB 17 H2-Mb2 18.6 60

P 6p21.3 HLA-DMA 17 H2-Ma 18.6 60

6p21.3 D6S113E 17 D17H6S113E 18.5 60

P 6p21.3 HLA-DNA 17 H2-Oa 18.5 60

6p21.3 COL11A1 17 Col11a2 18.5 60

P 6p21.3 DPB 17 H2-Pb 18.5 60

6p21.3 RXRB 17 Rxrb 18.5 a 60

6p21.3 KE5 17 H2-Ke5 18.5 60

6p21.3 RING5 17 H2-Ke4 18.5 60

6p21.3 D6S112E 17 D17H6S112E 18.5 60

6p21.3 D6S111E 17 D17H6S111E 18.5 60

6p21.3 RPS18 17 Rps18 18.4 60

6p21 GLP1R 17 Glp1r 18.0 60

6pter-p21 CLPS 17* Clps 17.1 61

G 6p21 PIM 17* Pim1 16.4 b 61

G 6p21.2-p21.1 GLO1 17* Glo1 16.0 61

6p21 HMGIY 17* Hmgi 13.2 61

6p12-p11 MEP1A 17 Mep1a 30.4 b 62

6pter-p21 PGC 17 Upg1 30.0 62

6p21 CBFA1 17 Cbfa1 28.1 62

6p21.2-cen RDS 17 rd2 28.0 62

6p21 ITPR3 17 Itpr3 S 62

6p21 NFYA 17 Nfya 26.0 62

G 6p21.2-p21.1 TCTE1 17 Tcte1 23.5 62

SHGC-9778 72-73 R 6p21-qter TPX1 17 Tpx1 22.8 62

G 6p21.2-p21.1 MUT 17 Mut 22.5 62

6p21.3 CAK 17 Cak 21.5 62

6p21.1-p11 PGK2 17 Pgk2 20.8 62

6p12-p11 BPAG1 1 Dst 16.5 b 63

6q12-q14 COL9A1 1 Col9a1 15.0 a 63

6q12 ME1 9 Mod1 48.0 64

6q12 PGM3 9 Pgm3 48.0 64

WI-9141 73-77 R 6 GST2(?) 9 Gst2-2 44.0 64

6 COL12A1 9 Col12a1 43.0 a, b 64

6 BMP5 9 Bmp5 42.0 b 64

SHGC-11206 91-96 R 6q13 HTR1B 9 Htr1b 40(g) 64

6q16 POU3F2 4 Pou3f2 6.3 65

G 6q12-21 CGA 4 Cga 10.5 b 65

SHGC-11156 91-96 R 6q14-q21 GABRR1 4 Gabrr1 10.5 a 65

WI-7717 93-99 R 6q14-q21 GABRR2 4 Gabrr2 10.5 65

6q14-q15 CNR1 4 Cnr1 13.9(g) 65

6q16.3-q21 GRIK2 10 Grik2 29.0 a 66

6q21-q23.2 GJA1 10 Gja1 29.0 b 66

SHGC12847 118-124 R 6q21-q22 ROS1 10 Ros1 28.0 b 66

6q21 CD24 10 Cd24a 26.0 a 66

6q21 FYN 10 Fyn 25.0 a, b 66

SHGC-11999 142-144 R 6q21-q22.2 MACS 10 Macs 22.0 a 66

6q21-22 COL10A1 10 Col10a1 22.0 a 66

6q22-q23 LAMA2 10 Lama2 20.0 66

6q22-q23 NPPS 10 Npps 19.0 66

SHGC-9751 136-142 R 6q23.3-q24 MYB 10 Myb 16.0 a, b 66

stSG59 138-148 R 6q23-24 IFNGR1 10 Ifngr 15.0 66

SHGC-10701 154 G 6q25.1 ESR 10 Estr 12.0 b 66

SHGC-9720 155-156 R 6q24-q25 OPRM1 10 Oprm 8.0 66

6q22.3-q24 PCMT1 10 Pcmt1 7.0 66

6q24 UTRN 10 Utrn 3.0 66

6q21-q27 TCP10 17* Tcp10a 3.7 67

G 6q26-q27 PLG 17* Plg 7.3 67

6q26-q27 IGF2R 17* Igf2r 7.4 b 67

6q24-q27 MAS 17* Mas1 7.5 b 67

6q26-q27 ACAT 17* Acat1 7.6 67

G 6q26-q27 TCP1 17* Tcp1 7.5 67

G 6q25.2 SOD2 17* Sod2 7.6 67

G 6q27 TCP10 17* Tcp10b 7.7 a 67

G 6q27 TCP10 17* Tcp10c 7.8 67

6q27 THBS2 17* Thbs2 8.1 a 67

6q27 TCTE3 17* Tcte3 8.2 67

6q27 TBP 17* Tbp 8.3 67

RH Map	Genethon Map	Method	In Situ	Human Gene	Mouse Chr.	Mouse Gene	Mouse Locus	Cross	Homology Group
			6p25-p24	ME2	7	Mod2	46(g)		58
			6p23	D6S231E	13	D13H6S231E	27.0	b	59
			6p24.2-p23	EDN1	13	Edn1	26.0		59
			6	MAK	13	Mak	23.0	a	59
SHGC-9825	12-14	R	6	BMP6	13	Bmp6	18.0	b	59
SHGC-12039	13	R	6	GCNT1	13	Gcnt1	17.0		59
			6p23-p22.3	FIM1	13	Fim1	16.0	b	59
SHGC-10942	36-42	R	6p23-p22.3	PRL	13	Prl	14.0	b	59
WI-11794	42-44	R	6p22.2-p21.1	H1	13	Hist1	12(g)		59
			6p22-p21.3	Btn	13	BTN	12(g)		59
			6p21.3	MOG	17	Mog	20.3		60
			6p21.3	TUBB	17	Tubb	20.0		60
WI-9276	44	R	6p21.3	S	17	S	19.7		60
			6p21.3	HSR1	17	MMR1	19.3		60
			6p21.3	POU5F1	17	Pou5f1	19.2		60
			6p21.3	D6S81E	17	D17H6S81E	19.1		60
SHGC-11076	42-44	R	6p21.3	TNFA	17	Lta	19.1	b	60
	46	R	6p21.3-22.1	D6S131	17	D17Leh89	20.5(g)		60
			6p21.3	TNFB	17	Tnfb	19.1		60
			6p21	ITPR3	17	Itpr3	19.0		60
			6p21.3	D6S52E	17	D17H6S52E	19.0		60
			6p21.3	D6S51E	17	D17H6S51E	19.0		60
			6p21.3	D6S82E	17	D17H6S82E	19.0		60
			6p21.3	D6S54E	17	D17H6S54E	19.0		60
			6p21.3	G7b	17	G7b	19.0		60
			6p21.3	D6S56E	17	D17H6S56E	19.0		60
			6p21.3	CREBRP	17	Crebrp	19.0		60
		G	6p21.3	HSPA1L	17	Hsc70t	18.9		60
			6p21.3	HSPA1A	17	Hsp70-3	18.9		60
stSG6310	44-48	R	6p21.3	HSPA1B	17	Hsp70-1	18.9		60
			6p21.3	D6S58E	17	D17H6S58E	18.9		60
			6p21.3	NEU	17	Neu1	18.9		60
			6p21.3	BAT7	17	Bat7	18.9		60
			6p21.3	BAT9	17	Bat9	18.9		60
			6p21.3	BAT8	17	Bat8	18.9		60
WI8686	44-48	R	6p21.3	C2	17	C2	18.9		60
SGC32658	44-48	R	6p21.3	BF	17	Bf	18.9		60
			6p21.3	RDS	17	Prph2	18.8		60
			6p21.3	CYP21P	17	Cyp21a2-ps	18.8		60
SGC31623	44-48	R	6p21.3	C4	17	C4	18.8	a	60
			6p21.3	D6S208E	17	D17H6S212E	18.8		60
			6p21.3	D6S212E	17	D17H6S208E	18.8		60
			6p21.3	D6S214E	17	D17H6S214E	18.8		60
			6p21.3	CYP21A1	17	Cyp21a1	18.8		60
			6	TNXA	17	Tnx	18.7		60
			6p21.3	INT3	17	Int3	18.7		60
		P,G	6p21.3	DRA	17	H2-Ea	18.7		60
		P	6p21.3	DRB2	17	H2-Eb2	18.7		60
		P,G	6p21.3	DRB1	17	H2-Eb1	18.7	a	60
		P,G	6p21.3	DQA1	17	H2-Aa	18.7		60
		P	6p21.3	DQB1	17	H2-Ab	18.6		60
		P	6p21.3	DOB	17	H2-Ob	18.6		60
		P	6p21.3	TAP1	17	Tap1	18.6		60
		P	6p21.3	LMP7	17	Lmp7	18.6		60
		P	6p21.3	TAP2	17	Tap2	18.6		60
		P	6p21.3	LMP2	17	Lmp2	18.6		60
		P	6p21.3	HLA-DMB	17	H2-Mb1	18.6		60
		P	6p21.3	HLA-DMB	17	H2-Mb2	18.6		60
		P	6p21.3	HLA-DMA	17	H2-Ma	18.6		60
			6p21.3	D6S113E	17	D17H6S113E	18.5		60
		P	6p21.3	HLA-DNA	17	H2-Oa	18.5		60
			6p21.3	COL11A1	17	Col11a2	18.5		60
		P	6p21.3	DPB	17	H2-Pb	18.5		60
			6p21.3	RXRB	17	Rxrb	18.5	a	60
			6p21.3	KE5	17	H2-Ke5	18.5		60
			6p21.3	RING5	17	H2-Ke4	18.5		60
			6p21.3	D6S112E	17	D17H6S112E	18.5		60
			6p21.3	D6S111E	17	D17H6S111E	18.5		60
			6p21.3	RPS18	17	Rps18	18.4		60
			6p21	GLP1R	17	Glp1r	18.0		60
			6pter-p21	CLPS	17*	Clps	17.1		61
		G	6p21	PIM	17*	Pim1	16.4	b	61
		G	6p21.2-p21.1	GLO1	17*	Glo1	16.0		61
			6p21	HMGIY	17*	Hmgi	13.2		61
			6p12-p11	MEP1A	17	Mep1a	30.4	b	62
			6pter-p21	PGC	17	Upg1	30.0		62
			6p21	CBFA1	17	Cbfa1	28.1		62
			6p21.2-cen	RDS	17	rd2	28.0		62
			6p21	ITPR3	17	Itpr3	S		62
			6p21	NFYA	17	Nfya	26.0		62
		G	6p21.2-p21.1	TCTE1	17	Tcte1	23.5		62
SHGC-9778	72-73	R	6p21-qter	TPX1	17	Tpx1	22.8		62
		G	6p21.2-p21.1	MUT	17	Mut	22.5		62
			6p21.3	CAK	17	Cak	21.5		62
			6p21.1-p11	PGK2	17	Pgk2	20.8		62
			6p12-p11	BPAG1	1	Dst	16.5	b	63
			6q12-q14	COL9A1	1	Col9a1	15.0	a	63
			6q12	ME1	9	Mod1	48.0		64
			6q12	PGM3	9	Pgm3	48.0		64
WI-9141	73-77	R	6	GST2(?)	9	Gst2-2	44.0		64
			6	COL12A1	9	Col12a1	43.0	a, b	64
			6	BMP5	9	Bmp5	42.0	b	64
SHGC-11206	91-96	R	6q13	HTR1B	9	Htr1b	40(g)		64
			6q16	POU3F2	4	Pou3f2	6.3		65
		G	6q12-21	CGA	4	Cga	10.5	b	65
SHGC-11156	91-96	R	6q14-q21	GABRR1	4	Gabrr1	10.5	a	65
WI-7717	93-99	R	6q14-q21	GABRR2	4	Gabrr2	10.5		65
			6q14-q15	CNR1	4	Cnr1	13.9(g)		65
			6q16.3-q21	GRIK2	10	Grik2	29.0	a	66
			6q21-q23.2	GJA1	10	Gja1	29.0	b	66
SHGC12847	118-124	R	6q21-q22	ROS1	10	Ros1	28.0	b	66
			6q21	CD24	10	Cd24a	26.0	a	66
			6q21	FYN	10	Fyn	25.0	a, b	66
SHGC-11999	142-144	R	6q21-q22.2	MACS	10	Macs	22.0	a	66
			6q21-22	COL10A1	10	Col10a1	22.0	a	66
			6q22-q23	LAMA2	10	Lama2	20.0		66
			6q22-q23	NPPS	10	Npps	19.0		66
SHGC-9751	136-142	R	6q23.3-q24	MYB	10	Myb	16.0	a, b	66
stSG59	138-148	R	6q23-24	IFNGR1	10	Ifngr	15.0		66
SHGC-10701	154	G	6q25.1	ESR	10	Estr	12.0	b	66
SHGC-9720	155-156	R	6q24-q25	OPRM1	10	Oprm	8.0		66
			6q22.3-q24	PCMT1	10	Pcmt1	7.0		66
			6q24	UTRN	10	Utrn	3.0		66
			6q21-q27	TCP10	17*	Tcp10a	3.7		67
		G	6q26-q27	PLG	17*	Plg	7.3		67
			6q26-q27	IGF2R	17*	Igf2r	7.4	b	67
			6q24-q27	MAS	17*	Mas1	7.5	b	67
			6q26-q27	ACAT	17*	Acat1	7.6		67
		G	6q26-q27	TCP1	17*	Tcp1	7.5		67
		G	6q25.2	SOD2	17*	Sod2	7.6		67
		G	6q27	TCP10	17*	Tcp10b	7.7	a	67
		G	6q27	TCP10	17*	Tcp10c	7.8		67
			6q27	THBS2	17*	Thbs2	8.1	a	67
			6q27	TCTE3	17*	Tcte3	8.2		67
			6q27	TBP	17*	Tbp	8.3		67

Human/Mouse Homology Mapping Methods

Method	Description
C	High-resolution cytogenetic methods
G	Genetic linkage mapping
G*	Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L	Long-range restriction site mapping
P	Multiple physical methods, including YAC and cosmid contigs
R	Radiation hybrid mapping
X	Multiple sources of high-resolution data

Gene Notes:

Key	Description
a	Gene Bank Accession Number for Mouse EST
b	Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g	Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y	Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p	Different sources of high resolution mapping data give conflicting positions
r	Difference between position in inbred mice vs. Mus spretus
u	This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have