Human to Mouse Homology Region Map, Chromosome 5

Human to Mouse Homology Region Map, Chromosome 5

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group

5p15 SRD5A1 13 Srd5a1 39.0 44

5p15.3 DAT1 13 Dat1 41.0 44

SHGC-9796 13-18 R 5p15.3-p15.2 ADCY2 13 Adcy2 41.0 44

5p14-p13 GHR 15 Ghr 4.6 a, b 45

5p14-p13 MLVI2 15 Mlvi2 4.6 b 45

SHGC-1118 46-51 R 5p13 IL7R 15 Il7r 4.6 b 45

SHGC-11126 46-51 R 5p14-p13 PRLR 15 Prlr 4.6 45

5p13-p12 LIFR 15 Lifr 4.6 b 45

WI-8877 54-61 R 5p13 C6 15 C6(g) 3(g) 45

5p13 C7 15 C7(g) 3(g) 45

5p13 SLC1A3 15 Slc1a3 5.0 45

WI-6043 54-61 R 5p13.1 PTGER2 15 Ptgerep2 6.4 a 45

5p13 SLC1A3 15 Slc1a3 6.7 45

5p15,1-p14.3 MYO10 15 Myo10 9.2 45

5q11-q14 HTR1A 13* Htr1a 58.0 a, b 46

5q13-qter CCNB1 13* Ccnb1-rs1 56.0 46

5q12-q13 CSPG2 13* Cspg2 55.0 46

G 5q13 HEXB 13* Hexb 52.0 b 46

5 CRHBP 13* Crhbp 51.0 b 46

SHGC-10005 74-79 R,G 5q13 MAP1B 13* Map1b 50.0 b 46

5q12-q13 PIK3R1 13* PIK3R1 50.0 46

5p11-q13 ARSB 13* As1 50.0 46

WI-7171 79-82 R 5q13.3-q14 HMGCR 13* Hmgcr 49.0 46

G 5q11.2-q13.2 DHFR 13* Dhfr 51(g) a, b 46

SGC33609 82-92 R 5 10470(u) 13 AA096661(a) 51(g) a 46

5q13.3 RASA 13* Rasa 47.0 b 46

5q13 F2R 13* Cf2r 47.0 46

5q15-q21 PCSK1 13* Pcsk1 44.0 46

5q14-5q21 PAM 1 Pam 56.7 c 47

SGC30055 116-121 R 5q21-q22 APC 18 Apc 15.0 b 48

15q23 DTS 18 Hegfl 15.0 48

5q22-q32 CD14 18 Cd14 S 48

SHGC-12754 116-121 R 5q21-q22 MCC 18 Mcc 21(g) b 48

5q22-q23 CDO1 18 Cdo1 23(g) 48

5 ITGA1 13 Itga1 65.0 b 49

5q23-q31 ITGA2 13 Itga2 64.0 b 49

5q11-q12 CTLA3 13 Ctla3 64.0 a, b 49

5q21 FER 11 Fert2 46(g) 50

5q23-q31 UBE2B 11 Ube2b 46(g) a 50

5q31-q32 ITK 11* Itk 27.0 51

SHGC-12343 132-137 R 5q23-q31 IL5 11* Il5 28.0 51

G 5q23-q31 IL4 11* Il4 28.0 51

5q23-q31 CSF2 11* Csfgm 29.0 b, c 51

SHGC-12756 132-137 R,G 5q23-q31 IL3 11* Il3 29.0 a, b 51

WI-7178 135-140 R,G 5q23-q31 IRF1 11* Irf1 29.0 51

SHGC-12786 132-140 R 5q31 IL13 11* Il13 29.0 a, b 51

SGC35448 131-134 R 5q31.1 TCF7 11* Tcf7 29.0 a 51

stSG22 141-143 R 5q31 CTNNA1 18 Catna1 11.0 52

5q21-q23 CAMK4 18 Camk4 12.0 52

SHGC11945 141 R 5q31 EGR1 18 Egr1 16.0 52

5q31 MOT2 18 Hsp74 15.0 52

5q23-q31 FBN2 18* Fbn2 29.0 53

R,L 5q31-q32 ADRB2 18* Adrb2 34.0 a, b 53

5q31-q33 CD74 18* Ii 32.0 b 53

R,L 5q31-q34 PDEA6A 18* Pdea 31.0 53

SHGC-11359 147-152 R 5q33-q35 PDGFRB 18* Pdgfrb 30.0 a, b 53

SHGC-11908 147-152 G*R,L 5q33-q35 CSF1R 18* Csfmr 30.0 b 53

R,L 5q31-q33 RPS14 18* Rps14 30.0 53

5q23-q31 LOX 18* Lox 29.0 53

G 5q31-q32 GRL 18* Grl1 20.0 a, b 53

G 5q31-q33 FGF1 18* Fgf1 19.0 a, b, c 53

5q31 CDC25C 18* Cdc25c 17.0 a 53

5q32-q33 GM2A 11 Gm2a 32.0 54

5q31 TCEB1L 11 Tceb1l 31.0 54

5 MGAT1 11 Mgat1 31.0 54

5q33 GRM1 11 Glr1 31.0 54

5q33 GRIA1 11 Gria1 31.0 a 54

5q34-q35 FLT4 11 Flt4 S 54

R,L 5q32-34 ANX6 11 Anx6(g) 29(g) 54

WI-8314 152-156 R,L,G 5q31-q33 SPARC 11 Sparc 30.0 b 54

R,L 5q32 GLRA1 11 Glra1 29.0 a 54

5q31.1-q35 GABRA6 11* Gabra6 23.0 55

5q21.1-q33.1 IL12B 11* Il12b 19.0 55

5q33.2-qter HMMR 11* Hmmr 19.0 55

R,L 5q32-q34 ADRA1 11* Adra1 19.0 a, b 55

R,L 5q31.1-q33.1 GABRG2 11* Gabrg2 19.0 55

WI-7010 161-163 G,R,L 5q34-q35 GABRA1 11* Gabra1 19.0 55

5q34 EBF 11* Ebf(g) 14.8(g) 55

5q31-q33 BHR 13 Bhr 38(g) 56

5q31 TGFB1 13 Tgfb1 38(g) 56

5q23-q31 CAMLG 13* Cam1 35.0 56

5q33-qter FGFR4 13* Fgfr4 34.0 56

G* 5q22-q32(g) IL9(g) 13* Il9 35.0 b 56

SGC35786 161-163 R 5 CTA2 13* Cta2 34.0 56

5 CAML 13* Caml 34.0 56

X58987 179-182 R 5q34-q35 SLC6A3 13* Drd1 34.0 a, b 56

G 5q34-q35 MSX2 13* Msx2 32.0 56

5 PDE4D 13* Pde4d S 56

M94859 182-195 R 5q35 CANX 11 Canx 30(g) 57

RH Map	Genethon Map	Method	In Situ	Human Gene	Mouse Chr.	Mouse Gene	Mouse Locus	Cross	Homology Group
			5p15	SRD5A1	13	Srd5a1	39.0		44
			5p15.3	DAT1	13	Dat1	41.0		44
SHGC-9796	13-18	R	5p15.3-p15.2	ADCY2	13	Adcy2	41.0		44
			5p14-p13	GHR	15	Ghr	4.6	a, b	45
			5p14-p13	MLVI2	15	Mlvi2	4.6	b	45
SHGC-1118	46-51	R	5p13	IL7R	15	Il7r	4.6	b	45
SHGC-11126	46-51	R	5p14-p13	PRLR	15	Prlr	4.6		45
			5p13-p12	LIFR	15	Lifr	4.6	b	45
WI-8877	54-61	R	5p13	C6	15	C6(g)	3(g)		45
			5p13	C7	15	C7(g)	3(g)		45
			5p13	SLC1A3	15	Slc1a3	5.0		45
WI-6043	54-61	R	5p13.1	PTGER2	15	Ptgerep2	6.4	a	45
			5p13	SLC1A3	15	Slc1a3	6.7		45
			5p15,1-p14.3	MYO10	15	Myo10	9.2		45
			5q11-q14	HTR1A	13*	Htr1a	58.0	a, b	46
			5q13-qter	CCNB1	13*	Ccnb1-rs1	56.0		46
			5q12-q13	CSPG2	13*	Cspg2	55.0		46
		G	5q13	HEXB	13*	Hexb	52.0	b	46
			5	CRHBP	13*	Crhbp	51.0	b	46
SHGC-10005	74-79	R,G	5q13	MAP1B	13*	Map1b	50.0	b	46
			5q12-q13	PIK3R1	13*	PIK3R1	50.0		46
			5p11-q13	ARSB	13*	As1	50.0		46
WI-7171	79-82	R	5q13.3-q14	HMGCR	13*	Hmgcr	49.0		46
		G	5q11.2-q13.2	DHFR	13*	Dhfr	51(g)	a, b	46
SGC33609	82-92	R	5	10470(u)	13	AA096661(a)	51(g)	a	46
			5q13.3	RASA	13*	Rasa	47.0	b	46
			5q13	F2R	13*	Cf2r	47.0		46
			5q15-q21	PCSK1	13*	Pcsk1	44.0		46
			5q14-5q21	PAM	1	Pam	56.7	c	47
SGC30055	116-121	R	5q21-q22	APC	18	Apc	15.0	b	48
			15q23	DTS	18	Hegfl	15.0		48
			5q22-q32	CD14	18	Cd14	S		48
SHGC-12754	116-121	R	5q21-q22	MCC	18	Mcc	21(g)	b	48
			5q22-q23	CDO1	18	Cdo1	23(g)		48
			5	ITGA1	13	Itga1	65.0	b	49
			5q23-q31	ITGA2	13	Itga2	64.0	b	49
			5q11-q12	CTLA3	13	Ctla3	64.0	a, b	49
			5q21	FER	11	Fert2	46(g)		50
			5q23-q31	UBE2B	11	Ube2b	46(g)	a	50
			5q31-q32	ITK	11*	Itk	27.0		51
SHGC-12343	132-137	R	5q23-q31	IL5	11*	Il5	28.0		51
		G	5q23-q31	IL4	11*	Il4	28.0		51
			5q23-q31	CSF2	11*	Csfgm	29.0	b, c	51
SHGC-12756	132-137	R,G	5q23-q31	IL3	11*	Il3	29.0	a, b	51
WI-7178	135-140	R,G	5q23-q31	IRF1	11*	Irf1	29.0		51
SHGC-12786	132-140	R	5q31	IL13	11*	Il13	29.0	a, b	51
SGC35448	131-134	R	5q31.1	TCF7	11*	Tcf7	29.0	a	51
stSG22	141-143	R	5q31	CTNNA1	18	Catna1	11.0		52
			5q21-q23	CAMK4	18	Camk4	12.0		52
SHGC11945	141	R	5q31	EGR1	18	Egr1	16.0		52
			5q31	MOT2	18	Hsp74	15.0		52
			5q23-q31	FBN2	18*	Fbn2	29.0		53
		R,L	5q31-q32	ADRB2	18*	Adrb2	34.0	a, b	53
			5q31-q33	CD74	18*	Ii	32.0	b	53
		R,L	5q31-q34	PDEA6A	18*	Pdea	31.0		53
SHGC-11359	147-152	R	5q33-q35	PDGFRB	18*	Pdgfrb	30.0	a, b	53
SHGC-11908	147-152	G*R,L	5q33-q35	CSF1R	18*	Csfmr	30.0	b	53
		R,L	5q31-q33	RPS14	18*	Rps14	30.0		53
			5q23-q31	LOX	18*	Lox	29.0		53
		G	5q31-q32	GRL	18*	Grl1	20.0	a, b	53
		G	5q31-q33	FGF1	18*	Fgf1	19.0	a, b, c	53
			5q31	CDC25C	18*	Cdc25c	17.0	a	53
			5q32-q33	GM2A	11	Gm2a	32.0		54
			5q31	TCEB1L	11	Tceb1l	31.0		54
			5	MGAT1	11	Mgat1	31.0		54
			5q33	GRM1	11	Glr1	31.0		54
			5q33	GRIA1	11	Gria1	31.0	a	54
			5q34-q35	FLT4	11	Flt4	S		54
		R,L	5q32-34	ANX6	11	Anx6(g)	29(g)		54
WI-8314	152-156	R,L,G	5q31-q33	SPARC	11	Sparc	30.0	b	54
		R,L	5q32	GLRA1	11	Glra1	29.0	a	54
			5q31.1-q35	GABRA6	11*	Gabra6	23.0		55
			5q21.1-q33.1	IL12B	11*	Il12b	19.0		55
			5q33.2-qter	HMMR	11*	Hmmr	19.0		55
		R,L	5q32-q34	ADRA1	11*	Adra1	19.0	a, b	55
		R,L	5q31.1-q33.1	GABRG2	11*	Gabrg2	19.0		55
WI-7010	161-163	G,R,L	5q34-q35	GABRA1	11*	Gabra1	19.0		55
			5q34	EBF	11*	Ebf(g)	14.8(g)		55
			5q31-q33	BHR	13	Bhr	38(g)		56
			5q31	TGFB1	13	Tgfb1	38(g)		56
			5q23-q31	CAMLG	13*	Cam1	35.0		56
			5q33-qter	FGFR4	13*	Fgfr4	34.0		56
		G*	5q22-q32(g)	IL9(g)	13*	Il9	35.0	b	56
SGC35786	161-163	R	5	CTA2	13*	Cta2	34.0		56
			5	CAML	13*	Caml	34.0		56
X58987	179-182	R	5q34-q35	SLC6A3	13*	Drd1	34.0	a, b	56
		G	5q34-q35	MSX2	13*	Msx2	32.0		56
			5	PDE4D	13*	Pde4d	S		56
M94859	182-195	R	5q35	CANX	11	Canx	30(g)		57

Human/Mouse Homology Mapping Methods

Method	Description
C	High-resolution cytogenetic methods
G	Genetic linkage mapping
G*	Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L	Long-range restriction site mapping
P	Multiple physical methods, including YAC and cosmid contigs
R	Radiation hybrid mapping
X	Multiple sources of high-resolution data

Gene Notes:

Key	Description
a	Gene Bank Accession Number for Mouse EST
b	Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g	Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y	Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p	Different sources of high resolution mapping data give conflicting positions
r	Difference between position in inbred mice vs. Mus spretus
u	This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have