NCBI GenBank

Human to Mouse Homology Region Map, Chromosome 4

How to use this Resource

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group
4p16.3 PDE6B 5 Pdeb 57.0 a 37
4p16.3 DAGK4 5 Dagk4 57.0 37
4p16.3 IDUA 5 Idua 57.0 37
4p16.3 LRPAP1 5* Lrpap1 18.0 38
4p16.3 GPRK2L 5* Gprk2l 20.0 38
4p16.3 D4S43 5* D5H4S43 20.0 b 38
X84939 0 R 4p16.3 FGFR3 5* Fgfr3 20.0 b 38
SHGC-13378 6-12 R,G 4p16.3-p15 ADRA2C 5* Adra2c 20.0 38
4p16.3 ADD1 5* Add1 20.0 38
4p16.3 HD 5* Hdh 21.0 38
G 4p16.3-p16.1 MSX1 5* Msx1 21.0 b 38
4p16.3 D4S115 5* D5H4S115 22.0 38
4p16.2-p16.1 D4S62 5* D5H4S62 23.0 38
R 4p15.3-p15.1 DRD5 5* Drd5 23.0 b 38
SGC31590 24-32 R 4 CD38 5* Cd38 28.0 38
4p15.3 QDPR 5* Qdpr 30.0 a 38
4p16.2-p15.1 D4S76 5* D5H4S76 33.0 38
4p16.2-p15.1 D4S80 5* D5H4S80 33.0 38
SHGC12838 38-43 R 4 CCKAR 5* Cckar 34.0 c 38
4p14-q12 PGM2 5* Pgm1 38.0 38
4p11-q12 PEPS 5* Pep7 39.0 38
4p13-p14 RFC1 5* Recc1 39.0 38
D25250 50-56 R 4 22148(u) 5* W65100(a) 40.0 a 38
WI-7294 61-62 R 4p12-p13 GABRA2 5* Gabra2 40.0 38
G 4p12-p13 GABRB1 5* Gabrb1 40.0 38
4p12 TXK 5* Txk 40.0 38
R 4p13-p14 CNCG 5* Cncg 41.0 a, b 38
SHGC-9639 60-62 R 4p12 TEC 5* Tec 41.0 b 38
4q12-q13.3 CENPC 5* Cenpc 41.0 38
4q12 KDR 5* Flk1 42.0 b, c 38
R,G 4q12 KIT 5* Kit 42.0 a, b, c 38
G* 4q11-q12 PDGFRA 5* Pdgfra 42.0 a, b, c 38
4q13 UGT2B 5* Ugt2b5 S 38
L03380 71-77 R 4q13.1-q21.1 GNRHR 5* Gnrhr 44.0 c 38
4q13.1-q21.1 STE 5* Ste 44.0 38
R 4p16.3-q21 CSN2 5* Csnb 45.0 a 38
4q AMBN 5* Ambn 46.0 38
4q AMEN 5* Amen 49.0 38
SHGC-10695 77-81 R 4q11-q13 AFP 5* Afp 50.0 a 38
A004G47 77-90 R,G 4q11-q13 ALB 5* Alb1 50.0 b, c 38
R,G 4q12-q13 GC 5* Gc 50.0 38
D4S3138 77-81 R 4q13-q21 AREG 5* Areg 51.0 38
4q13-q21 BTC 5* Btc 51.0 38
WI-18564 77-90 R 4q21 IGJ 5* Igj S 38
G* 4q21 GRO1 5* Mgsa 51.0 a 38
4p14-q21 BMP3 5* Bmp3(g) 55.0 b 38
M23534 77-90 R 4q21 FGF5 5* Fgf5(g) 55.0 b 38
4q21 DMP1 5* Dmp1 56.0 38
4q21-25 IBPS 5* Ibps 56.0 38
R,G 4q11-q21 SPP1 5* Spp1(g) 56.0 38
4q21-q23 ADH1 3 Adh1 71.2 39
WI-14387 99-105 R,G 4q21-q23 ADH3 3 Adh3 71.2 39
4q21-q25 ADH5 3 Adh5 S 39
4q23-q25 LEF1 3 Lef1 61.6 39
WI-7764 106-113 R 4q25 NFKB1 3 Nfkb1 68.9 39
SHGC-10709 115-119 G,R 4q25 EGF 3 Egf 65.2 a, b 39
SHGC-11962 115-119 R 4q25-q27 ANK2 3 Ank2 62.5 39
SGC35615 120-123 G,R 4q28-q31 FABP2 3 Fabpi 55(g) 39
A006S14 123-125 R,G 4q25-q31 CCNA 3* Ccna 19.2 a, b 40
WI-7035 125-127 R,G* 4q26-q27 IL-2 3* Il2 19.2 a, b 40
WI-6076 143-153 R 4q25-q27 FGF2 3* Fgf2 19.9 a, b 40
4q26-q28 ANX5 3* Anx5 20.0 40
WI-93555 139-143 R 4q31 IL15 8 Il15 37.0 41
G 4q28-q31 UCP 8 Ucp 37.0 a, b 41
SHGC-12331 143-145 R,G 4q28-q31 GYPA 8 Gypa 36.0 41
stSG1439 143-153 R,G* 4q28 FGG 3 Fgg 41.3 b 42
U33267 157-170 R 4q32 GLRB 3 Glrb 39.1 a 42
4q32-q33 GRIA2 3 Gria2 33.6(g) 42
4q31.3-q32 MLR 8* Mlr 35(g) 43
A007J08 169-170 R 4 11736(u) 8* W10357(a) 32(g) a 43
SHGC-12458 160-170 R 4q31.3-q32 NYPY1R 8* Npy1r 33.0 43
4q32-q33 TLL 8* Tll 32.5 43
H68066 169-178 R 4q32 CLC3 8* Clc3 32.5 43
4q28 CPE 8* Cpe 32.0 43
4q35 ANT1 8* Ant1 25.0 43
WI-9131 199-211 R 4q35 FXI 8* Cf11 25.0 43
SHGC-9749 199-211 R 4q35 KLK3 8* Klk3 22.5 43
4q35 MTNR1A 8* Mntria S 43
4q34-q35 AGA 8* Aga S 43

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 20 21 22 X

The asterisk character ('*') is used to indicate a different region of homology on the same mouse chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.