NCBI GenBank

Human to Mouse Homology Region Map, Chromosome 2

How to use this Resource

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group
G 2p25-p24 TPO 12 Tpo 15.0 9
WI-15103 0-3 R 2 32438(u) 12 AA163387(a) 9 a 9
G 2p25 ACP1 12 Acp1 S 9
2p25 ID2 12 Idb2 7.0 9
NIB787 12-17 R 2p24-p25 RRM2 12 Rrm2 7.0 9
stSG1950 22-32 R 2p25 ODC1 12 Odc 6.0 b 9
2p23 POMC 12 Pomc1 4.0 a, b 9
WI-7056 36-40 R 2p24.1 MYCN 12 Nmyc1 4.0 9
stSG4510 48-50 R 2 KIF3C(?) 12 Kif3c 4.0 9
2p24-p2 ADCY3 12 Adcy3 S 9
SGC34591 40-48 R,G 2p24-p23 APOB 12 Apob 2.0 9
stSG9345 40-48 R 2p SDC 12 Synd1 1.0 b 9
2p12(g) REG1A(g) 12 Reg1a S 9
2p22-p21 PRKR 17 Prkr 40.0 10
2p22-p21 Sos1 17 Sos1 44.0 10
stSG2372 51-54 R 2 13505(u) 17 W61859(a) 45.3 a 10
SHGC-12567 54-58 R 2p23-p22 XDH 17 Xdh 45.3 a 10
SHGC-10660 74-77 R 2p22-p21 MSH2 17 Msh2 45.9 10
WI-7751 73-77 R 2p21 LHCGR 17 Lhcgr 46.5 b 10
2p23 ALK 17 Alk 50.0 10
WI-7257 73-77 R 2 PIGF 17 Pigf 54.3 10
2p23-p12 MEIS1 11 Meis1 11.0 11
SHGC-31543 84-88 R 2p16 MDH1 11 Mor2 11.0 11
2p13 OTX1 11 Otx1 13.0 11
2p21 SPTBN1 11 Spnb2 13.0 11
SGC35444 84-85 R 2p13-p12 REL 11 Rel 13.0 b 11
WI-13176 89-91 R 2 RAB1 11 Rab1 11.0 11
SHGC-13626 91-92 R 2p13 ANX4 6 Anx4 38.0 12
SHGC-12714 92 R,G 2p13 TGFA 6 Tgfa 38.0 b 12
SHGC-9689 91-95 R 2p13-p12 MAD 6 Mad 38.0 a 12
2p13 EGR4 6 Egr4 36.5 12
2 ADD2 6 Add2 35.5 12
WI-5987 92-95 R 2p13 ACTG2 6 Actg2 35.0 12
2p13 AUP1 6 Aup1 35.0 12
WI-7682 107-111 R 2p12-2p11.1 CTNNA2 6 Catna2 34.5 12
WI-8376 107-111 R 2p SFTP3 6 Sftp3 31.0 b 12
WI-9098 115-118 R,G 2p12 CD8A 6 Cd8a 30.5 a 12
SHGC-10730 111-115 R 2p12 CD8B1 6 Cd8b 30.5 12
2p11 FABP1 6 Fabpl 30.0 12
2p12 IGK 6 Igk 30.0 a, b 12
2q11-q13 IGKDEL 6 Igkrs 30.0 12
SGC35324 115-120 R 2q12 IL1R1 1 Il1r1 19.5 b 13
WI-11083 115-118 R 2 IL1R2 1 Il1r2 19.5 13
2 SLC9A2 1 Slc9a2 20.4 13
2 SLC9A4 1 Slc9a4 20.4 13
SHGC-10948 115-118 R 2 ST2 1 St2 20.6 13
G 2p13-2q13 ADRA2B 2 Adra2b 73.0 b 14
SHGC-12507 127 R 2q11-q14 GLVR1 2 Glvr1 73.0 b 14
SHGC-10703 127 R,G 2q13 IL1A 2 Il1a 73.0 a, b 14
stSG142 127-134 R 2q13-q21 IL1B 2 Il1b 73.0 c 14
2q12-q14 PAX8 2* Pax8 10.5 a, c 15
stSG1594 129-134 R 2q12-q13 IL1RN 2* Il1rn 10.0 a 15
stSG19 129-134 R 2cen-q13 INHBB 1* Inhbb 64.1 b 16
2q13-q21 EN1 1* En1 64.1 a, b 16
2q11-13 HTR5B 1* Htr5b 63.0 c 16
2q14-q21 VIS1 2 His1 29.2 b 17
2q23 SCN2A 2 Scn2a 36.0 17
2p23-qter DPP4 2 Dpp4 35.0 17
2q23-q24.3 SCN3A 2 Scn3a 36.0 17
2q23 SCN1A 2 Scn1a 36.0 17
2q24-q31 SCN1B 2 Scn2a 36.0 17
SHGC-11004 170-180 R,G* 2q23 GCG 2 Gcg 36.0 a, b 17
SHGC12676 170-180 R 2 ITGA6 2 Itga6 38.0 b 17
SHGC-10731 170-180 R 2 SSB 2 Ssb 41.0 17
SGC31511 175-180 R 2q31 GAD1 2 Gad1 43.0 17
2q24-q32 CHRNA1 2 Acra 44.0 b, c 17
Bda09g02 182-189 R 2q31-q32 TTN 2 Ttn 44.0 17
2q32 DLX1 2 Dlx1 44.0 17
2q32 DLX2 2 Dlx2 44.0 17
2q24.3-q31 EVX2 2 Evx2 45.0 17
2q31 HOXD1 2 Hoxd1 45.0 b 17
2q31-q37 HOXD3 2 Hoxd3 45.0 17
2q31-q37 HOXD4 2 Hoxd4 45.0 17
2q31-q37 HOXD8 2 Hoxd8 45.0 17
X59372 182-189 R 2q31-q37 HOXD9 2 Hoxd9 45.0 17
2q31-q37 HOXD10 2 Hoxd10 45.0 17
2q31-q37 HOXD11 2 Hoxd11 45.0 17
2q31-q37 HOXD12 2 Hoxd12 45.0 17
2q31-q37 HOXD13 2 Hoxd13 45.0 17
stSG2611 192-194 R 2 21862(u) 2 AA119941(a) 45.0 a 17
2q31-q32 ITGAV 2 Itgav(g) 46.0 17
X16983 189-194 R 2q31-32 ITGA4 2 Itga4(g) 46.0 b 17
M19668 189-192 R 2q31-q32 NEB 2* Neb 30(g) a, b 18
WI-7548 194-196 R 2q31-q32.3 COL3A1 1 Col3a1 21.1 a 19
2q32-q34 GLS 1 Gls 22.9 a, b 19
WI-9155 196-201 R 2 INPP1 1 Inpp1 27.1 19
R91570 196 R 2 STAT4 1 Stat4 28.0 19
WI-9291 200-206 R 2 AOX1 1 Aox1 23.2g 19
2q32-qter IDH1 1* Idh1 29.8 20
2q33 CTLA4 1* Ctla4 30.1 a, c 20
WI-7843 200-206 R 2q33 CD28 1* Cd28 30.1 a 20
WI-8988 210-215 R 2q32-q34 CREB1 1* Creb1 31.0 b 20
G 2q33-q35 CRYG1 1* Cryga 32.0 a, b 20
2q33-q35 CRYGD 1* Crygd 32.0 20
WI-14008 210-215 R 2q34-q35 MAP2 1* Mtap2 33.7 b 20
WI7607 210-215 R 2q33-q34 MYL1 1* Mylf 34.1 a 20
WI-8999 217-222 R 2q34 FN1 1* Fn1 36.1 a, b 20
SGC31996 217-222 R 2q33-q36 IGFBP5 1* Igfbp5 36.1 20
WI-7087 217-222 R 2q34 TNP1 1* Tnp1 38.4 a, b 20
2q35 NRAMP 1* Nramp 39.2 20
SHGC-12787 209-220 R 2q35 IL8RB 1* Il8rb 40.0 20
2q33-q34 IGFBP2 1* Igfbp2 40.7 20
SHGC-12381 209-220 R 2q35 VIL1 1* Vil 40.8 a, b 20
2q35 DES 1* Des 41.1 20
2q33-q34 INHA 1* Inha 41.6 a, b 20
WI-7962 228-230 R 2q36 PAX3 1* Pax3 44.0 20
2q12-qter NCL 1* Ncl 48.4 20
WI-8984 242-248 R 2q37.1 ALPI 1* Akp3 51.7 a 20
2q37 UGT1A1 1* Ugt1a1 51.7 20
2q32-qter CHRNG 1* Acrg 52.3 a, b 20
2q36-q37 CHRND 1* Acrd 52.3 20
2q37.1 SAG 1* Sag 53.6 a 20
2q37.3 COL6A3 1* Col6a3 53.9 b 20
2q37 WS1 1* Sp 54.4 20
stSG314 258-272 R 2q37 HDLBP 1* Hdlbp 55.3 20
2q33-qter CYP27 1* Cyp27 S 20
Cda11f08 >272 R 2 10196(u) 1* W49948(a) 59.0 a 20

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 20 21 22 X

The asterisk character ('*') is used to indicate a different region of homology on the same mouse chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.