NCBI GenBank

Human to Mouse Homology Region Map, Chromosome 12

How to use this Resource

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group
X 12p13 KCNA5 6 Kcna5 59.0 b 120
12p13 KCNA1 6 Kcna1 59.0 b, c 120
WI-6010 13-21 R,X,G 12p13.3 VWF 6 Vwf 59.0 b 120
12 SCNN1 6 Scnn1a 58.0 120
X 12p13 TNFR1 6 Tnfr1 57.0 b 120
12p13 NOL1 6 Nol1 57.0 120
WI-7129 13-21 R 12p13 CD27 6 Cd27 57.0 b 120
X 12p13 PTPN6 6 Hcph 589(g) a, b, c 120
A007D38 15-24 R,X,G 12p12 CD4 6 Cd4 57.0 a, b 120
SHGC-11141 15-21 R 12p13 CD9 6 Cd9 57.0 a 120
12p MGP 6 Mglap S 120
X 12p13 TPI1 6 Tpi 56.0 b 120
12p13.3-p11.1 SYB1 6 Syb1 56.0 120
12p13 GAPD 6 Gapd 56.0 120
12p13.3 SLC2A3 6 Glut3 55.0 b 120
12p13.3 RAD52 6 Rad52 55.0 120
stSG317 16-22 R 12 M6PR 6 M6pr 54.5 b 120
12p13 NTF3 6* Ntf3 60.0 b 121
12p13 CCND2 6* Ccnd2 60.0 b 121
12p13.3 FGF6 6* Fgf6 60.0 b 121
12p13.3 RAD52 6* Rad52 60.0 121
X,G 12p12.3-p13.3 A2M 6* A2m S 121
WI-9214 13-21 R,X 12p13-p12 CD69 6* Cd69 60.0 b 121
12p12.1-11.2 SIAT8 6* Siat8a 60.0 121
SGC35306 31-36 R 12p12.3-p12.1 IAPP 6* Iapp 62.0 121
SHGC-12682 37-48 R 12p12.2-p12.1 LDHB 6* Ldh2 62.0 121
12p13.2 PRH1 6* Prp 63.0 121
12p12 GRIN2B 6* Grin2b 64.5 121
12p12 GUC2c 6* Guc2c 67.0 121
12p13 LMO3 6* Lmo3 70.0 121
RECQL RECQL 6* Recgl 70.0 121
WI-9193 37-53 R 12p12.1-p11.2 PTHLH 6* Pthlh 73.0 a 121
X 12p13 RBTNL2 6* Rbtn3 73.0 b 121
12p13.3 D12S274E 6* D6Ucla1e 74.5 121
12p11.2 KRAG 6* Krag 74.0 121
X,G* 12p12.1 KRAS2 6* Kras2 74.0 a, b, c 121
12q13 AQP5 15 Aqp5 56.8 122
12q13 CACLNB3 15 Cchb3 56.8 122
WI-6991 65-67 R,X,G 12q12-q13.1 COL2AI 15 Col2a1 56.8 a, c 122
G 12 ELA1 15 Ela1 56.8 b 122
R 12q13 WNT1 15 Wnt1 56.8 b 122
12 D15KZ1M 15 D15Kz1 56.8 122
X 12 GPD1 15 Gdc1 56.8 a, b 122
12q12-q13 TEGT 15 Tegt 56.8 122
X67683 67-70 R.X 12p12.2-q11 KRT4 15 Krt2-4 58.7(g) 122
12p13.2-q24.1 KRT8 15 Krt2-8 58.7(g) 122
X 12q13 RARG 15 Rarg 57.4(g) a, b 122
12 TCFCP2 15 Tcfc[2 56.8 122
WI-7746 65-67 R 12q13 ITGB7 15 Itgb7 61.1(g) 122
WI-11374 65-67 R 12q13 NRAMP2 15 Nramp2 59.8(g) 122
SHGC-10996 70-72 R,X 12q13 SP1 15 Spl1 58.7(g) 122
12q12-q13 HOXC13 15 Hoxc13 57.4 122
12q11-q13 ITGA5 15 Itga5 57.4 b, c 122
X 12q12-q13 HOXC4 15 Hoxc4 57.4 b 122
12q12-q13 HOXC5 15 Hoxc5 57.4 122
12q12-q13 HOXC6 15 Hoxc6 57.4 122
12q12-q13 HOXC8 15 Hoxc8 57.4 122
12q12-q13 HOXC9 15 Hoxc9 57.4 122
12q12-q13 HOXC10 15 Hoxc10 57.4 122
12q12-q13 HOXC11 15 Hoxc11 57.4 122
12q12-q13 HOXC12 15 Hoxc12 57.4 122
12q11-q12 CNTN1 15 Cntn1 57.6 122
12q13 HMR 15 Hbr1 S 122
12q12-q13 PRPH 15 Prph S 122
12 PFKX 15 Pfk4 S 122
12q13-q14 LRP1 15 Lrp S 122
R 12q13-q14 A2MR 15 A2mr S 122
12q13 NFE2 15 Nfe2 61.7 122
12q13 SCN8A 15 Scn8a 64.0 122
12p11-qter CS 10 Cs S 123
12pter-q21 D12S53E 10 D10H12S53E 74.0 b 123
SGC35265 70-76 R 12q13 ERBB3 10 Erbb3 70.0 b 123
WI-7573 70-76 R,X 12q13 GLI 10 Gli 69.0 b 123
12q14 MIP 10 Mip 74.0 123
12q14-12q15 HGMIC 10 Hgmic 67.5 a 123
X 12q24.1 IFNG(p) 10 Ifng 67.0 a, b 123
12 MDM1 10 Mdm1 67.0 123
12 LYZ 10 Lyzs 66.0 b 123
SHGC-12688 87-92 R 12 MYF5 10* Myf5 59.0 124
SGC35587 86-92 R 12 MYF6 10* Myf6 59.0 b 124
12q31.2-q22 LUM 10* Ldc 58.0 124
A002S37 87-97 R 12 SYT1 10* Syt1 58.0 124
12q22 MGF 10* Mgf 57.0 b 124
X 12q21.3-q23 DCN 10* Dcn 55.0 124
12q21 PEPB 10* Pep2 53.0 124
SHGC-9625 99-103 R,X 12q22-24.1 HAL 10* Hal 51.0 124
12q23 ELK3 10* Elk3 51.0 a 124
WI-9021 106-113 R,X,G 12q22-q23 IGF1 10* Igf1 48.0 b 124
SHGC-12465 118-126 R,X 12q22-q24.2 PAH 10* Pah 47.0 a, b 124
12q23-q24 PMCH 10* Pmch 47.0 124
X 12q24.2-qter TRA1 10* Tra1 49(g) 124
X 12q22-q23 NFYB 10* Nfyb 43.7(g) 124
12q22-qter ACADS 5 Acads 65.0 125
12q24.3 TCF1 5 Tcf1 65.0 125
12q24.3 DAO 5 Dao1 65.0 125
12 CENPC 5 Cenpc S 125
SGC31491 126-133 R 12q24.2-q24.3 NOS1 5 Nos1 70.0 125

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 20 21 22 X

The asterisk character ('*') is used to indicate a different region of homology on the same mouse chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.