Human to Mouse Homology Region Map, Chromosome 10

Human to Mouse Homology Region Map, Chromosome 10

RH Map Genethon Map Method In Situ Human Gene Mouse Chr. Mouse Gene Mouse Locus Cross Homology Group

10p KIN17 2 Kin17 S 100

10p15-p14 ITIH2 2 Intin2 1.0 100

H12715 17-22 R 10p15 GATA3 2 Gata3 4.0 b 100

10p13 MRC1 2 Mrc1 5.0 100

10p15-p14 IL15RA 2 Il15ra 6.4 100

G 10p15-p14 IL2RA 2 Il2ra 6.4 100

G 10p13 VIM 2 Vim 7.0 b 100

SHGC-11041 43-46 R 10p13 BMI1 2 Bmi1 9.0 b 100

SGC31510 50-53 R 10p12-p11.2 GAD2 2 Gad2 9.0 100

10p11.2 TCF8 18 Tcf8 0.0 101

10p12.1-p11.1 CREM 18 Crem S 101

10p11 TPL2 18 Tpl2 0.0 b 101

X53044 68-72 R,G 10q11.2 RET 6 Ret 53.2 a, b 102

R52945 68-72 R 10q11.2 ALOX5 6 Alox5 53.2 b 102

SHGC-10740 72-74 R 10q11.2 MBL 14 Mbl1 15.0 103

10q11.2 CHAT 14 Chat 15.5 c 103

10q11-q24 ADK 14 Adk 10(g) 103

10q11.2-qter VCL 14* Vcl 2.5 b 104

G* 10q24 PLAU 14* Plau 2.5 a, b, c 104

10q22 CAMK 14* Camkg S 104

SHGC-12519 93-98 R 10q21.1-q21.2 ANX7 14* Anx7 1.5 104

SHGC-9763 105-109 R 10q23-q24 GLUD 14 Glud 15.5 105

10q22.2-q23.1 SFTP4 14 Sftp4 14.0 105

WI-7219 105-109 R 10q21-q24 SFTP1 14 Sftp1 14.0 b 105

G 10q11.2 RBP3 14 Rbp3 13.0 b 105

10q21 ANK3 10 Ank3 38.5 106

10q11.1-q24 PP 10 Pyp S 106

10q21.1 CDC2 10 Cdc2a 38.0 a, b 106

10q22 PRF1 10 Pfp 36.0 106

10 DCOH 10 Dcoh S 106

G 10q21.1 EGR2 10 Egr2 35.0 c 106

10q21-q22 PSAP 10 Psap 35.0 106

10q22 HK1 10 Hk1 30.0 b 106

D29201 111-123 R 10q24.1 APT1 19 Fas 23.0 a, b 107

D10S2141 114-122 R 10q23-q25 IDE 19 Ide 25.0 a 107

10q23-q24 IFI54 19 Ifi54 S 107

T90506 111-123 R 10q23-q24 IFI56 19 Ifi56 S 107

10q23.2-q23.3 LIPA 19 Lip1 S 107

10q24.1-q24.3 CYP2C 19 Cyp2c 27.0 a, b 107

10q24-q26 PNLIP 19 Pnlip 29.0 107

10q24.1-q25.1 GOT1 19 Got1 37.0 107

SHGC-10696 131-134 R 10q23-q24 RBP4 19 Rbp4 38.0 107

10q23-24 DNTT 19 Tdt 39.5 b 107

M62626 131 10q24 HOX11 19 Tlx1 43.0 c 107

10q24 PAX2 19 Pax2 43.0 107

10q25-q26 FGF8 19 Fgf8 45.0 107

10q24-q25 CYP17 19 Cyp17 46.0 107

10q24.3 BPAG2 19 Col17a1 49.0 107

10q25 MXI1 19 Mxi1 49.5 a 107

10q24-q26 ADRA2A 19 Adra2a 50.0 a 107

10 AOP1 19 Aop1 50.0 107

10q24-q26 ADRB1 19 Adrb1 51.0 a 107

10q25.3 PGAM1 19 Pgam1 S 107

M23204 151-162 R.G 10q26 OAT 7 Oat 63.0 108

SHGC-9871 145-162 R 10q25.3-q26 FGFR2 7 Fgfr2 63.0 b 108

stSG1303 169-182 R,G 10q24.3-qter CYP2E1 7 Cyp2e1 64.0 108

10q26 MGMT 7 Mgmt 66.0 b 108

Cda02c01 158-162 R 10q25.2-q26.3 UROS 7 Uros3 63(g) 108

10q26 PTPRE 7 Ptpre 68.0 108

RH Map	Genethon Map	Method	In Situ	Human Gene	Mouse Chr.	Mouse Gene	Mouse Locus	Cross	Homology Group
			10p	KIN17	2	Kin17	S		100
			10p15-p14	ITIH2	2	Intin2	1.0		100
H12715	17-22	R	10p15	GATA3	2	Gata3	4.0	b	100
			10p13	MRC1	2	Mrc1	5.0		100
			10p15-p14	IL15RA	2	Il15ra	6.4		100
		G	10p15-p14	IL2RA	2	Il2ra	6.4		100
		G	10p13	VIM	2	Vim	7.0	b	100
SHGC-11041	43-46	R	10p13	BMI1	2	Bmi1	9.0	b	100
SGC31510	50-53	R	10p12-p11.2	GAD2	2	Gad2	9.0		100
			10p11.2	TCF8	18	Tcf8	0.0		101
			10p12.1-p11.1	CREM	18	Crem	S		101
			10p11	TPL2	18	Tpl2	0.0	b	101
X53044	68-72	R,G	10q11.2	RET	6	Ret	53.2	a, b	102
R52945	68-72	R	10q11.2	ALOX5	6	Alox5	53.2	b	102
SHGC-10740	72-74	R	10q11.2	MBL	14	Mbl1	15.0		103
			10q11.2	CHAT	14	Chat	15.5	c	103
			10q11-q24	ADK	14	Adk	10(g)		103
			10q11.2-qter	VCL	14*	Vcl	2.5	b	104
		G*	10q24	PLAU	14*	Plau	2.5	a, b, c	104
			10q22	CAMK	14*	Camkg	S		104
SHGC-12519	93-98	R	10q21.1-q21.2	ANX7	14*	Anx7	1.5		104
SHGC-9763	105-109	R	10q23-q24	GLUD	14	Glud	15.5		105
			10q22.2-q23.1	SFTP4	14	Sftp4	14.0		105
WI-7219	105-109	R	10q21-q24	SFTP1	14	Sftp1	14.0	b	105
		G	10q11.2	RBP3	14	Rbp3	13.0	b	105
			10q21	ANK3	10	Ank3	38.5		106
			10q11.1-q24	PP	10	Pyp	S		106
			10q21.1	CDC2	10	Cdc2a	38.0	a, b	106
			10q22	PRF1	10	Pfp	36.0		106
			10	DCOH	10	Dcoh	S		106
		G	10q21.1	EGR2	10	Egr2	35.0	c	106
			10q21-q22	PSAP	10	Psap	35.0		106
			10q22	HK1	10	Hk1	30.0	b	106
D29201	111-123	R	10q24.1	APT1	19	Fas	23.0	a, b	107
D10S2141	114-122	R	10q23-q25	IDE	19	Ide	25.0	a	107
			10q23-q24	IFI54	19	Ifi54	S		107
T90506	111-123	R	10q23-q24	IFI56	19	Ifi56	S		107
			10q23.2-q23.3	LIPA	19	Lip1	S		107
			10q24.1-q24.3	CYP2C	19	Cyp2c	27.0	a, b	107
			10q24-q26	PNLIP	19	Pnlip	29.0		107
			10q24.1-q25.1	GOT1	19	Got1	37.0		107
SHGC-10696	131-134	R	10q23-q24	RBP4	19	Rbp4	38.0		107
			10q23-24	DNTT	19	Tdt	39.5	b	107
M62626	131		10q24	HOX11	19	Tlx1	43.0	c	107
			10q24	PAX2	19	Pax2	43.0		107
			10q25-q26	FGF8	19	Fgf8	45.0		107
			10q24-q25	CYP17	19	Cyp17	46.0		107
			10q24.3	BPAG2	19	Col17a1	49.0		107
			10q25	MXI1	19	Mxi1	49.5	a	107
			10q24-q26	ADRA2A	19	Adra2a	50.0	a	107
			10	AOP1	19	Aop1	50.0		107
			10q24-q26	ADRB1	19	Adrb1	51.0	a	107
			10q25.3	PGAM1	19	Pgam1	S		107
M23204	151-162	R.G	10q26	OAT	7	Oat	63.0		108
SHGC-9871	145-162	R	10q25.3-q26	FGFR2	7	Fgfr2	63.0	b	108
stSG1303	169-182	R,G	10q24.3-qter	CYP2E1	7	Cyp2e1	64.0		108
			10q26	MGMT	7	Mgmt	66.0	b	108
Cda02c01	158-162	R	10q25.2-q26.3	UROS	7	Uros3	63(g)		108
			10q26	PTPRE	7	Ptpre	68.0		108

Human/Mouse Homology Mapping Methods

Method	Description
C	High-resolution cytogenetic methods
G	Genetic linkage mapping
G*	Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L	Long-range restriction site mapping
P	Multiple physical methods, including YAC and cosmid contigs
R	Radiation hybrid mapping
X	Multiple sources of high-resolution data

Gene Notes:

Key	Description
a	Gene Bank Accession Number for Mouse EST
b	Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g	Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y	Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p	Different sources of high resolution mapping data give conflicting positions
r	Difference between position in inbred mice vs. Mus spretus
u	This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have