NCBI C Toolkit Cross Reference

C/demo/asn2asn.mk

  1 ########################################################################
  2 #       demo makefile for NCBI applications
  3 #
  4 #   This assumes the following variables are set in a file called "ncbi.mk"
  5 #     which is included by this one. In this case it resides in a directory
  6 #     set by the environment variable "NCBI"
  7 #
  8 #    NCBI_CC = default compiler to use
  9 #    NCBI_CFLAGS1 = default compiler switches (not optimization)
 10 #    NCBI_LDFLAGS1 = default compiler switches when linking (not optimization)
 11 #    NCBI_OPTFLAG = default optimization (-O)
 12 #    NCBI_INCDIR =      default toolkit include paths
 13 #    NCBI_LIBDIR = default toolkit library paths
 14 #    NCBI_ALTLIB  = debugging toolkit library paths
 15 #    NCBI_VIBFLAG = additional include paths/defines for Vibrant apps
 16 #    NCBI_VIBLIBS  = additional libraries needed to link Vibrant apps
 17 #    NCBI_OTHERLIBS = additional libraries needed to link the system
 18 #
 19 #   This enables platform independent makefiles for ncbi toolkit apps. You
 20 #   can change any default behavior by setting the variable on the command
 21 #   line.
 22 #
 23 #   Use gcc complier.   "make NCBI_CC=gcc" or "make CC=gcc"
 24 #   Change optimization to debug
 25 #                "make NCBI_OPTFLAG="-g" NCBI_LIBPATH=$NCBI_ALTLIB"
 26 #                or
 27 #                "make OPTFLAG="-g" LIBPATH=$NCBI_ALTLIB"
 28 #
 29 #   You can also change the behavior permanently in the makefile by changing
 30 #    the assignment of the internal variable to the one from the include
 31 #    file:
 32 #
 33 #   Use gcc compiler.
 34 #    Change   CC=$(NCBI_CC)
 35 #    To       CC=gcc
 36 #    in the makefile itself
 37 #
 38 #   Make debugging version
 39 #    OPTFLAG=-g
 40 #    LIBPATH=$(NCBI_ALTDIR)
 41 #
 42 #   Current settings are:
 43 #   Sun OS:
 44 #    NCBI_CC = acc
 45 #    NCBI_CFLAGS1 = "-c"
 46 #    NCBI_LDFLAGS1 = ""
 47 #    NCBI_OPTFLAG = "-O"
 48 #    NCBI_INCPATH = "/usr/ncbi/include/NCBI"
 49 #    NCBI_LIBPATH = "/usr/ncbi/lib"
 50 #    NCBI_ALTLIB  = "/am/ncbi/altlib"
 51 #    NCBI_VIBFLAG = "-I/am/Motif/include -L/am/Motif/lib -DWIN_MOTIF"
 52 #    NCBI_VIBLIBS  = "-lXm -lXmu -lXt -lX11"
 53 #    NCBI_OTHERLIBS = "-lm"
 54 #
 55 #   Silicon Graphics:
 56 #    NCBI_CC = cc
 57 #    NCBI_CFLAGS1 = "-c"
 58 #    NCBI_LDFLAGS1 = ""
 59 #    NCBI_OPTFLAG = "-O"
 60 #    NCBI_INCPATH = "/usr/ncbi/include/NCBI"
 61 #    NCBI_LIBPATH = "/usr/ncbi/lib"
 62 #    NCBI_ALTLIB  = "/am/ncbi/altlib"
 63 #    NCBI_VIBFLAG = "-I/am/Motif/include -L/am/Motif/lib -DWIN_MOTIF"
 64 #    NCBI_VIBLIBS  = "-lXm -lXmu -lXt -lX11"
 65 #    NCBI_OTHERLIBS = "-lm -lPW -lsun"
 66 #
 67 #   Solaris:
 68 #    NCBI_CC = cc
 69 #    NCBI_CFLAGS1 = "-c -Xa"
 70 #    NCBI_LDFLAGS1 = "-Xa"
 71 #    NCBI_OPTFLAG = "-O"
 72 #    NCBI_INCPATH = "/netopt/ncbi_tools/ver0.0/ncbi/include/NCBI"
 73 #    NCBI_LIBPATH = "/netopt/ncbi_tools/ver0.0/ncbi/lib"
 74 #    NCBI_ALTLIB  = "/netopt/ncbi_tools/ver0.0/ncbi/altlib"
 75 #    NCBI_VIBFLAG = "-I/netopt/X11R5/include -I/netopt/Motif1.2.2/include -L/netopt/X11R5/lib -L/netopt/Motif1.2.2/lib -DWIN_MOTIF"
 76 #    NCBI_VIBLIBS  = "-lXm -lXmu -lXt -lX11"
 77 #    NCBI_OTHERLIBS = "-lm -lsocket -lnsl"
 78 #
 79 #######################################################################
 80 #
 81 # default flags for compiling and loading
 82 #
 83 #######################################################################
 84 
 85 include $(NCBI)/ncbi.mk
 86 
 87 CC = $(NCBI_CC)
 88 CFLAGS1 = $(NCBI_CFLAGS1)
 89 LDFLAGS1 = $(NCBI_LDFLAGS1)
 90 OPTFLAG = $(NCBI_OPTFLAG)
 91 OTHERLIBS = $(NCBI_OTHERLIBS)
 92 VIBLIBS= $(NCBI_VIBLIBS)
 93 VIBFLAG= $(NCBI_VIBFLAG)
 94 INCPATH = $(NCBI_INCDIR)
 95 LIBPATH = $(NCBI_LIBDIR)
 96 
 97 CFLAGS = $(CFLAGS1) $(OPTFLAG) -I$(INCPATH) $(VIBFLAG)
 98 LDFLAGS = -I$(INCPATH) $(OPTFLAG) -L$(LIBPATH) $(VIBFLAG)
 99 
100 # all NCBI libraries aliased for easy access here
101 
102 LIB1 = -lncbi
103 LIB2 = -lncbiobj
104 LIB3 = -lncbicdr
105 LIB4 = -lvibrant
106 LIB5 = -lncbiacc
107 LIB6 = -lnetcli
108 LIB7 = -lnetentr
109 LIB8 = -lncbiNacc
110 LIB9 = -lncbiCacc
111 # LIB10 is reserved for NCSA socket library
112 LIB10 =
113 LIB11 = -lncbimla
114 LIB12 = -lncbitax
115 LIB13 = -lncbiid0
116 LIB14 = -lncbibls1
117 LIB15 = -lncbispel
118 
119 ## To clean out the directory without removing make
120 ##
121 
122 ## Implicit actions
123 ##
124 ## if need a .o, compile the .c
125 ##
126 
127 .c.o :
128         $(CC) $(CFLAGS) $<
129 
130 #####################################################################
131 ##
132 ## Here is where you set up your own things to make
133 ##
134 #####################################################################
135 
136 ## Default thing to make will be "all", in this case it checks that the
137 ## source files exist, then tries to make "testcds"
138 ##
139 
140 
141 all : asn2asn
142 
143 
144 ## make individual applications and components
145 ##
146 
147 ## These are non-vibrant versions
148 
149 asn2asn : asn2asn.c
150         $(CC) -o asn2asn $(LDFLAGS) asn2asn.c $(LIB2) $(LIB1) $(OTHERLIBS)
151 
152 asn2asn.pure : asn2asn.c
153         purify3 $(CC) -o asn2asn.pure $(LDFLAGS) asn2asn.c $(LIB2) $(LIB1) $(OTHERLIBS)
154 
155 ## these are vibrant versions
156 ##
157 
158 asn2asnv : asn2asn.c
159         $(CC) -o asn2asn $(LDFLAGS) asn2asn.c $(LIB4) $(LIB2) $(LIB1) $(OTHERLIBS)
160 
161 asn2asnv.pure : asn2asn.c
162         purify3 $(CC) -o asn2asn.pure $(LDFLAGS) asn2asn.c $(LIB4) $(LIB2) $(LIB1) $(OTHERLIBS)
163
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