NCBI C Toolkit Cross Reference

C/data/KShopp.flt

  1 ;Antigenicity    ; 16 character descriptor
  2 ;2               ; 1=Nucleic  2=Protein
  3 1                ; 1=Filter   2-64=No. Pos. in Matrix
  4 6                ; 3-256=Filter Window  0-100=Percent Cutoff Matrix Output
  5   -0.500   A  Ala
  6    1.600   BB Asx
  7   -1.000   C  Cys   Note: Columns 1-8 must contain 1 numeric value only
  8    3.000   D  Asp
  9    3.000   E  Glu
 10   -2.500   F  Phe
 11    0.000   G  Gly
 12   -0.500   H  His
 13   -1.800   I  Ile
 14    3.000   K  Lys
 15   -1.800   L  Leu
 16   -1.300   M  Met
 17    0.200   N  Asn
 18    0.000   P  Pro
 19    0.200   Q  Gln
 20    3.000   R  Arg
 21    0.300   S  Ser
 22   -0.400   T  Thr
 23   -1.500   V  Val
 24   -3.400   W  Trp
 25   -0.200   X- Unk
 26   -2.300   Y  Tyr
 27    1.600   ZZ Glx
 28   -0.200   ** ***
 29 ;Antigenicity - Hopp and Woods (Hydrophilicity Index)
 30 ;A window of 6 residues is the published (and recomended)
 31 ;value for calculating the moving average

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