NCBI C++ Toolkit Cross Reference

  C++/include/objmgr/unsupp_editsaver.hpp


#ifndef __UNSUPPORTED_EDIT_SAVER__HPP #define __UNSUPPORTED_EDIT_SAVER__HPP /* $Id: unsupp_editsaver.hpp 33815 2007-05-04 17:18:18Z kazimird $ * =========================================================================== * * PUBLIC DOMAIN NOTICE * National Center for Biotechnology Information * * This software/database is a "United States Government Work" under the * terms of the United States Copyright Act. It was written as part of * the author's official duties as a United States Government employee and * thus cannot be copyrighted. This software/database is freely available * to the public for use. The National Library of Medicine and the U.S. * Government have not placed any restriction on its use or reproduction. * * Although all reasonable efforts have been taken to ensure the accuracy * and reliability of the software and data, the NLM and the U.S. * Government do not and cannot warrant the performance or results that * may be obtained by using this software or data. The NLM and the U.S. * Government disclaim all warranties, express or implied, including * warranties of performance, merchantability or fitness for any particular * purpose. * * Please cite the author in any work or product based on this material. * * =========================================================================== * * Author: Maxim Didenko * * File Description: * */ #include <corelib/ncbiobj.hpp> #include <corelib/ncbiexpt.hpp> #include <objmgr/edit_saver.hpp> BEGIN_NCBI_SCOPE BEGIN_SCOPE(objects) class CUnsupportedEditSaverException : public CException { public: enum EErrCode { eUnsupported }; virtual const char* GetErrCodeString(void) const { switch ( GetErrCode() ) { case eUnsupported: return "Unsupported operation"; default: return CException::GetErrCodeString(); } } NCBI_EXCEPTION_DEFAULT(CUnsupportedEditSaverException, CException); }; class NCBI_XOBJMGR_EXPORT CUnsupportedEditSaver : public IEditSaver { public: virtual void AddDescr(const CBioseq_Handle&, const CSeq_descr&, ECallMode); virtual void AddDescr(const CBioseq_set_Handle&, const CSeq_descr&, ECallMode); virtual void SetDescr(const CBioseq_Handle&, const CSeq_descr&, ECallMode); virtual void SetDescr(const CBioseq_set_Handle&, const CSeq_descr&, ECallMode); virtual void ResetDescr(const CBioseq_Handle&, ECallMode); virtual void ResetDescr(const CBioseq_set_Handle&, ECallMode); virtual void AddDesc(const CBioseq_Handle&, const CSeqdesc&, ECallMode); virtual void AddDesc(const CBioseq_set_Handle&, const CSeqdesc&, ECallMode); virtual void RemoveDesc(const CBioseq_Handle&, const CSeqdesc&, ECallMode); virtual void RemoveDesc(const CBioseq_set_Handle&, const CSeqdesc&, ECallMode); //------------------------------------------------------------------ virtual void SetSeqInst(const CBioseq_Handle&, const CSeq_inst&, ECallMode); virtual void SetSeqInstRepr(const CBioseq_Handle&, CSeq_inst::TRepr, ECallMode); virtual void SetSeqInstMol(const CBioseq_Handle&, CSeq_inst::TMol, ECallMode); virtual void SetSeqInstLength(const CBioseq_Handle&, CSeq_inst::TLength, ECallMode); virtual void SetSeqInstFuzz(const CBioseq_Handle& info, const CSeq_inst::TFuzz& fuzz, ECallMode); virtual void SetSeqInstTopology(const CBioseq_Handle& info, CSeq_inst::TTopology topology, ECallMode); virtual void SetSeqInstStrand(const CBioseq_Handle& info, CSeq_inst::TStrand strand, ECallMode); virtual void SetSeqInstExt(const CBioseq_Handle& info, const CSeq_inst::TExt& ext, ECallMode); virtual void SetSeqInstHist(const CBioseq_Handle& info, const CSeq_inst::THist& hist, ECallMode); virtual void SetSeqInstSeq_data(const CBioseq_Handle& info, const CSeq_inst::TSeq_data& data, ECallMode); virtual void ResetSeqInst(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstRepr(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstMol(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstLength(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstFuzz(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstTopology(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstStrand(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstExt(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstHist(const CBioseq_Handle&, ECallMode); virtual void ResetSeqInstSeq_data(const CBioseq_Handle&, ECallMode); //---------------------------------------------------------------- virtual void AddId(const CBioseq_Handle&, const CSeq_id_Handle&, ECallMode); virtual void RemoveId(const CBioseq_Handle&, const CSeq_id_Handle&, ECallMode); virtual void ResetIds(const CBioseq_Handle&, const TIds&, ECallMode); virtual void SetBioseqSetId(const CBioseq_set_Handle&, const CBioseq_set::TId&, ECallMode); virtual void SetBioseqSetColl(const CBioseq_set_Handle&, const CBioseq_set::TColl&, ECallMode); virtual void SetBioseqSetLevel(const CBioseq_set_Handle&, CBioseq_set::TLevel, ECallMode); virtual void SetBioseqSetClass(const CBioseq_set_Handle&, CBioseq_set::TClass, ECallMode); virtual void SetBioseqSetRelease(const CBioseq_set_Handle&, const CBioseq_set::TRelease&, ECallMode); virtual void SetBioseqSetDate(const CBioseq_set_Handle&, const CBioseq_set::TDate&, ECallMode); virtual void ResetBioseqSetId(const CBioseq_set_Handle&, ECallMode); virtual void ResetBioseqSetColl(const CBioseq_set_Handle&, ECallMode); virtual void ResetBioseqSetLevel(const CBioseq_set_Handle&, ECallMode); virtual void ResetBioseqSetClass(const CBioseq_set_Handle&, ECallMode); virtual void ResetBioseqSetRelease(const CBioseq_set_Handle&, ECallMode); virtual void ResetBioseqSetDate(const CBioseq_set_Handle&, ECallMode); //----------------------------------------------------------------- virtual void Attach(const CBioObjectId& old_id, const CSeq_entry_Handle& entry, const CBioseq_Handle& what, ECallMode ); virtual void Attach(const CBioObjectId& old_id, const CSeq_entry_Handle& entry, const CBioseq_set_Handle& what, ECallMode ); virtual void Detach(const CSeq_entry_Handle& entry, const CBioseq_Handle& what, ECallMode ); virtual void Detach(const CSeq_entry_Handle& entry, const CBioseq_set_Handle& what, ECallMode ); virtual void Attach(const CSeq_entry_Handle& entry, const CSeq_annot_Handle& what, ECallMode); virtual void Remove(const CSeq_entry_Handle& entry, const CSeq_annot_Handle& what, ECallMode); virtual void Attach(const CBioseq_set_Handle& handle, const CSeq_entry_Handle& entry, int Index, ECallMode); virtual void Remove(const CBioseq_set_Handle& handle, const CSeq_entry_Handle&, int Index, ECallMode); //----------------------------------------------------------------- virtual void Replace(const CSeq_feat_Handle& handle, const CSeq_feat& old_value, ECallMode); virtual void Replace(const CSeq_align_Handle& handle, const CSeq_align& old_value, ECallMode); virtual void Replace(const CSeq_graph_Handle& handle, const CSeq_graph& old_value, ECallMode); virtual void Add(const CSeq_annot_Handle& handle, const CSeq_feat& obj, ECallMode); virtual void Add(const CSeq_annot_Handle& handle, const CSeq_align& obj, ECallMode); virtual void Add(const CSeq_annot_Handle& handle, const CSeq_graph& obj, ECallMode); virtual void Remove(const CSeq_annot_Handle& handle, const CSeq_feat& old_value, ECallMode); virtual void Remove(const CSeq_annot_Handle& handle, const CSeq_align& old_value, ECallMode); virtual void Remove(const CSeq_annot_Handle& handle, const CSeq_graph& old_value, ECallMode); //----------------------------------------------------------------- virtual void RemoveTSE(const CTSE_Handle& handle, ECallMode); }; END_SCOPE(objects) END_NCBI_SCOPE #endif // __UNSUPPORTED_EDIT_SAVER__HPP

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