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Definitions for ref

Type Member of File Line
function prototype or declaration /include/corelib/ncbimtx.inl 402
function prototype or declaration /include/gui/widgets/seq_graphic/config_utils.hpp 310
named anchor /src/app/cn3d/HelpBlocks/refinerHelp.htm 165
function prototype or declaration /src/app/cn3d/cdd_ref_dialog.cpp 175
function prototype or declaration /src/app/cn3d/data_manager.cpp 792
function prototype or declaration /src/app/cn3d/data_manager.cpp 806
function prototype or declaration /src/app/cn3d/structure_window.cpp 864
function prototype or declaration /src/app/netschedule/ns_handler.hpp 228
function prototype or declaration /src/corelib/test/test_weakref.cpp 55
function prototype or declaration /src/corelib/test/test_weakref.cpp 86
function prototype or declaration /src/corelib/test/test_weakref.cpp 121
function prototype or declaration /src/gui/core/app_dialogs.cpp 347
function prototype or declaration /src/gui/core/document.cpp 352
function prototype or declaration /src/gui/core/search_form_base.cpp 180
function prototype or declaration /src/gui/objects/PluginInfo.cpp 133
function prototype or declaration /src/gui/packages/pkg_alignment/create_needleman_wunsch_tool_manager.cpp 331
function prototype or declaration /src/gui/packages/pkg_sequence/cpg_search_tool.cpp 510
function prototype or declaration /src/gui/packages/pkg_sequence/entrez_search_tool.cpp 258
function prototype or declaration /src/gui/packages/pkg_sequence/orf_search_tool.cpp 559
function prototype or declaration /src/gui/packages/pkg_sequence/snp_search_tool.cpp 215
function prototype or declaration /src/gui/packages/pkg_sequence_edit/correct_genes_dialog.cpp 506
function prototype or declaration /src/gui/widgets/aln_multiple/alnmulti_model.cpp 930
function prototype or declaration /src/gui/widgets/phylo_tree/phylo_tree_scheme.cpp 528
function prototype or declaration /src/gui/widgets/wx/group_map_widget.cpp 172
function prototype or declaration /src/html/node.cpp 121
function prototype or declaration /src/misc/hgvs/objcoords.cpp 387
function prototype or declaration /src/misc/hgvs/objcoords.cpp 841
function prototype or declaration /src/objects/seq/seq_loc_mapper_base.cpp 544
function prototype or declaration /src/objects/seq/seq_loc_mapper_base.cpp 560
function prototype or declaration /src/objects/seq/seq_loc_mapper_base.cpp 576
function prototype or declaration /src/objects/seq/seq_loc_mapper_base.cpp 592
function prototype or declaration /src/objects/seqfeat/Org_ref.cpp 111
function prototype or declaration /src/objtools/data_loaders/genbank/request_result.cpp 102
function prototype or declaration /src/objtools/data_loaders/genbank/request_result.cpp 219
function prototype or declaration /src/objtools/flatfile/asci_blk.cpp 350
function prototype or declaration /src/objtools/format/gather_items.cpp 726
function prototype or declaration /src/objtools/format/gather_items.cpp 733
function prototype or declaration /src/objtools/format/gather_items.cpp 837
function prototype or declaration /src/objtools/format/gather_items.cpp 898
function prototype or declaration /src/objtools/readers/rm_reader.cpp 500
function prototype or declaration /src/objtools/readers/source_mod_parser.cpp 1930
function prototype or declaration /src/objtools/readers/source_mod_parser.cpp 1937
function prototype or declaration /src/objtools/readers/source_mod_parser.cpp 1944
function prototype or declaration /src/objtools/validator/validerror_align.cpp 1323
function prototype or declaration /src/objtools/validator/validerror_bioseq.cpp 5280
function prototype or declaration /src/objtools/validator/validerror_bioseq.cpp 6147
function prototype or declaration /src/objtools/validator/validerror_bioseq.cpp 6183
function prototype or declaration /src/serial/soap/soap_readhook.cpp 69
function prototype or declaration /src/sra/readers/sra/vdbread.cpp 1529

49 declarations in 34 files.

References to ref

File Line
/compilers/xcode30_prj/postbuild.sh 49 50
/include/corelib/atomic_util.hpp 376 378
/include/corelib/ncbi_autoinit.hpp 312 313 314 325 326 327 328
/include/corelib/ncbi_pool_balancer.hpp 103
/include/corelib/ncbimtx.inl 402 404
/include/corelib/ncbiobj.hpp 659 660 668 669 669 675 676 678 679 685 686 686 688 689 754 756 758 760 761 869 871 890 894 898 903 905 912 914 919 923 928 928 929 936 938 938 939 1306 1307 1315 1316 1316 1322 1323 1325 1326 1332 1333 1333 1335 1336 1342 1343 1343 1351 1352 1352 1354 1355 1420 1422 1424 1426 1427 1535 1537 1556 1560 1564 1569 1571 1578 1581 1586 1590 1595 1595 1596 1603 1605 1605 1606 1613 1615 1622 1624 1624 1625 2064 2065 2072 2073 2078 2079 2086 2087 2089 2099 2101 2108 2110 2115 2117 2124 2126 2127 2150 2152 2196 2197 2204 2205 2210 2211 2218 2219 2221 2227 2228 2235 2236 2238 2242 2244 2251 2253 2258 2260 2267 2269 2270 2277 2279 2286 2288 2289 2312 2314 2566 2568 2571 2609 2611 2614 2748 2750 2751 2856 2858
/include/gui/objutils/snp_gui.hpp 169 176
/include/gui/packages/pkg_sequence_edit/discrepancy_dlg.hpp 332
/include/gui/widgets/seq_graphic/config_utils.hpp 310 311 312
/include/html/node.hpp 164
/include/html/node.inl 141 143
/include/misc/hgvs/variation_util2.hpp 330
/include/objmgr/impl/annot_collector.hpp 252 253 254 256 929 931 932 934 935 937 942 944 945 946 951 953 1006 1008 1009 1010 1011
/include/objmgr/impl/seq_loc_cvt.hpp 120 123 126 182 199 377 380 383
/include/objmgr/seq_map.hpp 288
/include/objmgr/tse_handle.hpp 257 258 266 268 277 279
/include/objtools/format/genbank_formatter.hpp 113 114 115 116 117 118 119 120
/include/objtools/format/item_formatter.hpp 153
/include/objtools/readers/cigar.hpp 87
/include/objtools/readers/source_mod_parser.hpp 309 310 311 318 319 320 327 328 329 339 340 341 348 349 350
/include/objtools/validator/single_feat_validator.hpp 110
/include/objtools/variation/variation_utils.hpp 64 65
/include/objtools/writers/vcf_writer.hpp 68 104
/include/serial/objhook.hpp 594 595
/include/sra/data_loaders/csra/impl/csraloader_impl.hpp 243
/include/sra/readers/bam/bamread_base.hpp 199 200 203 205 207 262 264
/include/sra/readers/sra/sdk.hpp 97 98 102 104 105 108 110 112 116 120 126 127 182 184
/include/sra/readers/sra/vdbread.hpp 461 462 670 674 674 674 741 746 746 746 813 815 840 845 845 845 912 914 945 946 1023 1024
/include/util/bitset/bm.h 156 157 158 160 168 170 180 182
/include/util/bitset/bmsparsevec.h 127 129 137 138
/include/util/bitset/bmsparsevec_compr.h 107 108
/include/util/bitset/bmstrsparsevec.h 150 151 183 186 195 196
/include/util/mutex_pool.hpp 219 221
/src/algo/align/util/tabular_fmt.cpp 1311 1313
/src/algo/blast/unit_tests/api/seqalign_cmp.cpp 114 117 316 324 332 342 352 361 370 384 394 401 401 430 439
/src/algo/blast/unit_tests/api/seqalign_cmp.hpp 116 160
/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp 291 294 296
/src/algo/seqqa/blastp_tests.cpp 90 93 96 99 106 122 154 176
/src/algo/seqqa/prot_prod_tests.cpp 81 84 87 90 96 104 107 110 113 140 184 187 190 193 249
/src/algo/seqqa/seq_id_tests.cpp 56 59 62 84 90
/src/algo/seqqa/seqtest.cpp 74 77 87 88 114 118 190 192 212 213 215 215 233 236 236 238
/src/algo/seqqa/single_aln_tests.cpp 176 179 189 192 760
/src/algo/seqqa/xcript_tests.cpp 83 86 89 92 103 368 371 374 377 383 697 700 703 706 786 811 814 817 820 879
/src/algo/sequence/demo/xcompareannotsdemo.cpp 1494 1495 1495 1495 1495 1496
/src/app/asn_cache/prime_cache.cpp 1106 1107 1114 1116
/src/app/asnval/thread_state.cpp 796
/src/app/cn3d/cdd_annot_dialog.cpp 1433 1435 1436
/src/app/cn3d/cdd_ref_dialog.cpp 175 176 184
/src/app/cn3d/data_manager.cpp 792 793 806 807
/src/app/cn3d/structure_window.cpp 864 865
/src/app/convert_seq/gff_reader.cpp 221 223 225 227 227 229 231 1466 1468 1470 1472 1472 1474 1476
/src/app/dblb/ncbi_dblb_cli.cpp 259 260 260 261 345 346 346 347 351 352
/src/app/netcache/srv_ref.hpp 59 60 63 65
/src/app/netschedule/ns_handler.cpp 999 1000 1001
/src/app/netschedule/ns_handler.hpp 228 229 230
/src/app/oligofar/bmtagger.sh 3 48
/src/app/oligofar/csammdformatter.cpp 85 86 87
/src/app/oligofar/tests/set1/test-oligofar.sh 18 21 32
/src/app/oligofar/tseqref.hpp 27 27 28 28 29 29
/src/app/pubseq_gateway/client/processing.cpp 837 838 841 842 843 1124 1125 1126 1133 1134 1318 1318 1711 1845 1856 1859 1862 1865 1874 1877 1903 1914 1917 1920 1923 1949 1960 1963 1966 1972 1975 2001 2012 2015 2018 2021 2027 2030 2033 2071 2082 2085 2088 2114 2134 2137 2177 2191 2194 2218 2221 2224 2227 2230 2233 2236
/src/cgi/cgiapp.cpp 707 708 709 710 2467 2468 2470 2472
/src/connect/mbedtls/pkparse.c 263 266 270 271 274 274 275 276 277 278 279 280 282 288
/src/connect/mbedtls/psa/crypto_values.h 1361 1363 1364
/src/connect/ncbi_http_connector.c 2789 2792 2793 2793 2794 2795 2797 2799 2801 2802 2821 2869 2871 2890
/src/connect/ncbi_usage_report.cpp 440
/src/corelib/ncbi_pool_balancer.cpp 96 111 162 180 204 236 292 319 323 336 350 397
/src/corelib/ncbi_process.cpp 1778 1782 1788 1789 1792 1796 1855 1871 1874 1880 1889
/src/corelib/test/test_resource_info.cpp 87 92
/src/corelib/test/test_tls_object.cpp 1052 1054 1057
/src/corelib/test/test_weakref.cpp 55 56 66 70 71 72 73 76 86 87 96 100 101 102 103 106 121 122 132 136 137 138 139 142 187 188 198 202 203 204 205 208 219 220 230 234 235 236 237 240
/src/gui/config/settings_set.cpp 156 159 161 162 164 368 369 372 379 380 383 390 391 394 401 402 405 412 413 414 422 423 424 432 433 434 447 448 451 453
/src/gui/core/app_dialogs.cpp 347 348
/src/gui/core/document.cpp 352 362
/src/gui/core/project_converters.cpp 62 64
/src/gui/core/search_form_base.cpp 180 181
/src/gui/core/search_tool_base.cpp 226 227
/src/gui/framework/app_task_service.cpp 327 328 335 337
/src/gui/objects/PluginInfo.cpp 133 134 135 136
/src/gui/objects/WorkspaceFolder.cpp 231 232 238 240
/src/gui/objutils/attached_handles.cpp 105 106
/src/gui/objutils/basic_converters.cpp 540 542 992 993
/src/gui/objutils/macro_engine_parallel.cpp 1124 1124
/src/gui/objutils/object_index.cpp 615 616 695 696 709 710
/src/gui/objutils/snp_gui.cpp 719 721 725 728 743 745 750 752 752 755
/src/gui/packages/pkg_alignment/align_span_view.cpp 401 407 408 415 416 423 424
/src/gui/packages/pkg_alignment/create_needleman_wunsch_tool_manager.cpp 331 334 338 339 340 343 359 364
/src/gui/packages/pkg_alignment/net_blast_dm_search_tool.cpp 327 350 352
/src/gui/packages/pkg_sequence/component_search_tool.cpp 218 259 260
/src/gui/packages/pkg_sequence/cpg_search_tool.cpp 510 517
/src/gui/packages/pkg_sequence/entrez_search_tool.cpp 258 259
/src/gui/packages/pkg_sequence/feature_search_tool.cpp 389 390 393
/src/gui/packages/pkg_sequence/orf_search_tool.cpp 559 564
/src/gui/packages/pkg_sequence/sequence_search_tool.cpp 377 378 415 416 420
/src/gui/packages/pkg_sequence/snp_search_tool.cpp 215 216
/src/gui/packages/pkg_sequence/vcf_search_tool.cpp 223 236 237
/src/gui/packages/pkg_sequence_edit/correct_genes_dialog.cpp 506 507
/src/gui/packages/pkg_sequence_edit/discrepancy_dlg.cpp 1748 1750 1754 1759
/src/gui/utils/app_job/test_client.cpp 112 113 191 192
/src/gui/utils/app_job_dispatcher.cpp 207 208
/src/gui/utils/muparser/muParserDLL.cpp 86 87
/src/gui/widgets/aln_crossaln/layout.cpp 357 368 412 418
/src/gui/widgets/aln_multiple/align_row.cpp 655 657
/src/gui/widgets/aln_multiple/alnmulti_model.cpp 930 931 933
/src/gui/widgets/aln_table/annot_compare_ds.cpp 87 88 571 572
/src/gui/widgets/aln_table/demo/demo_align_table_frame.cpp 308 309
/src/gui/widgets/hit_matrix/align_seq_table.cpp 87 88
/src/gui/widgets/loaders/columnar_vcf_reader.cpp 314
/src/gui/widgets/loaders/columnar_vcf_variants_base.cpp 1491
/src/gui/widgets/loaders/fasta_object_loader.cpp 201 202
/src/gui/widgets/phylo_tree/phylo_tree_scheme.cpp 528 529 533
/src/gui/widgets/seq_graphic/layered_layout_policy.cpp 154 155 155 174 175 184 186 188
/src/gui/widgets/seq_graphic/segment_map_ds.cpp 614 629 630 633 634 637
/src/gui/widgets/wx/dock_layout.cpp 143 144 175 176 234 235
/src/gui/widgets/wx/group_map_widget.cpp 172 173 179
/src/gui/widgets/wx/map_control.cpp 319 321 323 417 419 421 427 429 431
/src/gui/wx_demo/test_client.cpp 113 114
/src/html/node.cpp 121 145
/src/misc/discrepancy/discrepancy_context.cpp 796 799 807
/src/misc/discrepancy/discrepancy_core.cpp 452 454 459 461 464
/src/misc/discrepancy/discrepancy_core.hpp 430 836 837 851 851 851 851 852 853 901
/src/misc/discrepancy/discrepancy_stream.cpp 501 503 507 508 510 512 512 515 515 518 518 521
/src/misc/hgvs/objcoords.cpp 137 139 387 388 389 390 391 392 393 397 405 409 423 439 506 514 515 517 522 524 533 557 560 575 582 585 587 607 608 609 610 611 841 861 862 863 864 865 867
/src/misc/hgvs/variation_util2.cpp 1721 1725 1726 1727 1730 1735 1736
/src/misc/netstorage/test/test_netstorage.cpp 1481 2036
/src/objects/gbproj/AbstractProjectItem.cpp 142 157 157 159
/src/objects/gbproj/ProjectFolder.cpp 268 270 277 279 319 321 328 329
/src/objects/general/User_object.cpp 75 76 80
/src/objects/seq/seq_id_tree.cpp 768 772 773 791 794 795
/src/objects/seq/seq_loc_mapper_base.cpp 544 545 546 560 561 562 576 577 578 592 593 594
/src/objects/seqalign/Seq_align.cpp 565 566 567 568 570 582 583 584 585 587 626 627 632 633 638 639 644 645
/src/objects/seqfeat/Org_ref.cpp 111 112 113 114
/src/objects/seqfeat/Seq_feat.cpp 197 198 198 199 212 213 213 214 238 239 239 240 254 255 255 256
/src/objects/seqfeat/Variation_ref.cpp 854 888 895 903 906 909 910 911 961 962 963 964
/src/objects/taxon1/cache.hpp 184 185
/src/objmgr/annot_collector.cpp 734 736 2494 2496 2497
/src/objmgr/bioseq_info.cpp 1116 1118 1123
/src/objmgr/data_source.cpp 335 347
/src/objmgr/seq_loc_cvt.cpp 971 975 987 1060 1064 1078 1124 1130 1156 1162 1165 1173 1176 1177 1181 1200 1209 1263 1267 1274 1275 1279 1298 1307 1378 1382 1385 1533 1537 1549 1616 1620 1634 1679 1685 1688 1705 1715 1717 1728 1729 1737
/src/objmgr/seq_loc_mapper.cpp 635 641 642 645 652 655 656 658 664 669 675 676 686 689 690 691 693 699 704 714 715 718
/src/objmgr/seq_map.cpp 141 150 1293 1295 1296 1297 1297 1301 1303 1304 1304 1305 1305 1309 1311
/src/objmgr/seqdesc_ci.cpp 95 96
/src/objmgr/snp_annot_info.cpp 496 498 498 499 501
/src/objmgr/test/test_objmgr_sv.cpp 473 474 475 480
/src/objmgr/tse_handle.cpp 887 890 891 893 894 901 904 905 907 908 915 919 920 922 923 930 934 935 937 938 961 964 968 971
/src/objmgr/util/sequence.cpp 2066 2067 2068 2074 2153 2154 2155 2164 2214 2216 2277 2292
/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp 234 246 289 299 301 317 325 327
/src/objtools/alnmgr/sparse_aln.cpp 456 457 457
/src/objtools/data_loaders/genbank/psg_loader_impl.cpp 748 750 752 1274 1370 1370 2238 2238 2325 2325 3405 3405 3436 3436 3468 3468 3497 3497 3526 3526 3556 3556 3585 3585 3621 3621 3621
/src/objtools/data_loaders/genbank/request_result.cpp 102 104 107 109 219 221 224 226
/src/objtools/data_loaders/genbank/test/Makefile.test_bulkinfo.app 11 13 14 15 16 17 18 19 20 21 22 23 25 26 27 28 29 30 31 33 34 35 36 38 39 40 42 43 45 46 47 48 50 51 52 53 54 55 56 57 58 59 60
/src/objtools/data_loaders/genbank/test/Makefile.test_bulkinfo_mt.app 13 14 15 16 17 18 19 20 21 22 23 25 26 27 28 29 30 31 33 34 35 36 38 39 40 42 43 45 46 47 48 50 51 52 53 54 55 56 57 58 59 60
/src/objtools/data_loaders/genbank/wgsmaster.cpp 532 533 537
/src/objtools/eutils/efetch/PubmedArticle.cpp 331 333 336 337 337 338 338
/src/objtools/flatfile/Makefile.flatfile.lib 30
/src/objtools/flatfile/asci_blk.cpp 350 359 359 360 362
/src/objtools/format/embl_formatter.cpp 332
/src/objtools/format/ftable_formatter.cpp 57
/src/objtools/format/gather_items.cpp 726 728 733 735 837 839 898 899 956 957
/src/objtools/format/gbseq_formatter.cpp 730 743 745 748 761 762 775 776 778 779 780 784 789 798 807 808 810 811 821
/src/objtools/format/genbank_formatter.cpp 758 763 766 795 804 808 810 814 815 816 817 818 819 820 822 823 829 890 895 896 915 918 927 931 932 938 959 968 971 972 973 983 986 987 988 998 1002 1005 1015 1021 1024 1042 1045 1048 1064 1069 1071 1077 1081 1082
/src/objtools/format/item_formatter.cpp 707 709 710 710 712 800 802 802 804 841 847 851 975 977 977 979 1008 1012 1014 1050 1054 1058 1151 1153 1155 1313 1317 1323 1366 1402 1407 1410 1447 1455 1457 1458 1463 1464 1469 1470 1475 1475 1476 1481 1482 1482 1483 1488 1488 1489 1494 1495
/src/objtools/pubseq_gateway/client/psg_client_transport.hpp 848 848
/src/objtools/pubseq_gateway/client/test/test_psg_client_impl.cpp 438
/src/objtools/readers/cigar.cpp 164 200 202 211 211 219 222 222
/src/objtools/readers/gff2_reader.cpp 1340 1341 1341 1344 1355 1356 1356 1359
/src/objtools/readers/rm_reader.cpp 500 501 502
/src/objtools/readers/source_mod_parser.cpp 1930 1931 1937 1938 1944 1945
/src/objtools/readers/source_mod_parser.hpp 309 310 311 318 319 320 327 328 329 339 340 341 348 349 350
/src/objtools/snputil/snp_utils.cpp 116 117 118
/src/objtools/test/objmgr/test_annot_ci.cpp 114 117 127 155 156 157 159 161 163
/src/objtools/test/objmgr/test_feat_tree.sh 28
/src/objtools/validator/single_feat_validator.cpp 2216 2218 2218
/src/objtools/validator/validerror_align.cpp 1323 1324
/src/objtools/validator/validerror_bioseq.cpp 5280 5281 6147 6148 6183 6184 7137 7139 7139 7179 7180
/src/objtools/variation/process/analyze-shift.cpp 168 176 184 188
/src/objtools/variation/test/reference_allele_fix/test-reference_allele_fix.cpp 156 158 159 196 198 199
/src/objtools/variation/test/shift/test-shift.cpp 87 260 273 449 451 452 453 454
/src/objtools/variation/variation_utils.cpp 695 706 714 716 726 731 738 740 750 754 763 766 778 781 957 959 960 1171 1173 1174 1948 1950 1988 1990 1992
/src/objtools/writers/gff3_idgen.cpp 314 315 318
/src/objtools/writers/vcf_writer.cpp 313 328 373 379 385 460 582 593 595 603 605 746 747 747 747 752
/src/serial/datatool/classstr.cpp 81 175 178 185 198 333 502 1275 1300 1317 1357 1450 1450 1451 1497 1851 1853 1853
/src/serial/datatool/classstr.hpp 59
/src/serial/datatool/dtdaux.cpp 400 401 402
/src/serial/datatool/dtdparser.cpp 991 997 1007 1011 1020 1031 1042
/src/serial/datatool/enumstr.cpp 254 257 258 260 262 264 265 267
/src/serial/datatool/generate.cpp 1228 1230 1231
/src/serial/datatool/generate.hpp 177
/src/serial/datatool/jsdparser.cpp 534 535
/src/serial/datatool/traversal_code_generator.cpp 709 710
/src/serial/datatool/traversal_node.cpp 144 146
/src/serial/datatool/typestr.hpp 145 146
/src/serial/datatool/wsdlstr.cpp 159 179
/src/serial/datatool/xsdparser.cpp 571 589 591 598 640 1046 1055 1086
/src/serial/objistr.cpp 1081 1084 1092 1159 1162 1170 1182 1185 1193
/src/serial/objistrasnb.cpp 1910 1913 1921 1933 1936 1944
/src/serial/soap/soap_readhook.cpp 69 70
/src/sra/data_loaders/csra/csraloader_impl.cpp 141 143 144 145 147 782 783 786 789 794 801 881 945 1355 1358
/src/sra/data_loaders/csra/test/test_csra_loader.cpp 2029 2031 2032 2035 2041 2054 2111 2113 2114 2117 2123 2136 2206 2208 2209 2212 2218 2231 2300 2302 2303 2306 2312 2325 2396 2398 2399 2402 2408 2421
/src/sra/data_loaders/snp/snploader_impl.cpp 962
/src/sra/data_loaders/vdbgraph/vdbgraphloader_impl.cpp 601
/src/sra/data_loaders/wgs/wgsloader_impl.cpp 570 1166 1181
/src/sra/readers/bam/bamindex.cpp 1769 1772 1777 1790 1791 1794 1802 1804 1807 1821 1823 1824 1835 1847
/src/sra/readers/bam/test/bam_test.cpp 320 323 327 327 340
/src/sra/readers/bam/test/bamindex_test.cpp 283 285 379 382 514 517 750 753
/src/sra/readers/sra/csraread.cpp 304 311 321 323 324 324 328 329 331 340 344 348 599 600 603 696 699 701 702 704 727 731 737 743 831 840 844 848 857 858 865 881 884 887 913 941 943 953 957 966
/src/sra/readers/sra/snpread.cpp 2524 2526 2528
/src/sra/readers/sra/test/csra_span_check.cpp 102 165 345 458 460 460 464 467 469 476 501 536 537 537 541 544 557 558 562
/src/sra/readers/sra/vdbread.cpp 1529
/src/util/bitset/stress_test/stress32.cpp 16442 16443 16450
/src/util/bitset/stress_test/stress64.cpp 458 459 467 16933 16934 16940 16941
/src/util/regexp/pcre_jit_compile.c 6922 6928 6943 6977 7023 7036 7080 7088 7103 7106 7124 7160 7161 7171 7186 7204 9922 9925 9940
/src/util/test/test_histogram_mt.cpp 115
/src/util/test/test_staticmap.cpp 190 194 195 202 205 205 207 210 213 214 215 222 222 223 223 225 226 227 228 347 348 349 361 437 438 443 480 481 483 494 585 586 591

1815 references in 213 files.