Search Toolkit Book for Blast_ExtendWord
Structure for keeping initial word extension information. More...
#include <algo/blast/core/blast_extend.h>
Collaboration diagram for Blast_ExtendWord:
Public Attributes | |
| BLAST_DiagTable * | diag_table |
| Diagonal array and related parameters. More... | |
| BLAST_DiagHash * | hash_table |
| Hash table and related parameters. More... | |
Detailed Description
Structure for keeping initial word extension information.
Definition at line 109 of file blast_extend.h.
Member Data Documentation
◆ diag_table
| BLAST_DiagTable* Blast_ExtendWord::diag_table |
Diagonal array and related parameters.
Definition at line 110 of file blast_extend.h.
Referenced by Blast_ExtendWordExit(), BlastAaWordFinder(), BlastExtendWordFree(), BlastExtendWordNew(), BlastRPSWordFinder(), BOOST_AUTO_TEST_CASE(), s_BlastAaWordFinder_OneHit(), s_BlastAaWordFinder_TwoHit(), s_BlastNaExtend(), s_BlastNaExtendAligned(), s_BlastNaExtendDirect(), s_BlastRPSWordFinder_OneHit(), s_BlastRPSWordFinder_TwoHit(), s_BlastSmallNaExtend(), and s_BlastSmallNaExtendAlignedOneByte().
◆ hash_table
| BLAST_DiagHash* Blast_ExtendWord::hash_table |
Hash table and related parameters.
Definition at line 111 of file blast_extend.h.
Referenced by Blast_ExtendWordExit(), BlastExtendWordFree(), BlastExtendWordNew(), s_BlastNaExtend(), s_BlastNaExtendAligned(), s_BlastNaExtendDirect(), s_BlastSmallNaExtend(), and s_BlastSmallNaExtendAlignedOneByte().
The documentation for this struct was generated from the following file:
- include/algo/blast/core/blast_extend.h
