src/app/blast/rpstblastn_app.cpp File Reference

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Detailed Description

RPS TBLASTN command line application.

Definition in file rpstblastn_app.cpp.

#include <ncbi_pch.hpp>
#include <corelib/ncbiapp.hpp>
#include <algo/blast/api/local_blast.hpp>
#include <algo/blast/api/remote_blast.hpp>
#include <algo/blast/blastinput/blast_fasta_input.hpp>
#include <algo/blast/blastinput/rpstblastn_args.hpp>
#include <algo/blast/api/objmgr_query_data.hpp>
#include <algo/blast/format/blast_format.hpp>
#include "blast_app_util.hpp"
#include <objtools/blast/seqdb_reader/seqdb.hpp>

Include dependency graph for rpstblastn_app.cpp:

Go to the source code of this file.

Classes
class	CRPSTBlastnApp
Functions
	USING_SCOPE (blast)
	USING_SCOPE (objects)
int	main (int argc, const char *argv[])
Variables
static char const	rcsid []
	USING_NCBI_SCOPE

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Function Documentation

int main (  int  argc, const char *  argv[] )

Definition at line 185 of file rpstblastn_app.cpp. References eDS_Default.

USING_SCOPE (  objects   )

USING_SCOPE (  blast   )

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Variable Documentation

char const rcsid[] [static]

Initial value: "$Id: rpstblastn_app.cpp 167662 2009-08-05 14:04:15Z camacho $" Definition at line 35 of file rpstblastn_app.cpp.

USING_NCBI_SCOPE

Definition at line 51 of file rpstblastn_app.cpp.

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