src/algo/blast/api/psiblast_impl.cpp File Reference

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Detailed Description

Implements implementation class for PSI-BLAST and PSI-BLAST 2 Sequences.

Definition in file psiblast_impl.cpp.

#include <ncbi_pch.hpp>
#include "psiblast_impl.hpp"
#include "psiblast_aux_priv.hpp"
#include <algo/blast/api/psiblast_options.hpp>
#include <algo/blast/api/prelim_stage.hpp>
#include <algo/blast/api/traceback_stage.hpp>
#include <algo/blast/api/setup_factory.hpp>
#include <algo/blast/api/blast_exception.hpp>
#include <algo/blast/api/objmgrfree_query_data.hpp>
#include <algo/blast/api/blast_seqinfosrc.hpp>
#include <objects/seqset/Seq_entry.hpp>
#include <objects/scoremat/Pssm.hpp>
#include <objects/scoremat/PssmFinalData.hpp>
#include <objects/scoremat/PssmWithParameters.hpp>

Include dependency graph for psiblast_impl.cpp:

Go to the source code of this file.

Functions
	USING_SCOPE (objects)
Variables
static char const	rcsid []

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Variable Documentation

char const rcsid[] [static]

Initial value: "$Id: psiblast_impl.cpp 161402 2009-05-27 17:35:47Z camacho $" Definition at line 2 of file psiblast_impl.cpp.

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