src/algo/blast/api/objmgrfree_query_data.cpp File Reference

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Detailed Description

NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed.

Definition in file objmgrfree_query_data.cpp.

#include <ncbi_pch.hpp>
#include <algo/blast/api/blast_options.hpp>
#include <algo/blast/api/blast_exception.hpp>
#include <algo/blast/api/objmgrfree_query_data.hpp>
#include <serial/iterator.hpp>
#include <objects/seqset/Seq_entry.hpp>
#include "blast_setup.hpp"
#include "bioseq_extract_data_priv.hpp"

Include dependency graph for objmgrfree_query_data.cpp:

Go to the source code of this file.

Classes
class	CObjMgrFree_LocalQueryData
class	CObjMgrFree_RemoteQueryData
Functions
	USING_SCOPE (objects)
static IRemoteQueryData::TSeqLocs	s_ConstBioseqSetToSeqLocs (CConstRef< CBioseq_set > bioseq_set)
	Convert a constant reference to a Bioseq-set to IRemoteQueryData::TSeqLocs.
CRef< CBioseq_set >	x_BioseqSetFromBioseq (const CBioseq &bioseq)
	Auxiliary function to convert a CBioseq into a CRef<CBioseq_set>.
Variables
static char const	rcsid []

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Variable Documentation

char const rcsid[] [static]

Initial value: "$Id: objmgrfree_query_data.cpp 103491 2007-05-04 17:18:18Z kazimird $" Definition at line 2 of file objmgrfree_query_data.cpp.

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