NCBI C++ ToolKit Modules

Here is a list of all modules:

• CORELIB
  • Application Framework
  • Command-Line Argument Processing
  • Atomic Counters
  • Debugging Macros
  • Run-Time Diagnostics
  • Access To Shell Environment
  • File System Access
  • Smart Pointers with Reference Counting
  • Fixed-Size Types and Their Limits
  • DLL Support
  • Plugin Creation and Usage Framework
  • Configuration Utilities
  • Process Creation and Execution
  • Exceptions Hierarchy
  • Application Registry
  • NCBI Namespaces Etc
  • C++ IOStream Fixups And Utilities
  • String Manipulations
  • STL-related And Other Template Utilities
  • Threads
  • Time And Date
  • Versioning
  • Tree Templates
  • MT-safety Testing Framework
  • Process Management
  • Parameters Storage
• CONNECT
  • Buffering Services
  • Connection Exceptions
  • Connection Streams
  • Connectors
  • Portable Pipes
  • Sendmail
  • Service Support
  • Socket Services
  • Utility Functions
  • Email Diagnostic Handler
  • Threaded Server
  • Socket reader-writer
  • General Purpose Network Infrastructure Services
    • Client API to NCBI NetCache
    • Client API to NCBI NetSchedule
• BDB
  • BDB library field types
  • BDB library BLOB support
  • BDB library BLOB Cache
  • BDB library files and cursors
  • BDB library map templates
  • BDB library utilities
  • BDB library queries
• DBAPI
  • Database APIs
  • Driver Manager
  • Variant exception and data type
  • Database Exceptions
  • Database Server Interfaces
  • Database Server Public Interfaces
  • Database Types
  • Drivers' Registration
• CGI
  • CGI Base Classes
  • CGI Command APIs
  • CGI Exception
  • CGI Request/Response APIs
  • Cookie Affinity Services
• HTML
  • Creation Factory
  • Diagnostic Handler
  • HTML Helper and Utility Functions
  • HTML Page Components
  • HTML Stream
  • Pager Classes
  • Tag Mapper Classes
  • HTML Exception
• UTIL
  • Generic Cache
  • Checksum
  • Console Debug Dump Viewer
  • Interval Search Tree
  • Lightweight String
  • Linked Set
  • Random Number Generation
  • Range Support
  • Regular Expressions
  • Registry-based DNS
  • Resizing Iterator
  • Rotating Log Streams
  • Stream Support
  • String Search
  • Threaded Pools for Request Handling
  • UTF-8 Conversion
  • Utility Exceptions
  • Weak Map Template
  • Query Parser and Query Tree
  • Transactions and Transactional Objects
  • BLAST Formatting
• SERIAL
  • Fields for Complex ASN types
  • Generated Classes Support
  • Hook Support
  • Object Hierarchy Iterator
  • Object Stream Support
  • Serialization Definition
  • Serial Exception
  • Type Info Classes for C Toolkit
  • Type Info Classes for C++ Toolkit
  • Type Lookup
  • User Code Support
• OBJECTS
  • Seq-loc Management
  • Seq-id Management
• OBJECT MANAGER
  • Object Manager Core Classes
  • Handles
  • Sequence Representations
  • Iterators
• OBJUTIL
  • Sequence utilities
  • Seq-loc utilities
  • Seq-align utilities
  • Feature utilities
  • Sequence weight
• CTOOLS
  • C/C++ Toolkit Bridge
  • ASN Streams Connection
  • ASN Converter
• ALGORITHMS
  • BLAST (Basic Local Alignment Search Tool)
  • Global Alignment Exceptions
  • Global Alignment Formatter
  • Generic Global(Needleman-Wunsch) Alignment
  • Linear Space Global Alignment
  • Spliced cDna-to-Genomic Alignment
• GUI Framework
  • GUI Math Classes and Modules
  • GUI Utility Classes and Modules
  • GUI Graph Rendering Classes and Modules
  • GUI Object Utility Classes and Modules
  • GUI Configuration Classes and Modules
  • GUI Widget Classes and Modules
    • Simple Extensions and Wrappers Wround FLTK
    • Simple OpenGL Widgets and Utilities
    • Sequence Viewer Widgets and Utilities
    • Alignment Viewer Widgets and Utilities
    • Miscellaneous Widgets
  • GUI OpenGL Classes and Modules
  • MESA Off-Screen Rendering Classes and Modules
  • GUI Core Classes and Modules
    • Plugin Architecture Support Classes
    • Document/View Architecture Support Classes
  • GUI Plugin Interface Classes and Modules
  • GUI Algorithm Plugin Classes and Modules
    • Basic / Intrinsic Plugin Libraries
    • Alignment Generation Plugins
  • GUI Data Loader Plugin Classes and Modules
    • Basic Data Loaders
  • GUI View Plugin Classes and Modules
    • Alignment Viewers
    • Graphical Sequence Viewers
    • Text-based Sequence Viewers
    • Tree Viewers
  • Genome Workbench Classes and Modules
• MISC
  • Miscellaneous
  • DLL Export/Import Defines for MS Windows
• DatatoolGeneratedClasses
  • Code generated by DATATOOL from 'gnomon.asn' (module 'NCBI-GNOMON')
  • Code generated by DATATOOL from 'mzData.dtd' (module 'mzData')
  • Code generated by DATATOOL from 'mzML.dtd' (module 'mzML')
  • Code generated by DATATOOL from 'mzXML.dtd' (module 'mzXML')
  • Code generated by DATATOOL from 'pepXML.dtd' (module 'pepXML')
  • Code generated by DATATOOL from 'sample_asn.asn' (module 'NCBI-Sample-ASN')
  • Code generated by DATATOOL from 'soap_dataobj.xsd' (module 'soap_dataobj')
  • Code generated by DATATOOL from 'gui_objects.asn' (module 'NCBI-Data-Handle')
  • Code generated by DATATOOL from 'gui_objects.asn' (module 'NCBI-GBenchService')
  • Code generated by DATATOOL from 'gui_objects.asn' (module 'NCBI-GUI-Project')
  • Code generated by DATATOOL from 'gui_objects.asn' (module 'NCBI-Plugin')
  • Code generated by DATATOOL from 'access.asn' (module 'NCBI-Access')
  • Code generated by DATATOOL from 'biblio.asn' (module 'NCBI-Biblio')
  • Code generated by DATATOOL from 'biotree.asn' (module 'NCBI-BioTree')
  • Code generated by DATATOOL from 'blast.asn' (module 'NCBI-Blast4')
  • Code generated by DATATOOL from 'blastdb.asn' (module 'NCBI-BlastDL')
  • Code generated by DATATOOL from 'blastxml.asn' (module 'NCBI-BlastOutput')
  • Code generated by DATATOOL from 'cdd.asn' (module 'NCBI-Cdd')
  • Code generated by DATATOOL from 'cn3d.asn' (module 'NCBI-Cn3d')
  • Code generated by DATATOOL from 'docsum.asn' (module 'Docsum-3-0')
  • Code generated by DATATOOL from 'entrez2.asn' (module 'NCBI-Entrez2')
  • Code generated by DATATOOL from 'entrezgene.asn' (module 'NCBI-Entrezgene')
  • Code generated by DATATOOL from 'featdef.asn' (module 'NCBI-FeatDef')
  • Code generated by DATATOOL from 'gbseq.asn' (module 'NCBI-GBSeq')
  • Code generated by DATATOOL from 'general.asn' (module 'NCBI-General')
  • Code generated by DATATOOL from 'genome_collection.asn' (module 'NCBI-GenomeCollection')
  • Code generated by DATATOOL from 'homologene.asn' (module 'HomoloGene')
  • Code generated by DATATOOL from 'id1.asn' (module 'NCBI-ID1Access')
  • Code generated by DATATOOL from 'id2.asn' (module 'NCBI-ID2Access')
  • Code generated by DATATOOL from 'insdseq.asn' (module 'INSD-INSDSeq')
  • Code generated by DATATOOL from 'medlars.asn' (module 'NCBI-Medlars')
  • Code generated by DATATOOL from 'medline.asn' (module 'NCBI-Medline')
  • Code generated by DATATOOL from 'mim.asn' (module 'NCBI-Mim')
  • Code generated by DATATOOL from 'mla.asn' (module 'NCBI-MedArchive')
  • Code generated by DATATOOL from 'mmdb1.asn' (module 'MMDB')
  • Code generated by DATATOOL from 'mmdb1.asn' (module 'MMDB-Chemical-graph')
  • Code generated by DATATOOL from 'mmdb2.asn' (module 'MMDB-Structural-model')
  • Code generated by DATATOOL from 'mmdb3.asn' (module 'MMDB-Features')
  • Code generated by DATATOOL from 'ncbimime.asn' (module 'NCBI-Mime')
  • Code generated by DATATOOL from 'objprt.asn' (module 'NCBI-ObjPrt')
  • Code generated by DATATOOL from 'omssa.asn' (module 'OMSSA')
  • Code generated by DATATOOL from 'pcassay.asn' (module 'NCBI-PCAssay')
  • Code generated by DATATOOL from 'pcsubstance.asn' (module 'NCBI-PCSubstance')
  • Code generated by DATATOOL from 'proj.asn' (module 'NCBI-Project')
  • Code generated by DATATOOL from 'pub.asn' (module 'NCBI-Pub')
  • Code generated by DATATOOL from 'pubmed.asn' (module 'NCBI-PubMed')
  • Code generated by DATATOOL from 'remap.asn' (module 'NCBI-Remap')
  • Code generated by DATATOOL from 'scoremat.asn' (module 'NCBI-ScoreMat')
  • Code generated by DATATOOL from 'seq.asn' (module 'NCBI-Sequence')
  • Code generated by DATATOOL from 'seqalign.asn' (module 'NCBI-Seqalign')
  • Code generated by DATATOOL from 'seqblock.asn' (module 'EMBL-General')
  • Code generated by DATATOOL from 'seqblock.asn' (module 'GenBank-General')
  • Code generated by DATATOOL from 'seqblock.asn' (module 'PDB-General')
  • Code generated by DATATOOL from 'seqblock.asn' (module 'PIR-General')
  • Code generated by DATATOOL from 'seqblock.asn' (module 'PRF-General')
  • Code generated by DATATOOL from 'seqblock.asn' (module 'SP-General')
  • Code generated by DATATOOL from 'seqcode.asn' (module 'NCBI-SeqCode')
  • Code generated by DATATOOL from 'seqedit.asn' (module 'NCBI-SeqEdit')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-BioSource')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-Gene')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-Organism')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-Protein')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-RNA')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-Rsite')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-Seqfeat')
  • Code generated by DATATOOL from 'seqfeat.asn' (module 'NCBI-TxInit')
  • Code generated by DATATOOL from 'seqloc.asn' (module 'NCBI-Seqloc')
  • Code generated by DATATOOL from 'seqres.asn' (module 'NCBI-Seqres')
  • Code generated by DATATOOL from 'seqset.asn' (module 'NCBI-Seqset')
  • Code generated by DATATOOL from 'seqsplit.asn' (module 'NCBI-Seq-split')
  • Code generated by DATATOOL from 'seqtable.asn' (module 'NCBI-SeqTable')
  • Code generated by DATATOOL from 'seqtest.asn' (module 'NCBI-SeqTest')
  • Code generated by DATATOOL from 'submit.asn' (module 'NCBI-Submit')
  • Code generated by DATATOOL from 'taxon1.asn' (module 'NCBI-Taxon1')
  • Code generated by DATATOOL from 'tinyseq.asn' (module 'NCBI-TSeq')
  • Code generated by DATATOOL from 'valerr.asn' (module 'NCBI-ValErrors')
  • Code generated by DATATOOL from 'egquery.dtd' (module 'egquery')
  • Code generated by DATATOOL from 'ehistory.dtd' (module 'ehistory')
  • Code generated by DATATOOL from 'einfo.dtd' (module 'einfo')
  • Code generated by DATATOOL from 'elink.dtd' (module 'elink')
  • Code generated by DATATOOL from 'epost.dtd' (module 'epost')
  • Code generated by DATATOOL from 'esearch.dtd' (module 'esearch')
  • Code generated by DATATOOL from 'espell.dtd' (module 'espell')
  • Code generated by DATATOOL from 'esummary.dtd' (module 'esummary')
  • Code generated by DATATOOL from 'linkout.dtd' (module 'linkout')
  • Code generated by DATATOOL from 'uilist.dtd' (module 'uilist')
• LibTDS API
  • Charset conversion
  • Authentication
  • Configuration
  • Conversion
  • Memory allocation
  • Query
  • Network functions
  • Dynamic string functions
  • Results processing
• BitMagic C++ Library
  • The Main bvector<> Group
  • Set algorithms
    • Distance metrics
  • Memory Allocation
  • GAP functions
  • BIT functions
  • bvector serialization
  • Processor specific optimizations for SSE2 instructions
  • Small sets functionality
• db-lib API
  • db-lib internals
  • db-lib bulk copy functions.
    • Internal bcp functions
  • Primary functions
  • Remote Procedure functions
  • Money functions
  • Datetime functions
  • Unimplemented
• ODBC API
  • ODBC utility
• Tests
• GUI_WIDGETS_GL
• EUtils
• ResourcePool
• Compression
• CompressionStreams
• WinHook

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