Here is a list of all file members with links to the files they belong to:

- u -

• u_threshold : miscmath.c
• UCD_BLOCK_SIZE : pcre_internal.h
• UCD_CATEGORY : pcre_internal.h
• UCD_CHARTYPE : pcre_internal.h
• UCD_OTHERCASE : pcre_internal.h
• UCD_SCRIPT : pcre_internal.h
• uch : zutil.h, table_listctrl.cpp
• uchar : unzcrash.c
• UChar : bzlib_private.h, bzip2recover.c, bzip2.c
• Uchar : ncbitype.h
• UCHAR : sqltypes.h
• uchf : zutil.h
• ucp_Arabic : ucp.h
• ucp_Armenian : ucp.h
• ucp_Balinese : ucp.h
• ucp_Bengali : ucp.h
• ucp_Bopomofo : ucp.h
• ucp_Braille : ucp.h
• ucp_Buginese : ucp.h
• ucp_Buhid : ucp.h
• ucp_C : ucp.h
• ucp_Canadian_Aboriginal : ucp.h
• ucp_Carian : ucp.h
• ucp_Cc : ucp.h
• ucp_Cf : ucp.h
• ucp_Cham : ucp.h
• ucp_Cherokee : ucp.h
• ucp_Cn : ucp.h
• ucp_Co : ucp.h
• ucp_Common : ucp.h
• ucp_Coptic : ucp.h
• ucp_Cs : ucp.h
• ucp_Cuneiform : ucp.h
• ucp_Cypriot : ucp.h
• ucp_Cyrillic : ucp.h
• ucp_Deseret : ucp.h
• ucp_Devanagari : ucp.h
• ucp_Ethiopic : ucp.h
• ucp_Georgian : ucp.h
• ucp_Glagolitic : ucp.h
• ucp_Gothic : ucp.h
• ucp_Greek : ucp.h
• ucp_Gujarati : ucp.h
• ucp_Gurmukhi : ucp.h
• ucp_Han : ucp.h
• ucp_Hangul : ucp.h
• ucp_Hanunoo : ucp.h
• ucp_Hebrew : ucp.h
• ucp_Hiragana : ucp.h
• ucp_Inherited : ucp.h
• ucp_Kannada : ucp.h
• ucp_Katakana : ucp.h
• ucp_Kayah_Li : ucp.h
• ucp_Kharoshthi : ucp.h
• ucp_Khmer : ucp.h
• ucp_L : ucp.h
• ucp_Lao : ucp.h
• ucp_Latin : ucp.h
• ucp_Lepcha : ucp.h
• ucp_Limbu : ucp.h
• ucp_Linear_B : ucp.h
• ucp_Ll : ucp.h
• ucp_Lm : ucp.h
• ucp_Lo : ucp.h
• ucp_Lt : ucp.h
• ucp_Lu : ucp.h
• ucp_Lycian : ucp.h
• ucp_Lydian : ucp.h
• ucp_M : ucp.h
• ucp_Malayalam : ucp.h
• ucp_Mc : ucp.h
• ucp_Me : ucp.h
• ucp_Mn : ucp.h
• ucp_Mongolian : ucp.h
• ucp_Myanmar : ucp.h
• ucp_N : ucp.h
• ucp_Nd : ucp.h
• ucp_New_Tai_Lue : ucp.h
• ucp_Nko : ucp.h
• ucp_Nl : ucp.h
• ucp_No : ucp.h
• ucp_Ogham : ucp.h
• ucp_Ol_Chiki : ucp.h
• ucp_Old_Italic : ucp.h
• ucp_Old_Persian : ucp.h
• ucp_Oriya : ucp.h
• ucp_Osmanya : ucp.h
• ucp_P : ucp.h
• ucp_Pc : ucp.h
• ucp_Pd : ucp.h
• ucp_Pe : ucp.h
• ucp_Pf : ucp.h
• ucp_Phags_Pa : ucp.h
• ucp_Phoenician : ucp.h
• ucp_Pi : ucp.h
• ucp_Po : ucp.h
• ucp_Ps : ucp.h
• ucp_Rejang : ucp.h
• ucp_Runic : ucp.h
• ucp_S : ucp.h
• ucp_Saurashtra : ucp.h
• ucp_Sc : ucp.h
• ucp_Shavian : ucp.h
• ucp_Sinhala : ucp.h
• ucp_Sk : ucp.h
• ucp_Sm : ucp.h
• ucp_So : ucp.h
• ucp_Sundanese : ucp.h
• ucp_Syloti_Nagri : ucp.h
• ucp_Syriac : ucp.h
• ucp_Tagalog : ucp.h
• ucp_Tagbanwa : ucp.h
• ucp_Tai_Le : ucp.h
• ucp_Tamil : ucp.h
• ucp_Telugu : ucp.h
• ucp_Thaana : ucp.h
• ucp_Thai : ucp.h
• ucp_Tibetan : ucp.h
• ucp_Tifinagh : ucp.h
• ucp_Ugaritic : ucp.h
• ucp_Vai : ucp.h
• ucp_Yi : ucp.h
• ucp_Z : ucp.h
• ucp_Zl : ucp.h
• ucp_Zp : ucp.h
• ucp_Zs : ucp.h
• UCS2LE_ASCII : tdsiconv.h
• UCS2LE_Latin1 : tdsiconv.h
• UCS2LE_UTF8 : tdsiconv.h
• ucs2name : iconv.c
• UDWORD : sqltypes.h
• uilist_RegisterModuleClasses() : uilist_module.cpp
• uInt : zconf.h
• UINT : sqltypes.h
• Uint1 : ncbitype.h
• UInt16 : bzlib_private.h, bzip2.c
• Uint2 : ncbitype.h
• UInt32 : bzlib_private.h, bzip2recover.c, bzip2.c
• Uint4 : ncbitype.h
• UINT4_MAX : ncbi_std.h
• uInt64_from_UInt32s() : bzip2.c
• uInt64_isZero() : bzip2.c
• uInt64_qrm10() : bzip2.c
• uInt64_to_double() : bzip2.c
• uInt64_toAscii() : bzip2.c
• Uint8 : ncbitype.h
• Uint8ToString_DataSize() : makeblastdb.cpp
• uIntf : zconf.h
• uintptr_t : ncbitype.h
• UIVAL : odbc.c
• ulg : zutil.h
• uLong : zconf.h
• ULONG : sqltypes.h
• uLongf : zconf.h
• ULVAL : odbc.c
• UNALIGNED_BH : blocksort.c
• unchecked_xpm : table_listctrl.cpp
• uncompress() : uncompr.c, bzip2.c, zlib.h
• UNCOMPRESSED : dbindex.hpp
• uncompressStream() : bzip2.c
• Ungetline() : gnomon_model.cpp
• UngetNonWhiteSpace() : test.cpp
• UnicodeToAscii() : unicode.cpp, unicode.hpp
• UnicodeToUTF8() : unicode.cpp, unicode.hpp
• uninf_names : cleanup_feat.cpp
• uniq() : chainer.cpp
• UNIQUE_ACTIVITY_ON_PROT : sequence_macros.hpp
• UNIQUE_ACTIVITY_ON_PROTREF : sequence_macros.hpp
• UNIQUE_CHAR_IN_STRING : sequence_macros.hpp
• UNIQUE_CODEBREAK_ON_CDREGION : sequence_macros.hpp
• UNIQUE_DBXREF_ON_FEATURE : sequence_macros.hpp
• UNIQUE_DBXREF_ON_GENE : sequence_macros.hpp
• UNIQUE_DBXREF_ON_GENEREF : sequence_macros.hpp
• UNIQUE_DBXREF_ON_ORGREF : sequence_macros.hpp
• UNIQUE_DBXREF_ON_PROT : sequence_macros.hpp
• UNIQUE_DBXREF_ON_PROTREF : sequence_macros.hpp
• UNIQUE_DBXREF_ON_SEQFEAT : sequence_macros.hpp
• UNIQUE_ECNUMBER_ON_PROT : sequence_macros.hpp
• UNIQUE_ECNUMBER_ON_PROTREF : sequence_macros.hpp
• UNIQUE_EXTRAACCN_ON_EMBLBLOCK : sequence_macros.hpp
• UNIQUE_EXTRAACCN_ON_GENBANKBLOCK : sequence_macros.hpp
• UNIQUE_GBQUAL_ON_FEATURE : sequence_macros.hpp
• UNIQUE_GBQUAL_ON_SEQFEAT : sequence_macros.hpp
• UNIQUE_KEYWORD_ON_EMBLBLOCK : sequence_macros.hpp
• UNIQUE_KEYWORD_ON_GENBANKBLOCK : sequence_macros.hpp
• UNIQUE_NAME_ON_PROT : sequence_macros.hpp
• UNIQUE_NAME_ON_PROTREF : sequence_macros.hpp
• UNIQUE_ORGMOD_ON_BIOSOURCE : sequence_macros.hpp
• UNIQUE_ORGMOD_ON_ORGNAME : sequence_macros.hpp
• UNIQUE_ORGMOD_ON_ORGREF : sequence_macros.hpp
• UNIQUE_QUAL_ON_RNAGEN : sequence_macros.hpp
• UNIQUE_QUAL_ON_RNAQSET : sequence_macros.hpp
• UNIQUE_SEQFEATXREF_ON_FEATURE : sequence_macros.hpp
• UNIQUE_SEQFEATXREF_ON_SEQFEAT : sequence_macros.hpp
• UNIQUE_SEQID_ON_BIOSEQ : sequence_macros.hpp
• UNIQUE_STRING_IN_LIST : sequence_macros.hpp
• UNIQUE_STRING_IN_VECTOR : sequence_macros.hpp
• UNIQUE_SUBSOURCE_ON_BIOSOURCE : sequence_macros.hpp
• UNIQUE_SYNONYM_ON_GENE : sequence_macros.hpp
• UNIQUE_SYNONYM_ON_GENEREF : sequence_macros.hpp
• UniqueAA : MSMod.hpp
• unitZ : opengl_renderer.cpp
• UNIX_REG_SECTION : msvc_prj_defines.hpp
• unix_to_nt_time() : token.c
• UNIXODBC : config.h
• UNKNOWN_HYDROPHOBICITY : style_manager.hpp, style_manager.cpp
• UNLOAD_PRJ_DLG_DESCR : project_task.cpp
• UnpackDPResult() : cn3d_ba_interface.cpp
• UnpackSeqEntry() : sequence_set.cpp, su_sequence_set.cpp
• UnpackSeqSet() : sequence_set.cpp, su_sequence_set.cpp
• UnpackUserObject() : uoconv.cpp, uoconv.hpp
• unput : lex.newick.cpp
• unRLE_obuf_to_output_FAST() : bzlib.c
• unRLE_obuf_to_output_SMALL() : bzlib.c
• UnsetDiagPostFlag() : ncbidiag.cpp, ncbidiag.hpp
• UnsetDiagTraceFlag() : ncbidiag.cpp, ncbidiag.hpp
• UnsignedInt() : asniotest.cpp
• unwanted_words : autodef_feature_clause_base.cpp
• unzFailsExist : bzip2.c
• unzSuffix : bzip2.c
• UODBCINT64 : sqltypes.h
• UP : fastme.h
• up_xpm : table_listctrl.cpp
• Upcase() : ncbistre.hpp
• UPDATE : inflate.c
• update_children_default_ns() : node_manip.cpp
• UPDATE_HASH : deflate.c
• updateAveragesMatrix() : bNNI.cpp
• updateComparisonFunction : update_viewer.cpp
• updatePair() : bNNI.cpp, bme.cpp
• updateSizes() : graph.cpp, gme.cpp
• updateSubTree() : bme.cpp
• updateSubTreeAfterNNI() : bNNI.cpp
• updateSubTreeAverages() : gme.cpp
• updatewindow() : inflate.c
• UPHEAP : huffman.c
• UppermostCast() : ncbiexpt.hpp
• UpstreamStartOrSplice() : gnomon_seq.cpp
• URL_Connect() : ncbi_connutil.c, ncbi_connutil.h
• URL_ConnectEx() : ncbi_connutil.c, ncbi_connutil.h
• URL_Decode() : ncbi_connutil.c, ncbi_connutil.h
• URL_DecodeEx() : ncbi_connutil.c, ncbi_connutil.h
• URL_DecodeInPlace() : cgi_util.cpp, cgi_util.hpp
• URL_DecodeString() : cgi_util.cpp, cgi_util.hpp
• URL_Encode() : ncbi_connutil.c, ncbi_connutil.h
• URL_EncodeString() : cgi_util.cpp, cgi_util.hpp
• usage : pcretest.c, pcregrep.c, dlltest.c, bzip2.c, agp_renumber.cpp
• Uscale : rgba_color.cpp
• uschar : pcre_internal.h
• USE_COMPLEX_MASK : ncbiobj.cpp
• USE_HEAPOBJ_LIST : ncbiobj.cpp
• USE_LOCAL_PCRE : ncbiconf_xcode_site.h
• USE_MY_GLU_QUADS : opengl_renderer.cpp
• use_utf8 : pcretest.c
• UseDefaultMarginWidth() : wx_utils.cpp, wx_utils.hpp
• USER : fastme_common.h
• USER_COL_NAMES : snp_table_col_names.hpp
• USER_UNICHAR_TYPE : tds.h
• USER_UNIVARCHAR_TYPE : tds.h
• userDir : structure_window.cpp
• USERFIELD_CHOICE_Chs : sequence_macros.hpp
• USERFIELD_CHOICE_IS : sequence_macros.hpp
• USERFIELD_CHOICE_Test : sequence_macros.hpp
• USERFIELD_ON_USEROBJECT_Get : sequence_macros.hpp
• USERFIELD_ON_USEROBJECT_Set : sequence_macros.hpp
• USERFIELD_ON_USEROBJECT_Test : sequence_macros.hpp
• USERFIELD_ON_USEROBJECT_Type : sequence_macros.hpp
• USEROBJECT_HAS_USERFIELD : sequence_macros.hpp
• ush : zutil.h
• ushf : zutil.h
• USHORT : sqltypes.h, sybdb.h
• USING_NCBI_SCOPE : parser.cpp, sub_image.cpp, image_info.cpp, conv_image.cpp, cache_demo.cpp, bm_sparse_sample.cpp, basic_sample_lib_test.cpp, unit_test_sample.cpp, unit_test_alt_sample.cpp, soap_server_sample.cpp, soap_client_sample.cpp, remote_app_client_sample.cpp, ra_dispatcher_client_sample.cpp, netschedule_node_sample.cpp, netschedule_client_sample.cpp, grid_worker_sample.cpp, grid_client_sample.cpp, grid_cgi_sample.cpp, netcache_client_sample3.cpp, netcache_client_sample2.cpp, netcache_client_sample1.cpp, eutils_sample.cpp, dbapi_sample.cpp, helloapp.cpp, remote_blast_demo.cpp, blast_sample.cpp, blast_demo.cpp, basic_sample.cpp, unit_test_validator.cpp, unit_test_idmapper.cpp, acc_pattern.cpp, lds_unit_test.cpp, rmt_dataloader_test.cpp, local_dataloader_test.cpp, cav_main.cpp, cav_function.cpp, blast_services_test.cpp, writedb_unit_test.cpp, gene_info_writer_test.cpp, gene_info_test.cpp, gene_info_reader_app.cpp, seq_writer_unit_test.cpp, asniotest.cpp, showalign_unit_test.cpp, aln_printer.cpp, unit_test_seq_translator.cpp, create_defline.cpp, seqalign_unit_test.cpp, seq_id_unit_test.cpp, mapper_unit_test.cpp, ecnum_unit_test.cpp, entrez2client.cpp, cgi_redirect.cpp, demo_html_template.cpp, demo_html.cpp, broadcast_dialog.cpp, make_score_method.cpp, demo_tablectrl_frame.cpp, w_gl_demo.cpp, tt_demo.cpp, tex_demo.cpp, system_test.cpp, spline_demo.cpp, gl3d_demo.cpp, font_demo.cpp, test_client.hpp, test_client.cpp, test_app_job.cpp, test_snp_filters.cpp, demo_font.cpp, blobrws.cpp, blobrwd.cpp, blobwriter.cpp, blobstore.cpp, blobreader.cpp, lang_query.cpp, dbapi_testspeed.hpp, dbapi_testspeed.cpp, dbapi_send_data.hpp, dbapi_send_data.cpp, dbapi_query.cpp, dbapi_driver_check.cpp, dbapi_cursor.hpp, dbapi_cursor.cpp, dbapi_conn_policy.cpp, dbapi_bcp.hpp, dbapi_bcp.cpp, odbc_sp_who.cpp, odbc_lang.cpp, mysql_lang.cpp, dbl_sp_who.cpp, dbl_lang.cpp, ctl_sp_who.cpp, ctl_lang.cpp, dbapi.cpp, dbapi_cache_admin.cpp, test_bdb_vmerge.cpp, test_bdb_split.cpp, bdb_dumper.cpp, demo4.cpp, demo3.cpp, demo2.cpp, demo1.cpp, bdb_cverify.cpp, bdb_query_parser_main.cpp, ctools.cpp, ncbi_pipe_connector.cpp, ncbi_namedpipe_connector.cpp, cgidemo.cpp, proj_builder_app.cpp, main.cpp, streamtest.cpp, splign_app.cpp, speedtest.cpp, segmasker.cpp, tbl.hpp, split_loader_demo.cpp, objmgr_demo.cpp, objextract.cpp, nwa.cpp, nmer_repeats.cpp, netscheduled.cpp, netcached.cpp, multireader.cpp, idmapper.cpp, id2_fetch_simple.cpp, id1_fetch_simple.cpp, id1_fetch.cpp, save_to_nc.cpp, netschedule_control.cpp, netschedule_check.cpp, netcache_control.cpp, netcache_check.cpp, ncfetch.cpp, remote_cgi_wn.cpp, remote_app_wn.cpp, remote_app_dispatcher.cpp, ns_submit_remote_job.cpp, ns_remote_job_control.cpp, cgi_tunnel2grid.cpp, cgi2rcgi.cpp, formatguess.cpp, main.cpp, convert_seq.cpp, viewer_window_base.cpp, viewer_base.cpp, update_viewer_window.cpp, update_viewer.cpp, taxonomy_tree.cpp, style_manager.cpp, style_dialog.cpp, structure_window.cpp, structure_set.cpp, structure_base.cpp, show_hide_manager.cpp, show_hide_dialog.cpp, sequence_viewer_window.cpp, sequence_viewer_widget.cpp, sequence_viewer.cpp, sequence_set.cpp, sequence_display.cpp, residue.cpp, progress_meter.cpp, preferences_dialog.cpp, periodic_table.cpp, opengl_renderer.cpp, object_3d.cpp, nowin_main.cpp, multitext_dialog.cpp, molecule_identifier.cpp, molecule.cpp, messenger.cpp, data_manager.cpp, coord_set.cpp, conservation_colorer.cpp, command_processor.cpp, cn3d_tools.cpp, cn3d_threader.cpp, cn3d_pssm.cpp, cn3d_png.cpp, cn3d_glcanvas.cpp, cn3d_colors.cpp, cn3d_cache.cpp, cn3d_blast.cpp, cn3d_ba_interface.cpp, cn3d_app.cpp, chemical_graph.cpp, cdd_splash_dialog.cpp, cdd_ref_dialog.cpp, cdd_book_ref_dialog.cpp, cdd_annot_dialog.cpp, bond.cpp, block_multiple_alignment.cpp, atom_set.cpp, annotate_dialog.cpp, animation_controls.cpp, alignment_set.cpp, alignment_manager.cpp, hitmatrix_unit_test.cpp, guide_tree_calc.hpp, guide_tree_calc.cpp, guide_tree_app.cpp, guide_tree.hpp, guide_tree.cpp, cgi_hit_matrix.cpp, masked_range_set.hpp, masked_range_set.cpp, makeblastdb.cpp, convert2blastmask.cpp, blastdbcmd.cpp, blastdbcheck.cpp, blastdb_aliastool.cpp, tblastx_app.cpp, tblastn_app.cpp, rpstblastn_app.cpp, rpsblast_app.cpp, psiblast_app.cpp, blastx_app.cpp, blastp_app.cpp, blastn_app.cpp, blast_formatter.cpp, bdb_env_keeper.cpp, asn_cleanup.cpp, asn2flat.cpp, asn2fasta.cpp, test.cpp, asn2asn.hpp, asn2asn.cpp, annotwriter.cpp, agpconvert.cpp, agp_validate.cpp, agp_renumber.cpp, main.cpp, su_sequence_set.cpp, su_pssm.cpp, su_block_multiple_alignment.cpp, su_alignment_set.cpp, struct_util.cpp, struct_util_demo.cpp, struct_dp_demo.cpp, block_align.cpp, RefinerTrial.cpp, RefinerPhase.cpp, ColumnScorer.cpp, BMAUtils.cpp, bma_refiner.hpp, bma_refiner.cpp, BlockEditor.cpp, BlockBoundaryAlgorithm.cpp, AlignRefineScorer.cpp, unit_test_gene_model.cpp, xcompareannotsdemo.cpp, regexplocdemo.cpp, demo_gene_model.cpp, cpgdemo.cpp, omssamerge.cpp, omssacl.cpp, omssaapp.cpp, omssa.cpp, mspeak.cpp, msms.cpp, msladder.cpp, readresult.cpp, options_unit_test.cpp, kmer_unit_test.cpp, cobalt_unit_test.hpp, cobalt_unit_test.cpp, clusterer_unit_test.cpp, kmercounts.cpp, cobalt_app.cpp, clusterer.cpp, seqdb_unit_test.cpp, bdbloader_unit_test.cpp, seqalignfilter_unit_test.cpp, test_objmgr.hpp, subj_ranges_unit_test.cpp, phiblast_unit_test.cpp, hspstream_test_util.hpp, gencode_singleton_unit_test.cpp, blastoptions_unit_test.cpp, blast_unit_test.cpp, bl2seq_unit_test.cpp, data4xmlformat.cpp, blast_format.cpp, srsearch_app.cpp, main.cpp, mkindex_app.cpp, main.cpp, blastinput_unit_test.cpp, blast_scope_src_unit_test.cpp, blastinput_demo.cpp, seqsrc_seqdb.cpp, score_builder_unit_test.cpp, hitfilter_app.cpp, compart.cpp, prosplign_demo.cpp, cuCdReadWriteASN.hpp, RowSelector.hpp, RefinerDefs.hpp, BMAUtils.hpp, BlockBoundaryAlgorithm.hpp, scopes.hpp, ncbistl.hpp
• USING_OLIGOFAR_SCOPE : scopes.hpp
• USING_OLIGOFAR_SCOPES : scopes.hpp
• USING_OMSSA_SCOPE : omssascore.hpp
• USING_SCOPE : soap_server_sample.cpp, soap_client_sample.cpp, objects_sample.cpp, eutils_sample.cpp, remote_blast_demo.cpp, blast_sample.cpp, blast_demo.cpp, asn_sample.cpp, alnmgr_sample.cpp, agp_write.cpp, validerror_bioseq.cpp, validerror_align.cpp, validator.cpp, unit_test_validator.cpp, mask_writer_seqloc.cpp, mask_writer_fasta.cpp, mask_writer_blastdb_maskinfo.cpp, mask_writer.cpp, mask_fasta_reader.cpp, mask_bdb_reader.cpp, unit_test_idmapper.cpp, idmapper_database.cpp, idmapper_config.cpp, idmapper_builtin.cpp, idmapper.cpp, glimmer_reader.cpp, aln_reader.cpp, agp_read.cpp, reference_item.cpp, primary_item.cpp, locus_item.cpp, gff3_formatter.cpp, gather_items.cpp, flat_seqloc.cpp, flat_file_generator.cpp, feature_item.cpp, ctrl_items.cpp, context.cpp, promote.cpp, autodef_demo.cpp, trace_chgr.cpp, loaderpatcher.cpp, lds_unit_test.cpp, lds_dataloader.cpp, gbloader.cpp, cdd.cpp, bdbloader_rmt.cpp, bdbloader.cpp, cav_seqset.cpp, cav_function.cpp, cav_alignset.cpp, writedb_volume.hpp, writedb_volume.cpp, writedb_isam.hpp, writedb_isam.cpp, writedb_impl.hpp, writedb_impl.cpp, writedb_gimask.hpp, writedb_gimask.cpp, writedb_general.hpp, writedb_general.cpp, writedb_files.hpp, writedb_files.cpp, writedb_convert.hpp, writedb_convert.cpp, writedb_column.hpp, writedb_column.cpp, writedb_unit_test.cpp, taxid_set.cpp, multisource_util.cpp, mask_info_registry.hpp, mask_info_registry.cpp, build_db.cpp, seqdbvolset.hpp, seqdbvol.hpp, seqdbtax.hpp, seqdbobj.cpp, seqdbisam.hpp, seqdbisam.cpp, seqdbgimask.hpp, seqdbfilter.hpp, seqdbcol.hpp, seqdbbitset.hpp, seq_writer.cpp, blastdb_formatter.cpp, blastdb_dataextract.cpp, asniotest.cpp, sparse_ci.cpp, sparse_aln.cpp, pairwise_aln.cpp, alnvwrapp.cpp, alnmrg.cpp, alnvecprint.cpp, alnvec_iterator.cpp, alnmapprint.cpp, aln_serial.cpp, aln_seqid.cpp, aln_generators.cpp, aln_converters.cpp, aln_builders.cpp, vectorscreen.cpp, showalign_unit_test.cpp, tabular.cpp, showdefline.cpp, showalign.cpp, seqalignfilter.cpp, aln_printer.cpp, align_format_util.cpp, alngraphic.cpp, unit_test_seq_translator.cpp, feature.cpp, create_defline.cpp, gb_release_file.cpp, seqalign_unit_test.cpp, seq_id_unit_test.cpp, mapper_unit_test.cpp, ecnum_unit_test.cpp, seqlocinfo.cpp, entrez2client.cpp, winmain.cpp, min_panel_container.cpp, dock_manager.cpp, dock_container.cpp, demo_wx_tree.cpp, demo_wx_empty_app.cpp, demo_tablectrl_frame.cpp, demo_combo_app.cpp, tax_tree_ds.cpp, tax_tree.cpp, test_taxtree.cpp, taxtree_testdlg.cpp, text_sel_handler.cpp, seq_tick_graph.cpp, seq_text_widget.cpp, seq_text_panel.cpp, seq_text_pane_conf.cpp, seq_text_pane.cpp, seq_text_job.cpp, seq_text_font_list.cpp, seq_text_feature_list.cpp, seq_text_ds.cpp, seq_text_display_choice_list.cpp, seq_graph.cpp, seq_text_demo_ui.hpp, seq_text_demo_ui.cpp, seq_text_demo_dlg.hpp, seq_text_demo_dlg.cpp, wx_track_settings_dlg.cpp, wx_annot_config_dlg.cpp, vis_range_glyph.cpp, switch_point_glyph.cpp, sparsealn_graphic_ds.cpp, six_frames_trans_track.cpp, sequence_track.cpp, seqgraphic_widget.cpp, seqgraphic_utils.cpp, seqgraphic_render.cpp, seqgraphic_pane.cpp, seqgraphic_job.cpp, seqgraphic_genbank_ds.cpp, seqgraphic_conf.cpp, seqgraphic_alignment_ds.cpp, seq_map_glyph.cpp, segment_map_track.cpp, pane_content_conf.cpp, mate_pair_glyph.cpp, histogram_glyph.cpp, histogram_conf.cpp, graph_track.cpp, graph_glyph.cpp, gene_model_track.cpp, gene_model_group.cpp, gene_model_config.cpp, feature_track.cpp, feature_panel_ds.cpp, feature_panel.cpp, feature_glyph.cpp, external_layout_track.cpp, epigenomics_track.cpp, seqgraphic_demo_dlg.hpp, seqgraphic_demo_dlg.cpp, config_utils.cpp, comment_glyph.cpp, clone_placement_glyph.cpp, seqtest.cpp, cds_glyph.cpp, annot_conf.cpp, alnvec_graphic_ds.cpp, all_other_features_track.cpp, alignment_track.cpp, alignment_smear_glyph.cpp, alignment_job.cpp, alignment_glyph.cpp, xml_retrieve_job.cpp, text_retrieve_job.cpp, text_panel.cpp, text_fasta_ds.cpp, text_fasta.cpp, text_ds.cpp, flat_file_text_item.cpp, flat_file_seqblock_collapsed.cpp, flat_file_retrieve_job.cpp, flat_file_feature_collapsed.cpp, flat_feature_retrieve_job.cpp, feature_types_dlg.cpp, feature_create_dlg.cpp, feature_check_panel.cpp, fasta_title_item.cpp, fasta_seqhdr_item.cpp, fasta_seqblock_item.cpp, fasta_retrieve_job.cpp, flat_file_demo_dlg.hpp, featureselect_demo_app.cpp, asn_retrieve_job.cpp, phylo_tree_reader.cpp, phylo_tree_cgi.cpp, object_text.cpp, object_list_widget.cpp, object_list.cpp, demo_feat_table_frame.cpp, std_seg_hit.cpp, seq_graph.cpp, hit_matrix_widget.cpp, hit_matrix_renderer.cpp, hit_matrix_pane.cpp, hit_matrix_graph.cpp, hit_matrix_ds_builder.cpp, hit_clustering.cpp, diag_hit.cpp, density_map_ds.cpp, dense_hit.cpp, dense_ds.cpp, hit_matrix_demo_dlg.hpp, hit_matrix_demo_dlg.cpp, align_seq_table.cpp, feat_table_ds.cpp, feat_table.cpp, locationl_list_ctrl.cpp, location_panel.cpp, generic_props_panel.cpp, edit_object_dlg.hpp, edit_object_dlg.cpp, select_feature_dlg.hpp, cds_product_panel.cpp, sparse_iterator.cpp, sparse_functions.cpp, sparse_alignment.cpp, align_ds.cpp, feat_show_panel.cpp, feat_check_browser.cpp, demo_align_table_frame.hpp, demo_align_table_frame.cpp, annot_filter_dlg.cpp, annot_compare_ds.cpp, annot_compare.cpp, alnspan_widget.cpp, alnspan_vertmodel.cpp, aln_table_ds.cpp, aln_table.cpp, trace_graph.cpp, trace_data.cpp, sparse_row_handle.cpp, sparse_multi_ds.cpp, feature_graph.cpp, align_multiple_demo_dlg.hpp, align_multiple_demo_dlg.cpp, aln_multi_cgi.cpp, build_sparse_aln_job.cpp, build_alnvec_job.cpp, alnvec_row_handle.cpp, alnvec_multi_ds.cpp, alnmulti_widget.cpp, alnmulti_model.cpp, alnmulti_ds_builder.cpp, aln_vec_iterator.cpp, align_row_graph_cont.cpp, align_row.cpp, align_mark_handler.cpp, cross_aln_demo_dlg.hpp, cross_aln_demo_dlg.cpp, cross_panel_ir.cpp, cross_aln_render.hpp, cross_aln_ds.cpp, test_msg.cpp, utils.cpp, snp_track.cpp, snp_ds.cpp, widget_snp_table.cpp, view_snp_table.cpp, snp_table_job.cpp, model_snp_table.cpp, factory_snp_table.cpp, gwas_load_job.cpp, analysis_loader.cpp, ld_track.cpp, ld_line.cpp, ld_glyph.cpp, ld_ds.cpp, hapmap_track.cpp, hapmap_ds.cpp, gwas_glyph.cpp, gap_track.cpp, gap_ds.cpp, track_creator_ui.cpp, snp_filter_job.cpp, bins_track.cpp, bins_glyph_types.cpp, bins_glyph.cpp, bins_ds.cpp, edit_job.cpp, autodef_tool_manager.cpp, autodef_params_panel.cpp, autodef_params.cpp, windowmasker_tool.cpp, windowmasker_panel.cpp, wig_load_job.cpp, view_graphic.cpp, view_feattable.cpp, text_view.cpp, sequence_search_tool.cpp, seq_text_view.cpp, resolve_id_dlg.cpp, orf_search_tool.cpp, gff_load_job.cpp, gff_exporter.cpp, gff_export_job.cpp, gb_ui_data_source.cpp, gb_load_option_panel.cpp, flatfile_exporter.cpp, flatfile_export_job.cpp, feature_search_tool.cpp, fasta_load_job.cpp, fasta_exporter.cpp, fasta_export_job.cpp, entrez_search_tool.cpp, cpg_search_tool.cpp, component_search_tool.cpp, cleanup_tool.cpp, bed_load_job.cpp, agp_load_job.cpp, agp_exporter.cpp, agp_export_job.cpp, tree_builder_tool.cpp, splign_tool.cpp, splign_panel.cpp, phy_tree_view.cpp, phy_load_job.cpp, phy_exporter.cpp, phy_export_job.cpp, net_blast_ui_load_manager.cpp, net_blast_ui_data_source.cpp, net_blast_job_descr.cpp, net_blast_dm_search_tool.cpp, multi_align_view.cpp, mp_cross_align_view.cpp, merge_alignments_tool_manager.cpp, merge_alignments_params_panel.cpp, group_alignments_tool_manager.cpp, group_alignments_params_panel.cpp, find_overlap_tool.cpp, dot_matrix_view.cpp, cross_align_view.cpp, create_needleman_wunsch_tool_manager.cpp, create_gene_model_tool_manager.cpp, cleanup_alignments_tool_manager.cpp, blast_tool_manager_base.cpp, blast_seq_tool_manager.cpp, blast_search_tool_manager.cpp, blast_search_task.cpp, blast_search_params.cpp, blast_jobs.cpp, annot_compare_view.cpp, align_span_view.cpp, vis_range_event.cpp, vis_range.cpp, utils.cpp, user_type_extensions.cpp, switch_points.cpp, snp_utils.cpp, sequence.cpp, seqid_dictionary.cpp, seqfetch_queue.cpp, seq_map.cpp, relation.cpp, registry.cpp, reg_file.cpp, pw_alignment.cpp, objtype_converters.cpp, object_index.cpp, obj_event.cpp, obj_convert.cpp, obj_clipboard.cpp, mate_pair.cpp, label.cpp, histogram.cpp, graph.cpp, gi_cache.cpp, fingp_seqloc.cpp, fingp_seqid.cpp, fingp_seqgraph.cpp, fingp_seqfeat.cpp, fingp_seqalign.cpp, feature_delete.cpp, feature_change.cpp, feature.cpp, feat_pack.cpp, feat_label.cpp, entrez_conversion.cpp, entrez_cache.cpp, conv_seq_loc.cpp, comment.cpp, bookmark.cpp, basic_converters.cpp, alignment_smear_layout.cpp, alignment_smear.cpp, alignment.cpp, gui.cpp, workspace_folder.cpp, workspace.cpp, visible_range.cpp, ui_data_source_service.cpp, selection_service.cpp, search_tool_base.cpp, search_form_base.cpp, save_dlg.cpp, project_view_impl.cpp, project_view_factory.cpp, project_view_base_impl.cpp, project_tree_view.cpp, project_tree_panel.cpp, project_task.cpp, project_service.cpp, project_selector_panel.cpp, project_loading_task.cpp, project_item.cpp, project_folder.cpp, project_converters.cpp, project_cmd_handler.cpp, project.cpp, open_view_manager_impl.cpp, obj_edit.cpp, obj_delete.cpp, loading_app_job.cpp, document.cpp, dh_manager.cpp, data_mining_view.cpp, data_mining_panel.cpp, asn_load_job.cpp, app_tasks.cpp, app_explorer_service.cpp, app_explorer_cmd_handler.cpp, algo_tool_manager_base.cpp, settings_set.cpp, sqlite_cache_factory.cpp, gbproject_tool.cpp, ini2reg.cpp, gui.cpp, gbench_version.cpp, feedback_wizard.cpp, aboutdlg.cpp, sample.cpp, pagegen.cpp, win_mask_util.cpp, win_mask_seq_title.cpp, win_mask_sdust_masker.cpp, win_mask_gen_counts.cpp, win_mask_dup_table.cpp, win_mask_config.cpp, win_mask_app.cpp, wig2table.cpp, streamtest.cpp, speedtest.cpp, segmasker.cpp, seg.cpp, read_blast_result.hpp, split_loader_demo.cpp, objmgr_demo.cpp, objextract.cpp, nwa.cpp, nmer_repeats.cpp, multireader.cpp, test_mshdf5.cpp, pkl2hdf5.cpp, MzXmlReader.hpp, MzXmlReader.cpp, mzXML2hdf5.cpp, mshdf2mzXML.cpp, fixMsHdf5.cpp, idmapper.cpp, id2_fetch_simple.cpp, id1_fetch_simple.cpp, id1_fetch.cpp, gi2taxid.cpp, dust_mask_app.cpp, convert_seq.cpp, update_viewer.cpp, taxonomy_tree.cpp, style_manager.cpp, structure_window.cpp, structure_set.cpp, sequence_viewer.cpp, sequence_set.cpp, residue.cpp, preferences_dialog.cpp, opengl_renderer.cpp, object_3d.cpp, nowin_main.cpp, molecule_identifier.cpp, molecule.cpp, messenger.cpp, file_messaging.cpp, data_manager.cpp, coord_set.cpp, command_processor.cpp, cn3d_tools.cpp, cn3d_threader.cpp, cn3d_pssm.cpp, cn3d_glcanvas.cpp, cn3d_cache.cpp, cn3d_blast.cpp, cn3d_ba_interface.cpp, cn3d_app.cpp, chemical_graph.cpp, cdd_splash_dialog.cpp, cdd_ref_dialog.cpp, cdd_book_ref_dialog.cpp, cdd_annot_dialog.cpp, bond.cpp, block_multiple_alignment.cpp, atom_set.cpp, animation_controls.cpp, alignment_set.cpp, alignment_manager.cpp, guide_tree_calc.hpp, guide_tree_calc.cpp, guide_tree.cpp, masked_range_set.hpp, masked_range_set.cpp, makeblastdb.cpp, convert2blastmask.cpp, blastdbcmd.cpp, blastdbcheck.cpp, blastdb_aliastool.cpp, tblastx_app.cpp, tblastn_app.cpp, rpstblastn_app.cpp, rpsblast_app.cpp, psiblast_app.cpp, blastx_app.cpp, blastp_app.cpp, blastn_app.cpp, blast_formatter.cpp, blast_app_util.cpp, asn_cleanup.cpp, asn2flat.cpp, asn2fasta.cpp, annotwriter.cpp, agpconvert.cpp, seq_masker_window_pattern_ambig.cpp, seq_masker_window_pattern.cpp, seq_masker_window_ambig.cpp, seq_masker_window.cpp, seq_masker.cpp, win_mask_app.cpp, su_sequence_set.cpp, su_pssm.cpp, su_block_multiple_alignment.cpp, su_alignment_set.cpp, struct_util.cpp, struct_util_demo.cpp, struct_dp_demo.cpp, block_align.cpp, cuTaxNRCriteria.cpp, cuSimpleB2SWrapper.cpp, cuSeqAnnotFromFasta.cpp, cuReadFastaWrapper.cpp, cuPrefTaxNodes.cpp, cuCdFromFasta.cpp, cuCdCore.cpp, cuCdAnnotation.cpp, RefinerTrial.cpp, RefinerPhase.cpp, ColumnScorer.cpp, bma_refiner.cpp, AlignRefineScorer.cpp, util.cpp, unit_test_gene_model.cpp, signal_seq.cpp, restriction.cpp, regexp_loc.cpp, orf.cpp, masking_delta.cpp, make_cdr_prods.cpp, gene_model.cpp, xcompareannotsdemo.cpp, regexplocdemo.cpp, demo_gene_model.cpp, cpgdemo.cpp, compare_feats.cpp, coiled_coil.cpp, antigenic.cpp, annot_compare.cpp, align_group.cpp, align_cleanup.cpp, xcript_tests.cpp, single_aln_tests.cpp, seqtest.cpp, seq_id_tests.cpp, prot_prod_tests.cpp, demo_seqtest.cpp, blastp_tests.cpp, newick.tab.cpp, lex.newick.cpp, dist_methods.cpp, omssamerge.cpp, omssacl.cpp, omssaapp.cpp, omssa2pepXML.cpp, omssa.cpp, mspeak.cpp, msms.cpp, msladder.cpp, readresult.cpp, update_omssamod.cpp, test_unimod.cpp, MsHdf5.cpp, parse.cpp, id_handler.cpp, hmm_inlines.hpp, hmm.cpp, gnomon_objmgr.cpp, gnomon_model.cpp, local_finder.cpp, asn1.cpp, annot.cpp, options_unit_test.cpp, kmer_unit_test.cpp, cobalt_unit_test.hpp, cobalt_unit_test.cpp, clusterer_unit_test.cpp, traceback.cpp, seqalign.cpp, rps.cpp, kmercounts.cpp, hit.cpp, cobalt_app.cpp, clusterer.cpp, blast.cpp, seqdb_unit_test.cpp, bdbloader_unit_test.cpp, seqalignfilter_unit_test.cpp, test_objmgr.cpp, subj_ranges_unit_test.cpp, seqalign_set_convert.cpp, seqalign_cmp.cpp, phiblast_unit_test.cpp, gencode_singleton_unit_test.cpp, blastoptions_unit_test.cpp, bl2seq_unit_test.cpp, data4xmlformat.cpp, blastxml_format.cpp, blastfmtutil.cpp, blast_format.cpp, srsearch_app.cpp, sr_search_impl.hpp, sr_search.cpp, mkindex_app.cpp, blastinput_unit_test.cpp, blast_scope_src_unit_test.cpp, tblastx_args.cpp, tblastn_args.cpp, rpstblastn_args.cpp, rpsblast_args.cpp, psiblast_args.cpp, blastinput_demo.cpp, cmdline_flags.cpp, blastx_args.cpp, blastp_args.cpp, blastn_args.cpp, blast_scope_src.cpp, blast_input.cpp, blast_fasta_input.cpp, blast_args.cpp, subj_ranges_set.cpp, seqsrc_seqdb.cpp, blast_dbindex.cpp, bioseq_extract_data_priv.cpp, score_builder_unit_test.cpp, score_builder.cpp, hitfilter_app.cpp, blast_tabular.cpp, align_filter.cpp, splign_simple.cpp, splign_formatter.cpp, PSeq.hpp, prosplign.cpp, NSeq.hpp, NSeq.cpp, Info.cpp, compartments.cpp, AliSeqAlign.hpp, nw_formatter.cpp, nw_aligner.cpp, sequence_set.cpp, result_set.cpp, ngalign.cpp, merge_aligner.cpp, blast_aligner.cpp, banded_aligner.cpp, alignment_scorer.cpp, alignment_filterer.cpp, demo_contig_assembly.cpp, contig_assembly.cpp, writedb.hpp, seqdbexpert.hpp, seqdbcommon.hpp, seqdb.hpp, column_reader.hpp, blastdb_dataextract.hpp, seqids_extractor.hpp, seqid_comp.hpp, pairwise_aln.hpp, aln_tests.hpp, aln_serial.hpp, aln_seqid.hpp, aln_container.hpp, aln_asn_reader.hpp, aln_printer.hpp, gb_release_file.hpp, phy_load_params.hpp, cuUtils.hpp, cuTaxTree.hpp, cuTaxNRCriteria.hpp, cuTaxClient.hpp, cuSimpleB2SWrapper.hpp, cuSequenceTable.hpp, cuSequence.hpp, cuSeqTreeStream.hpp, cuSeqTreeSlc.hpp, cuSeqTreeRootedLayout.hpp, cuSeqTreeNj.hpp, cuSeqTreeLayout.hpp, cuSeqTreeFactory.hpp, cuSeqTreeAsnizer.hpp, cuSeqTreeAlg.hpp, cuSeqtree.hpp, cuSeqSwapper.hpp, cuSeqAnnotFromFasta.hpp, cuRowSourceTable.hpp, cuReadFastaWrapper.hpp, cuPssmScorer.hpp, cuPssmMaker.hpp, cuPrefTaxNodes.hpp, cuMFastaReader.hpp, cuHitsDistributor.hpp, cuGlobalDefs.hpp, cuFlexiDm.hpp, cuDmIdentities.hpp, cuDmAlignedscore.hpp, cuDmAlignedOptimalScore.hpp, cuDistmat.hpp, cuConsensusMaker.hpp, cuCdUpdater.hpp, cuCdFromFasta.hpp, cuCdFamily.hpp, cuCdCore.hpp, cuCdAnnotation.hpp, cuBlockIntersector.hpp, cuBlockFormater.hpp, cuBlockExtender.hpp, cuBlock.hpp, cuBlast2Seq.hpp, cuAlignmentCollection.hpp, cuAlignedDM.hpp, cuAlign.hpp, RowSelector.hpp, RefinerDefs.hpp, ColumnScorer.hpp, BMAUtils.hpp, BlockBoundaryAlgorithm.hpp, restriction.hpp, regexp_loc.hpp, loc_mapper.hpp, compare_feats.hpp, id_handler.hpp, gnomon_model.hpp, sr_search.hpp, compartments.hpp, scopes.hpp, ncbistl.hpp
• USIVAL : odbc.c
• USPTR : pcre_internal.h
• UT_Alignment : user_type_ids.hpp
• UT_Alignment_Set : user_type_ids.hpp
• UT_Annotation : user_type_ids.hpp
• UT_Annotation_Alignments : user_type_ids.hpp
• UT_Annotation_Features : user_type_ids.hpp
• UT_Annotation_Graphs : user_type_ids.hpp
• UT_Annotation_Locations : user_type_ids.hpp
• UT_Annotation_SequenceIDs : user_type_ids.hpp
• UT_Annotation_Table : user_type_ids.hpp
• UT_BioTree : user_type_ids.hpp
• UT_DistanceMatrix : user_type_ids.hpp
• UT_EntrezGeneRecord : user_type_ids.hpp
• UT_EntrezRecord : user_type_ids.hpp
• UT_Feature : user_type_ids.hpp
• UT_Feature_CDS : user_type_ids.hpp
• UT_Feature_exon : user_type_ids.hpp
• UT_Feature_gene : user_type_ids.hpp
• UT_Feature_mRNA : user_type_ids.hpp
• UT_Feature_otherRNA : user_type_ids.hpp
• UT_Feature_SNP : user_type_ids.hpp
• UT_Feature_STS : user_type_ids.hpp
• UT_Location : user_type_ids.hpp
• UT_Sequence : user_type_ids.hpp
• UT_Sequence_DNA : user_type_ids.hpp
• UT_Sequence_Protein : user_type_ids.hpp
• UT_Sequence_Set : user_type_ids.hpp
• UT_Sequence_Set_EcoSet : user_type_ids.hpp
• UT_Sequence_Set_EcoSetAln : user_type_ids.hpp
• UT_Sequence_Set_GenProdSet : user_type_ids.hpp
• UT_Sequence_Set_MutSet : user_type_ids.hpp
• UT_Sequence_Set_MutSetAln : user_type_ids.hpp
• UT_Sequence_Set_Nuc_Prot : user_type_ids.hpp
• UT_Sequence_Set_PhySet : user_type_ids.hpp
• UT_Sequence_Set_PhySetAln : user_type_ids.hpp
• UT_Sequence_Set_PopSet : user_type_ids.hpp
• UT_Sequence_Set_PopSetAln : user_type_ids.hpp
• UT_Sequence_Set_Seg_Seq : user_type_ids.hpp
• UT_SequenceID : user_type_ids.hpp
• UT_SequenceID_DNA : user_type_ids.hpp
• UT_SequenceID_Protein : user_type_ids.hpp
• UT_Unknown : user_type_ids.hpp
• UT_ValidationResult : user_type_ids.hpp
• utf16_t : convert.c
• UTF8() : pcrecpp.h
• utf8 : pcregrep.c
• UTF8_ASCII : tdsiconv.h
• UTF8_Latin1 : tdsiconv.h
• UTF8_STRING_MEMBER : choicestr.cpp
• utf8_table3 : pcregrep.c
• utf8_table4 : pcregrep.c
• UTF8_UCS2LE : tdsiconv.h
• UTF8ToAscii() : unicode.cpp, unicode.hpp
• UTF8ToAsciiString() : unicode.cpp, unicode.hpp
• UTF8ToUnicode() : unicode.cpp, unicode.hpp
• UTIL_MatchesMask() : ncbi_util.c, ncbi_util.h
• UTIL_MatchesMaskEx() : ncbi_util.c, ncbi_util.h
• UTIL_NcbiLocalHostName() : ncbi_util.c, ncbi_util.h
• UTIL_PrintableString() : ncbi_util.c, ncbi_util.h
• UTIL_PrintableStringSize() : ncbi_util.c, ncbi_util.h
• UWORD : sqltypes.h

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