src/algo/align/util/demo/compart/compart.cpp File Reference

#include <ncbi_pch.hpp>
#include "compart.hpp"
#include "em.hpp"
#include <algo/align/util/compartment_finder.hpp>
#include <objtools/data_loaders/genbank/gbloader.hpp>
#include <objects/seqloc/Seq_id.hpp>
#include <objmgr/util/seq_loc_util.hpp>
#include <math.h>

Include dependency graph for compart.cpp:

Go to the source code of this file.

Functions
bool	PCompartmentRanker (const CCompartApp::TCompartRef &lhs, const CCompartApp::TCompartRef &rhs)
bool	operator< (const CCompartApp::TCompartRef &lhs, const CCompartApp::TCompartRef &rhs)
ostream &	operator<< (ostream &ostr, const CCompartApp::CCompartment &rhs)
int	main (int argc, const char *argv[])
Variables
END_NCBI_SCOPE	USING_NCBI_SCOPE

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Function Documentation

int main (  int  argc, const char *  argv[] )

Definition at line 634 of file compart.cpp. References eDS_Default.

bool operator< (  const CCompartApp::TCompartRef &  lhs, const CCompartApp::TCompartRef &  rhs )

Definition at line 544 of file compart.cpp.

ostream& operator<< (  ostream &  ostr, const CCompartApp::CCompartment &  rhs )

Definition at line 620 of file compart.cpp. References ITERATE, and CCompartApp::CCompartment::m_HitRefs.

bool PCompartmentRanker (  const CCompartApp::TCompartRef &  lhs, const CCompartApp::TCompartRef &  rhs )

Definition at line 379 of file compart.cpp. Referenced by CCompartApp::x_RankAndStore().

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Variable Documentation

END_NCBI_SCOPE USING_NCBI_SCOPE

Definition at line 632 of file compart.cpp.

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