TMaskedQueryRegions Class Reference
[BLAST (Basic Local Alignment Search Tool)]

Search Toolkit Book for TMaskedQueryRegions

#include <blast_aux.hpp>

List of all members.

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Detailed Description

Collection of masked regions for a single query sequence.

Definition at line 175 of file blast_aux.hpp.

Public Member Functions
TMaskedQueryRegions	RestrictToSeqInt (const objects::CSeq_interval &location) const
	Return a new instance of this object that is restricted to the location specified.
CRef< objects::CPacked_seqint >	ConvertToCPacked_seqint (vector< string > *warnings=NULL) const
	Converts this object to a CPacked_seqint (this is the convention used to encode masking locations in the network BLAST 4 protocol).

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The documentation for this class was generated from the following files:

• include/algo/blast/api/blast_aux.hpp
• src/algo/blast/api/blast_aux.cpp

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