src/algo/blast/api/blast_seqinfosrc_aux.cpp File Reference

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Detailed Description

Implementation of auxiliary functions using IBlastSeqInfoSrc to retrieve ids and related sequence information.

Definition in file blast_seqinfosrc_aux.cpp.

#include <ncbi_pch.hpp>
#include <algo/blast/api/blast_seqinfosrc_aux.hpp>
#include <objects/seqloc/Seq_id.hpp>
#include <serial/typeinfo.hpp>
#include <corelib/ncbiutil.hpp>
#include <algorithm>

Include dependency graph for blast_seqinfosrc_aux.cpp:

Go to the source code of this file.

Functions
	USING_SCOPE (objects)
void	GetSequenceLengthAndId (const blast::IBlastSeqInfoSrc *seqinfo_src, int oid, CRef< CSeq_id > &seqid, TSeqPos *length)
void	GetFilteredRedundantGis (const IBlastSeqInfoSrc &sisrc, int oid, vector< int > &gis)
	Get GIs for a sequence in a redundant database.

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