src/app/blast/blast_formatter.cpp File Reference

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Detailed Description

Stand-alone command line formatter for BLAST.

Definition in file blast_formatter.cpp.

#include <ncbi_pch.hpp>
#include <corelib/ncbiapp.hpp>
#include <serial/iterator.hpp>
#include <algo/blast/api/version.hpp>
#include <algo/blast/api/remote_blast.hpp>
#include <algo/blast/blastinput/blast_input_aux.hpp>
#include <algo/blast/format/blast_format.hpp>
#include "blast_app_util.hpp"

Include dependency graph for blast_formatter.cpp:

Go to the source code of this file.

Classes
class	CBlastFormatterApp
	The application class. More...
Defines
#define	EXIT_CODE__UNKNOWN_RID   1
#define	EXIT_CODE__SEARCH_PENDING   2
#define	EXIT_CODE__SEARCH_FAILED   3
Functions
	USING_SCOPE (blast)
int	main (int argc, const char *argv[])
Variables
static char const	rcsid []
	USING_NCBI_SCOPE

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Define Documentation

#define EXIT_CODE__SEARCH_FAILED   3

Definition at line 277 of file blast_formatter.cpp. Referenced by CBlastFormatterApp::Run().

#define EXIT_CODE__SEARCH_PENDING   2

Definition at line 276 of file blast_formatter.cpp. Referenced by CBlastFormatterApp::Run().

#define EXIT_CODE__UNKNOWN_RID   1

Definition at line 275 of file blast_formatter.cpp. Referenced by CBlastFormatterApp::Run().

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Function Documentation

int main (  int  argc, const char *  argv[] )

Definition at line 328 of file blast_formatter.cpp. References eDS_Default.

USING_SCOPE (  blast   )

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Variable Documentation

char const rcsid[] [static]

Initial value: "$Id: blast_formatter.cpp 167662 2009-08-05 14:04:15Z camacho $" Definition at line 35 of file blast_formatter.cpp.

USING_NCBI_SCOPE

Definition at line 49 of file blast_formatter.cpp.

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