AceView offers a comprehensive annotation of human, mouse and nematode genes
reconstructed by co-alignment and clustering of all publicly available
mRNAs and ESTs on the genome sequence. Our goals are to offer a reliable
up-to-date resource on the genes, their functions, alternative variants,
expression, regulation and interactions, in the hope to stimulate
further validating experiments at the bench
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Homo sapiens gene ZFP82, encoding zinc finger protein 82 homolog (mouse).
TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Compact gene diagram
Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron. Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
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Mouse over the ending of each transcript gives tissues from which the supporting cDNAs were extracted. Details on tissue of origin for each intron and exon is available from the
intron and exons table.
Click on any transcript to open the specific mRNA page, to see the exact cDNA clone support and eventual SNPs and to get details on tissues, sequences, mRNA and protein annotations. Proteins supported by a single continuous cDNA sequence lead to underlining the name/ending of the variant. Names not underlined result from cDNA concatenation in the coding region and should be experimentally checked.
Introns are depicted by broken lines; the height of the top of each intron reflects the relative number of clones supporting this intron.
]^[ A pink broken line denotes an intron with standard boundaries (gt-ag or gc-ag) that is exactly supported (i.e. a cDNA sequence exactly matches the genome over 16 bp, 8 on both sides of the intron).
] ^ ] A blue broken line denotes non-standard introns, exactly supported, but with non-standard at-ac or any other boundaries.
]-[ Pink and
] - ] blue straight lines represent 'fuzzy' introns of the standard and non-standard types respectively, those introns do not follow the 16 bp rule. Black straight lines ]-[denote gaps in the alignments.
Exons: Wide filled pink areas represent putative protein coding regions, narrow empty pink boxes represent the 5'UTR (on the left) and 3' UTR (on the right). Flags identify validated endings: cap site on the 5' side, polyadenylation site on the 3' side. Filled flags correspond to frequent events while empty flags have lesser supporting cDNAs (yet all are validated); at the 3' side, black flags are associated to the main AATAAA signal,
blue flags to any single letter variant of the main . More explanations are given in the
gene help file
Expression and GenBank cDNA support
Tissues where expression was observed (from 129 cDNA clones)
Origin of the cDNAs, as reported in GenBank/dbEST (tissue, stage, pathological or normal) shows that the gene is expressed in brain (seen 16 times), whole brain (9), leiomios (8), liver and spleen (8), testis (5), total brain (5), eye (4), multiple sclerosis lesions (4), breast (3), kidney (3), pooled germ cell tumors (3), amygdala (2), breast normal (2), cervical carcinoma cell line (2), cervix (2), chondrosarcoma (2), cochlea (2), ear (2), embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells (2), fetal eye (2), germinal center B cell (2), liver (2), lung (2), normal nasopharynx (2), placenta (2), prostate (2), retinoblastoma (2), thymus (2), whole embryo, mainly body (2), alveolar macrophage (once), alveolar rhabdomyosarcoma (once), blastocyst (once), blood vessels - aorta, basilar and artery (once), bone (once), cell line (once), cell lines (once), cerebellum (once), embryonic stem cells, cell lines H1, H7, andh9 (once), eye, retinoblastoma (once), fetal brain (once), hippocampus (once), hypernephroma, cell line (once), kidney, tumor tissue (once), leiomyosarcoma (once), nervous tumor (once), neuroblastoma, cell line (once), osteosarcoma, cell line (once), pluripotent cell line derived fromblastocyst inner cell mass (once), pooled human melanocyte, fetal heart, andpregnant uterus (once), primary lung epithelial cells (once), small intestine (once), substantia nigra (once), thalamus (once), uterus (once).
129 cDNA clones support the 6 variants of gene ZFP82
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This table helps analyze the pattern of expression of the gene, the tissue, cell type or disease state specificity of the alternative variants and to select cDNA clones suitable for your experiments.
cDNA accession Links to the sequence |
Tissue
most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features |
Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
BX491216 | | .a | 1 to 576 | 1 to 576 | | tiling clone, | | 576/576 (100 %) | 1 diff (99.9 %id) |
AK074942 | | .a | 20 to 2642 | 1 to 2622 | E128G T158A | available from FLJ, | | 2622/2624 (99 %) | 5 diff (99.9 %id) |
DA502494 | brain | .a | 20 to 590 | 2 to 572 | | capped | | 571/571 (100 %) | 5 diff (99.2 %id) |
DA735839 | | .a | 21 to 746 | 2 to 723 | | capped | | 722/722 (100 %) | 10 diff (98.7 %id) |
DA918380 | small intestine | .a | 21 to 575 | 2 to 556 | | capped | | 555/555 (100 %) | 0 diff (100 %id) |
CX762493 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 22 to 829 | 1 to 808 | | | Submitted on the opposite strand | 808/811 (99 %) | 13 diff (98.4 %id) |
DB118862 | thymus | .a | 23 to 579 | 2 to 558 | | capped | | 557/557 (100 %) | 1 diff (99.9 %id) |
DA293068 | hippocampus | .a | 25 to 584 | 2 to 561 | | capped | | 560/560 (100 %) | 0 diff (100 %id) |
DA379075 | thalamus | .a | 25 to 662 | 2 to 639 | | capped | | 638/638 (100 %) | 0 diff (100 %id) |
CD683684 | normal nasopharynx | .a | 25 to 491 | 16 to 483 | | | | 468/484 (96 %) | 2 diff (99.6 %id) |
DA732371 | | .a | 25 to 742 | 2 to 726 | | capped | | 725/769 (94 %) | 20 diff (97.4 %id) |
AL834267 | amygdala | .a | 28 to 2644 | 1 to 2617 | exact | tiling clone, available from DKFZ, AAA | | 2617/2617 (100 %) | 1 diff (100.0 %id) |
NM_133466.2 | | .a | 28 to 2644 | 1 to 2617 | exact | RefSeq, AAA | | 2617/2617 (100 %) | 1 diff (100.0 %id) |
DA819180 | | .a | 30 to 589 | 2 to 561 | | capped | | 560/560 (100 %) | 1 diff (99.9 %id) |
DA501859 | brain | .a | 32 to 585 | 2 to 556 | | capped | | 555/555 (100 %) | 1 diff (99.9 %id) |
GU388429 | testis | .a | 32 to 2644 | 1 to 2613 | exact | AAA | | 2613/2613 (100 %) | 1 diff (100.0 %id) |
CD697725 | normal nasopharynx | .a | 33 to 579 | 38 to 584 | | | | 547/584 (93 %) | 2 diff (99.7 %id) |
DA529741 | brain | .a | 33 to 629 | 2 to 599 | | capped | | 598/599 (99 %) | 5 diff (99.2 %id) |
DA530783 | brain | .a | 33 to 629 | 2 to 598 | | capped | | 597/597 (100 %) | 1 diff (99.9 %id) |
DA779747 | brain | .a | 33 to 610 | 2 to 579 | | capped | | 578/578 (100 %) | 0 diff (100 %id) |
AK315709 | testis | .a | 42 to 1861 | 1 to 1819 | | | | 1819/1819 (100 %) | 1 diff (100.0 %id) |
DA881222 | | .a | 42 to 595 | 2 to 555 | | capped | | 554/554 (100 %) | 1 diff (99.9 %id) |
DA341981 | substantia nigra | .a | 43 to 528 | 2 to 488 | | capped | | 487/487 (100 %) | 2 diff (99.6 %id) |
DA795149 | brain | .a | 43 to 516 | 2 to 475 | | capped | | 474/474 (100 %) | 0 diff (100 %id) |
DB078060 | testis | .a | 43 to 531 | 2 to 490 | | capped | | 489/489 (100 %) | 0 diff (100 %id) |
DB109494 | thymus | .a | 43 to 609 | 2 to 572 | | capped | | 571/571 (100 %) | 4 diff (99.3 %id) |
DR006183 | Prostate | .a | 49 to 693 | 1 to 645 | | | | 645/645 (100 %) | 4 diff (99.4 %id) |
DA781718 | brain | .a | 62 to 625 | 2 to 565 | | capped | | 564/564 (100 %) | 0 diff (100 %id) |
DB179656 | kidney, tumor tissue | .a | 75 to 629 | 2 to 557 | | capped | | 556/556 (100 %) | 1 diff (99.9 %id) |
BM452008 | eye, retinoblastoma | .a | 79 to 769 | 46 to 745 | | | | 700/895 (78 %) | 16 diff (98.3 %id) |
BX281147 | eye, retinoblastoma | .a | 82 to 498 | 1 to 417 | | | | 417/417 (100 %) | 0 diff (100 %id) |
DA767924 | brain | .a | 83 to 890 | 2 to 817 | | capped | | 816/840 (97 %) | 14 diff (98.4 %id) |
DA796141 | brain | .a | 89 to 634 | 2 to 546 | | capped | | 545/545 (100 %) | 3 diff (99.5 %id) |
DB448060 | testis | .a | 95 to 525 | 1 to 433 | | | | 433/433 (100 %) | 5 diff (98.9 %id) |
DA166508 | amygdala | .a | 117 to 661 | 2 to 546 | | capped | | 545/545 (100 %) | 1 diff (99.9 %id) |
TI_1948237463 | | .a | 262 to 1117 | 135 to 997 | | AAA | | 863/1178 (73 %) | 24 diff (98.0 %id) |
TI_1948237688 | | .a | 262 to 1021 | 135 to 901 | | | | 767/1190 (64 %) | 14 diff (98.9 %id) |
TI_1948237689 | | .a | 262 to 1051 | 149 to 948 | | | | 800/1234 (64 %) | 14 diff (98.9 %id) |
TI_1948237919 | | .a | 262 to 1069 | 132 to 951 | | | | 820/1208 (67 %) | 26 diff (97.9 %id) |
TI_1948237920 | | .a | 262 to 756 | 154 to 660 | | | | 507/1404 (36 %) | 38 diff (97.3 %id) |
EL733706 | mixed | .a | 263 to 892 | 1 to 630 | | | | 630/630 (100 %) | 0 diff (100 %id) |
TI_1948237464 | | .a | 272 to 958 | 120 to 818 | | | | 699/1179 (59 %) | 46 diff (96.1 %id) |
DA833514 | placenta | .a | 564 to 1377 | 2 to 820 | | capped | | 819/822 (99 %) | 14 diff (98.3 %id) |
AA354359 | | .a | 736 to 1064 | 1 to 332 | | | | 332/332 (100 %) | 5 diff (98.5 %id) |
AA330257 | | .a | 846 to 1154 | 1 to 309 | | | | 309/309 (100 %) | 0 diff (100 %id) |
TI_1948237921 | | .a | 986 to 1865 | 1040 to 137 | | | | 904/1291 (70 %) | 0 diff (100 %id) |
DB380285 | placenta | .a | 2106 to 2641 | 528 to 1 | | | | 528/547 (96 %) | 28 diff (94.9 %id) |
DB368185 | | .a | 2130 to 2642 | 517 to 3 | | | | 515/523 (98 %) | 0 diff (100 %id) |
DB363827 | | .a | 2324 to 2637 | 323 to 11 | | | | 313/323 (96 %) | 0 diff (100 %id) |
CN425442 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .b-u | 1 to 491 | 1 to 492 | | tiling clone, | | 492/492 (100 %) | 5 diff (99.0 %id) |
AB075828 | brain | .b-u | 105 to 5822 | 1 to 5718 | exact | tiling clone, available from KIAA, | | 5718/5718 (100 %) | 7 diff (99.9 %id) |
DR002312 | fetal brain | .b-u | 1527 to 2167 | 8 to 647 | | | | 640/647 (98 %) | 0 diff (100 %id) |
TI_1948237690 | | .b-u | 2696 to 3435 | 879 to 123 | | | | 757/1329 (56 %) | 0 diff (100 %id) |
DA684447 | | .b-u | 2736 to 3272 | 2 to 542 | | capped | | 541/541 (100 %) | 5 diff (99.1 %id) |
TI_1948237465 | | .b-u | 2760 to 3435 | 822 to 139 | | | | 684/1342 (50 %) | 0 diff (100 %id) |
CD250473 | Blood vessels - aorta, basilar and artery | .b-u | 2784 to 3449 | 1 to 678 | | | | 678/776 (87 %) | 23 diff (97.1 %id) |
TI_1948237691 | | .b-u | 2817 to 3435 | 773 to 148 | | | | 626/1342 (46 %) | 0 diff (100 %id) |
BG533870 | Liver | .b-u | 2820 to 3477 | 1 to 663 | | tiling clone, | | 663/697 (95 %) | 15 diff (97.9 %id) |
BX111412 | liver and spleen | .b-u | 2932 to 3556 | 1 to 625 | | | | 625/625 (100 %) | 0 diff (100 %id) |
R97364 | liver and spleen | .b-u | 2932 to 3346 | 1 to 425 | | | | 425/428 (99 %) | 17 diff (96.1 %id) |
BQ425401 | leiomyosarcoma, uterus | .b-u | 2941 to 3651 | 1 to 719 | | | | 719/839 (85 %) | 20 diff (97.7 %id) |
R95836 | liver and spleen | .b-u | 2980 to 3347 | 1 to 378 | | | | 378/447 (84 %) | 14 diff (96.9 %id) |
BI256603 | cervical carcinoma cell line, cervix | .b-u | 3003 to 3733 | 1 to 748 | | | | 748/749 (99 %) | 34 diff (95.5 %id) |
CN425441 | embryonic stem cells, cell lines H1, H7, andH9 | .b-u | 3046 to 3619 | 1 to 573 | | | | 573/573 (100 %) | 1 diff (99.9 %id) |
CN425440 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .b-u | 3090 to 3450 | 1 to 361 | | | | 361/361 (100 %) | 0 diff (100 %id) |
BF679498 | Prostate | .b-u | 3120 to 3661 | 1 to 542 | | | | 542/542 (100 %) | 1 diff (99.9 %id) |
W89042 | liver and spleen | .b-u | 3193 to 3338 | 1 to 145 | | | | 145/145 (100 %) | 2 diff (98.7 %id) |
AA773248 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b-u | 3202 to 3520 | 1 to 319 | | | | 319/319 (100 %) | 6 diff (98.2 %id) |
F05578 | brain, total brain | .b-u | 3231 to 3428 | 1 to 198 | | | | 198/198 (100 %) | 0 diff (100 %id) |
F05579 | brain, total brain | .b-u | 3231 to 3528 | 1 to 298 | | | | 298/298 (100 %) | 0 diff (100 %id) |
F07386 | brain, total brain | .b-u | 3231 to 3465 | 1 to 235 | | | | 235/235 (100 %) | 3 diff (98.8 %id) |
H17858 | whole brain | .b-u | 3232 to 3722 | 1 to 496 | | | | 496/496 (100 %) | 9 diff (98.2 %id) |
BE003666 | breast_normal | .b-u | 3420 to 3773 | 1 to 351 | | | | 351/351 (100 %) | 8 diff (97.8 %id) |
BE003672 | breast_normal | .b-u | 3469 to 3816 | 349 to 2 | | | Submitted on the opposite strand | 348/349 (99 %) | 0 diff (100 %id) |
BU633705 | cell lines, Chondrosarcoma | .b-u | 3495 to 4211 | 734 to 19 | | AAA | | 716/716 (100 %) | 3 diff (99.6 %id) |
BE548300 | cervical carcinoma cell line, cervix | .b-u | 3499 to 4261 | 1 to 767 | | | | 767/804 (95 %) | 29 diff (96.4 %id) |
CD370221 | Alveolar Macrophage, lung | .b-u | 3538 to 4213 | 693 to 19 | | AAA | | 675/677 (99 %) | 4 diff (99.5 %id) |
BU618382 | Cell Line, Chondrosarcoma | .b-u | 3542 to 4206 | 683 to 19 | | AAA | | 665/665 (100 %) | 0 diff (100 %id) |
AW385707 | leiomios | .b-u | 3566 to 4056 | 5 to 494 | | | | 490/497 (98 %) | 10 diff (98.0 %id) |
AW580864 | leiomios | .b-u | 3576 to 3698 | 1 to 123 | | | | 123/123 (100 %) | 3 diff (97.6 %id) |
AW580860 | leiomios | .b-u | 3579 to 4055 | 477 to 2 | | | | 476/477 (99 %) | 0 diff (100 %id) |
BE072066 | breast | .b-u | 3579 to 4033 | 1 to 455 | | | | 455/455 (100 %) | 2 diff (99.6 %id) |
AA777644 | liver and spleen | .b-u | 3698 to 4211 | 512 to 1 | | | | 512/512 (100 %) | 2 diff (99.7 %id) |
DB368615 | | .b-u | 3715 to 4208 | 504 to 7 | | | | 498/508 (98 %) | 0 diff (100 %id) |
AA706896 | liver and spleen | .b-u | 3718 to 4211 | 492 to 1 | | | | 492/492 (100 %) | 3 diff (99.4 %id) |
AI990154 | pooled germ cell tumors | .b-u | 3731 to 4217 | 489 to 3 | | | | 487/490 (99 %) | 0 diff (100 %id) |
BQ309615 | breast | .b-u | 3741 to 4039 | 301 to 1 | | | | 301/306 (98 %) | 13 diff (95.8 %id) |
AW580775 | leiomios | .b-u | 3751 to 4047 | 316 to 21 | | | | 296/317 (93 %) | 0 diff (100 %id) |
AI631652 | pooled germ cell tumors | .b-u | 3759 to 4217 | 461 to 3 | | | | 459/461 (99 %) | 0 diff (100 %id) |
AW296117 | | .b-u | 3765 to 4214 | 467 to 18 | | AAA | | 450/450 (100 %) | 1 diff (99.8 %id) |
AI969283 | pooled germ cell tumors | .b-u | 3772 to 4217 | 448 to 3 | | | | 446/448 (99 %) | 0 diff (100 %id) |
BG165087 | hypernephroma, cell line, Kidney | .b-u | 3772 to 4217 | 1 to 443 | | | | 443/478 (92 %) | 6 diff (98.8 %id) |
R95837 | liver and spleen | .b-u | 3819 to 4207 | 404 to 11 | | | | 394/473 (83 %) | 0 diff (100 %id) |
AA682517 | liver and spleen | .b-u | 3825 to 4206 | 381 to 1 | | | | 381/381 (100 %) | 3 diff (99.3 %id) |
AA832267 | germinal center B cell | .b-u | 3870 to 4206 | 351 to 16 | | AAA | | 336/336 (100 %) | 1 diff (99.8 %id) |
AW968554 | | .b-u | 3871 to 4567 | 1 to 696 | | | | 696/696 (100 %) | 5 diff (99.3 %id) |
AW968728 | | .b-u | 3987 to 4686 | 703 to 4 | | | Submitted on the opposite strand | 700/703 (99 %) | 0 diff (100 %id) |
AA927918 | pooled | .b-u | 4220 to 4687 | 467 to 1 | | | | 467/467 (100 %) | 2 diff (99.6 %id) |
H17859 | whole brain | .b-u | 4223 to 4694 | 477 to 1 | | | | 477/477 (100 %) | 11 diff (97.7 %id) |
DB513241 | testis | .b-u | 4241 to 4682 | 1 to 443 | | | Submitted on the opposite strand | 443/445 (99 %) | 4 diff (99.2 %id) |
DA573032 | whole embryo, mainly body | .b-u | 4258 to 5104 | 2 to 848 | | capped | | 847/851 (99 %) | 5 diff (99.5 %id) |
F01845 | brain, total brain | .b-u | 4402 to 4684 | 283 to 1 | | | | 283/283 (100 %) | 1 diff (99.7 %id) |
F03628 | brain, total brain | .b-u | 4459 to 4684 | 226 to 1 | | | | 226/226 (100 %) | 1 diff (99.6 %id) |
DB360174 | whole embryo, mainly body | .b-u | 5280 to 5822 | 538 to 1 | | | | 538/543 (99 %) | 12 diff (97.8 %id) |
AW369851 | breast | .b-u | 5335 to 5524 | 184 to 1 | | | | 184/186 (98 %) | 18 diff (90.4 %id) |
AW021313 | cochlea, ear | .b-u | 5439 to 5822 | 8 to 391 | | fully sequenced, AAA | Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) | 384/391 (98 %) | 0 diff (100 %id) |
BI492345 | cochlea, ear | .b-u | 5478 to 5838 | 360 to 1 | | fully sequenced, | Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) | 360/360 (100 %) | 2 diff (99.5 %id) |
C20685 | | .b-u | 5607 to 5822 | 20 to 235 | | | | 216/235 (91 %) | 0 diff (100 %id) |
BG107783 | Bone, osteosarcoma, cell line | .b-u | 5612 to 6199 | 1 to 590 | | tiling clone, | | 590/921 (64 %) | 31 diff (96.7 %id) |
AA747943 | alveolar rhabdomyosarcoma | .b-u | 5849 to 6228 | 1 to 380 | | | | 380/380 (100 %) | 5 diff (98.7 %id) |
AW975957 | | .b-u | 5855 to 6230 | 109 to 484 | | tiling clone, | | 376/588 (63 %) | 1 diff (99.9 %id) |
AA811289 | germinal center B cell | .b-u | 6043 to 6399 | 356 to 1 | | tiling clone, | | 356/356 (100 %) | 1 diff (99.8 %id) |
BE464428 | Kidney | .c | 1 to 494 | 494 to 1 | | tiling clone, | | 494/494 (100 %) | 0 diff (100 %id) |
BU147182 | brain, neuroblastoma, cell line | .c | 278 to 1165 | 1 to 888 | | tiling clone, | | 888/889 (99 %) | 6 diff (99.4 %id) |
BX118544 | whole brain | .d-u | 1 to 525 | 1 to 524 | | tiling clone, | | 524/524 (100 %) | 1 diff (99.9 %id) |
R52208 | whole brain | .d-u | 2 to 395 | 1 to 397 | | tiling clone, | | 397/397 (100 %) | 7 diff (98.3 %id) |
H09611 | whole brain | .d-u | 2 to 488 | 1 to 493 | | | | 493/498 (98 %) | 16 diff (96.8 %id) |
H22910 | whole brain | .d-u | 2 to 425 | 1 to 439 | | | | 439/481 (91 %) | 18 diff (96.3 %id) |
AW243421 | Kidney | .d-u | 207 to 664 | 17 to 474 | exact | tiling clone, AAA | Submitted on the opposite strand | 458/474 (96 %) | 0 diff (100 %id) |
T06027 | | .d-u | 220 to 499 | 1 to 280 | | | | 280/280 (100 %) | 0 diff (100 %id) |
BG617875 | Liver | .d-u | 612 to 1351 | 1 to 742 | | tiling clone, | | 742/742 (100 %) | 2 diff (99.8 %id) |
TI_149280078 | | .d-u | 1347 to 1928 | 60 to 646 | | tiling clone, AAA | Submitted on the opposite strand | 587/646 (90 %) | 0 diff (100 %id) |
BU679025 | lung, Primary Lung Epithelial Cells | .d-u | 1352 to 1928 | 2 to 582 | | tiling clone, AAA | Submitted on the opposite strand | 581/606 (95 %) | 7 diff (98.9 %id) |
H09612 | whole brain | .d-u | 1474 to 1838 | 379 to 8 | | | | 372/425 (87 %) | 0 diff (100 %id) |
AI375701 | | .d-u | 1489 to 1932 | 450 to 7 | | tiling clone, | | 444/450 (98 %) | 0 diff (100 %id) |
R52110 | whole brain | .d-u | 1504 to 1838 | 344 to 4 | | | | 341/346 (98 %) | 0 diff (100 %id) |
H24295 | whole brain | .d-u | 1546 to 1838 | 305 to 9 | | | | 297/309 (96 %) | 0 diff (100 %id) |
DA728260 | | .e | 1 to 784 | 2 to 793 | exact | tiling clone, capped | | 792/792 (100 %) | 12 diff (98.5 %id) |
BM725016 | eye, fetal eye | .e | 24 to 751 | 1 to 727 | exact | tiling clone, fully sequenced, | Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) | 727/727 (100 %) | 1 diff (99.9 %id) |
BM680223 | eye, fetal eye | .e | 721 to 1382 | 684 to 19 | | tiling clone, fully sequenced, AAA | Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) | 666/666 (100 %) | 3 diff (99.6 %id) |
H00082 | | .f-u | 1 to 194 | 1 to 195 | exact | tiling clone, | | 195/195 (100 %) | 2 diff (99.0 %id) |
T41391 | | .f-u | 5 to 198 | 20 to 209 | | tiling clone, | | 190/209 (90 %) | 0 diff (100 %id) |
AW580828 | leiomios | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
AW580851 | leiomios | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
AW580894 | leiomios | Gene ZFP82, variant not shown | | | | | Suspected internal deletion, this clone was ignored | | |
AW580908 | leiomios | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
BC032577 | Eye, retinoblastoma | Gene ZFP82, variant not shown | | | | available from MGC, AAA | This clone was ignored | | |
BI037146 | nervous_tumor | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
DA054341 | cerebellum | Gene ZFP82, variant not shown | | | | capped | This clone was ignored | | |
N50343 | multiple sclerosis lesions | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
N51567 | multiple sclerosis lesions | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
N51097 | multiple sclerosis lesions | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
N54223 | multiple sclerosis lesions | Gene ZFP82, variant not shown | | | | | This clone was ignored | | |
? | Gene Summary |
Gene on genome |
mRNA:.a, .b-u, .c, .d-u, .e, .f-u |
Alternative mRNAs features, proteins, introns, exons, sequences |
Expression Tissue |
Function, regulation, related genes C |
To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To compare alternative variants, their summarized annotations, predicted proteins, introns and exons, or to access any sequence, click the 'Alternative mRNAs features' tab. To see a specific mRNA variant diagram, sequence and annotation, click the variant name in the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.
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