Homo sapiens gene GLT25D1, encoding glycosyltransferase 25 domain containing 1.
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SUMMARY back to top
RefSeq annotates one representative transcript (NM included in AceView variant.a), but Homo sapiens cDNA sequences in GenBank, dbEST, Trace and SRA, filtered against clone rearrangements, coaligned on the genome and clustered in a minimal non-redundant way by the manually supervised AceView program, support at least 7 spliced variants.

AceView synopsis, each blue text links to tables and details
Expression: According to AceView, this gene is expressed at high level, 2.9 times the average gene in this release. The sequence of this gene is defined by 334 GenBank accessions from 303 cDNA clones, some from brain (seen 14 times), colon (12), testis (12), kidney (10), prostate (10), chondrosarcoma (9), lung (9) and 119 other tissues. We annotate structural defects or features in 14 cDNA clones.
Alternative mRNA variants and regulation: The gene contains 19 distinct introns (16 gt-ag, 2 gc-ag, 1 other). Transcription produces 9 different mRNAs, 7 alternatively spliced variants and 2 unspliced forms. There are 5 probable alternative promotors and 4 validated alternative polyadenylation sites (see the diagram). The mRNAs appear to differ by truncation of the 5' end, presence or absence of 4 cassette exons, overlapping exons with different boundaries, splicing versus retention of one intron.
Efficacy of translation may be reduced by the presence of a shorter translated product (uORF) initiating at an AUG upstream of the main open reading frame (in variant aAug10, bAug10, dAug10, fAug10).
Function: There are 7 articles specifically referring to this gene in PubMed. Functionally, the gene has been proposed to participate in pathway (Lysine degradation) and a process (lipopolysaccharide biosynthetic process). Proteins are expected to have molecular functions (procollagen galactosyltransferase activity, transferase activity, transferring glycosyl groups) and to localize in various compartments (cytoplasm, extracellular space, endoplasmic reticulum, endoplasmic reticulum lumen).
Protein coding potential: 7 spliced and the unspliced mRNAs putatively encode good proteins, altogether 8 different isoforms (4 complete, 2 COOH complete, 2 partial), some containing Glycosyltransferase family 25 (LPS biosynthesis protein) domain [Pfam], a peroxisomal domain [Psort2]; 1 of the 4 complete proteins appears to be secreted. The remaining mRNA variant (unspliced) appears not to encode a good protein.

Please quote: AceView: a comprehensive cDNA-supported gene and transcripts annotation, Genome Biology 2006, 7(Suppl 1):S12.
Map on chromosome 19, links to other databases and other names
Map: This gene GLT25D1 maps on chromosome 19, at 19p13.11 according to Entrez Gene. In AceView, it covers 27.57 kb, from 17666404 to 17693976 (NCBI 37, August 2010), on the direct strand.
Links to: manual annotations from KEGG_00310, the SNP view, gene overviews from Entrez Gene 79709, GeneCards, expression data from ECgene, UniGene, molecular and other annotations from UCSC, or our GOLD analysis.
The previous AceView annotation is here.
Other names: The gene is also known as GLT25D1, PSEC0241, FLJ22329 or MGC117270, LOC79709. It has been described as procollagen galactosyltransferase 1, hydroxylysine galactosyltransferase 1, glycosyltransferase 25 family member 1.
EC number: This gene encodes protein number: 2.4.1.50.
Closest AceView homologs in other species ?
The closest mouse gene, according to BlastP, is the AceView gene Glt25d1 (e=0.0).
The closest C.elegans gene, according to BlastP, is the AceView/WormGene 3L563 (e=2 10-67), which may contain interesting functional annotation
RNA_seq discoveries back to top
Expression/conservation in primates tissues evaluated by cross-mapping to human. back to top
GLT25D1 Gene expression in 15 primates, 16 tissues, from the NHPRTR project in sFPKM BAB SkeletalMuscle WholeBlood CHP Kidney Liver Lung Spleen CMC CMM Cerebellum HUM Brain Colon Heart LymphNode Ovary Testis JMI BoneMarrow MLM OWL PTM RMC RMI Pituitary SQM Thymus MST SMY RTL 2.90 4.39 4.10 4.39 3.82 1.45 6.65 3.33 9.41 4.71 11.6 5.79 23.2 14.3 15.3 14.3 23.2 57.1 17.6 30.6 23.2 37.6 4.71 1.55 0.42 0.59 2.35 1.45 3.82 1.26 6.65 3.33 7.13 2.35 1.91 5.79 7.13 7.64 7.64 13.3 4.39 3.10 10.8 7.64 4.10 8.19 10.1 10.1 8.78 2.70 2.70 6.65 5.40 4.39 4.71 1.55 7.64 5.79 3.33 1.78 3.57 8.19 3.57 4.71 11.6 6.21 1.78 3.10 2.90 9.41 5.79 7.64 3.10 7.64 8.78 7.64 12.4 10.1 3.33 10.8 4.10 2.35 6.21 10.8 3.82 10.8 11.6 6.65 2.19 2.70 4.39 10.1 7.13 5.04 5.40 7.64 7.64 2.70 7.13 6.21 2.52 3.57 2.70 4.39 3.33 4.71 3.33 3.57 3.57 2.19 2.05 10.1 3.57 9.41 2.70 5.04 1.78 10.8 8.78 7.13 2.70 6.21 5.40 2.19 5.79 6.21 4.10 3.82 17.6 7.13 6.65 5.79 8.19 11.6 4.39 15.3 3.33 2.05 3.82 2.19 1.45 5.04 2.90 3.33 8.78 2.52 5.79 5.04 5.04 1.10 4.71 2.90 1.91 9.41 3.57 7.13 0.72 Expression quantiles None Weak 1 2 3 4 5 6 7 8 10 20 This gene All genes log2 distributions RNA-seq gene expression profile across 16 selected tissues from the Non-Human Primates Reference Transcriptome Resource (link to NHPRTR project).
- Primates: Apes (HUM: Human (Illumina BodyMap 2), CHP: Chimpanzee), Old World monkeys (PTM: Pig-Tailed Macaque, JMI Japanese Macaque, RMI Rhesus Macaque Indian, RMC Rhesus Macaque Chinese, CMM Cynomolgus Macaque Mauritian, CMC Cynomolgus Macaque Chinese, BAB Olive Baboon, SMY Sooty Mangabey); New World monkeys (MST common Marmoset, SQM Squirrel Monkey, OWL Owl Monkey); and Lemurs (MLM Mouse Lemur, RTL Ring-Tailed Lemur).
- The level for significantly expressed genes is color coded in 8 equal sized bins (light to dark green). Light gray is for weak not-accurately measured expression (2 to 8 reads above intergenic background); dark gray for no expression or no sequence conservation (0 read in gene). The plot to the right shows the distribution of measured expression values in all tissues for all genes (blue) and for this gene (green), in Magic index = log2(1000 sFPKM).
You may also examine the strand-specific genome coverage plots on the experimental AceView/Magic hub at UCSC, by tissue or by species. Tracks may be slow to load; please reload if some tracks come up yellow-greenish, and thanks to UCSC for the great work!.
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          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene GLT25D1 5' 3' encoded on plus strand of chromosome 19 from 17,666,404 to 17,693,976 36091 72677 100318 72770 78309 110192 83348 64774 84905 72976 160668 a [NM] 749 10 g 1 72770 5148 2428 110192 83348 64774 84905 72976 160668 b h-u 778 83348 64774 84905 72976 160668 c 875 72677 100318 72770 f 83348 64774 84905 72976 160668 d 160668 e i-u 5kb 0 379 bp exon 379 bp exon 354 bp uORF 379 bp exon 3337 bp [gt-ag] intron 34 GenBank accessions 36057 RNA-seq supporting reads 6359 UHR pooled cells 1187 Brain 1922 Blood 26511 Neuroblastoma 78 Other (also 1078 Primates bodymap) 354 bp uORF 111 bp exon 111 bp exon 926 bp [gt-ag] intron 35 GenBank accessions 72642 RNA-seq supporting reads 15682 UHR pooled cells 3085 Brain 5241 Blood 48093 Neuroblastoma 541 Other (also 2340 Primates bodymap) 118 bp exon 118 bp exon 6940 bp [gt-ag] intron 36 GenBank accessions 100282 RNA-seq supporting reads 21555 UHR pooled cells 3976 Brain 10807 Blood 63362 Neuroblastoma 582 Other (also 3769 Primates bodymap) 135 bp exon 135 bp exon 968 bp [gt-ag] intron 41 GenBank accessions 72729 RNA-seq supporting reads 15184 UHR pooled cells 2892 Brain 9359 Blood 44905 Neuroblastoma 389 Other (also 4324 Primates bodymap) 205 bp exon 205 bp exon 3769 bp [gt-ag] intron 32 GenBank accessions 78277 RNA-seq supporting reads 18882 UHR pooled cells 3088 Brain 4271 Blood 51589 Neuroblastoma 447 Other (also 2965 Primates bodymap) 120 bp exon 120 bp exon 4592 bp [gt-ag] intron 28 GenBank accessions 110164 RNA-seq supporting reads 25255 UHR pooled cells 4617 Brain 5063 Blood 74778 Neuroblastoma 451 Other (also 2557 Primates bodymap) 77 bp exon 77 bp exon 89 bp [gt-ag] intron 27 GenBank accessions 83321 RNA-seq supporting reads 18679 UHR pooled cells 3466 Brain 4710 Blood 56051 Neuroblastoma 415 Other (also 2464 Primates bodymap) 107 bp exon 107 bp exon 489 bp [gt-ag] intron 30 GenBank accessions 64744 RNA-seq supporting reads 13601 UHR pooled cells 2334 Brain 4009 Blood 44448 Neuroblastoma 352 Other (also 1816 Primates bodymap) 133 bp exon 133 bp exon 1392 bp [gt-ag] intron 34 GenBank accessions 84871 RNA-seq supporting reads 19235 UHR pooled cells 3423 Brain 5968 Blood 55739 Neuroblastoma 506 Other (also 2444 Primates bodymap) 128 bp exon 128 bp exon 1089 bp [gt-ag] intron 43 GenBank accessions 72933 RNA-seq supporting reads 21773 UHR pooled cells 2533 Brain 5328 Blood 42955 Neuroblastoma 344 Other (also 3078 Primates bodymap) 207 bp exon 207 bp exon 271 bp [gt-ag] intron 40 GenBank accessions 160628 RNA-seq supporting reads 38393 UHR pooled cells 7195 Brain 7864 Blood 106376 Neuroblastoma 800 Other (also 4133 Primates bodymap) 1982 bp exon 1982 bp exon 171 accessions, NM_024656.2 some from brain (seen 8 times) colon (8), testis (8) kidney (7), embryonic stem cells cell lines H1, H7, andh9 (6) capped 5' end, 45 accessions Validated 3' end, 2 accessions Validated 3' end, 7 accessions Validated 3' end, 6 accessions 1982 bp exon 253 bp exon 1349 bp [gt-ag] intron 1 GenBank accession 748 RNA-seq supporting reads 40 UHR pooled cells 16 Brain 27 Blood 663 Neuroblastoma 2 Other 29 bp exon 1744 bp [ag-ag] fuzzy intron 1 GenBank accession 9 RNA-seq supporting reads 1 UHR pooled cells 3 Brain 5 Blood (also 34 Primates bodymap) 67 bp exon 1 accession from b-cell chronic lymphotic leukemia 67 bp exon 150 bp exon 150 bp exon 57 bp uORF 150 bp exon 1222 bp [gt-ag] intron 1 GenBank accession 135 bp exon 135 bp exon 968 bp [gt-ag] intron 41 GenBank accessions 72729 RNA-seq supporting reads 15184 UHR pooled cells 2892 Brain 9359 Blood 44905 Neuroblastoma 389 Other (also 4324 Primates bodymap) 205 bp exon 205 bp exon 3156 bp [gt-ag] intron 2 GenBank accessions 5146 RNA-seq supporting reads 383 UHR pooled cells 319 Brain 337 Blood 4058 Neuroblastoma 49 Other (also 2 Primates bodymap) 118 bp exon 118 bp exon 118 bp exon 495 bp [gc-ag] intron 1 GenBank accession 2427 RNA-seq supporting reads 214 UHR pooled cells 154 Brain 184 Blood 1855 Neuroblastoma 20 Other (also 2 Primates bodymap) 120 bp exon 120 bp exon 4592 bp [gt-ag] intron 28 GenBank accessions 110164 RNA-seq supporting reads 25255 UHR pooled cells 4617 Brain 5063 Blood 74778 Neuroblastoma 451 Other (also 2557 Primates bodymap) 77 bp exon 77 bp exon 89 bp [gt-ag] intron 27 GenBank accessions 83321 RNA-seq supporting reads 18679 UHR pooled cells 3466 Brain 4710 Blood 56051 Neuroblastoma 415 Other (also 2464 Primates bodymap) 107 bp exon 107 bp exon 489 bp [gt-ag] intron 30 GenBank accessions 64744 RNA-seq supporting reads 13601 UHR pooled cells 2334 Brain 4009 Blood 44448 Neuroblastoma 352 Other (also 1816 Primates bodymap) 133 bp exon 133 bp exon 1392 bp [gt-ag] intron 34 GenBank accessions 84871 RNA-seq supporting reads 19235 UHR pooled cells 3423 Brain 5968 Blood 55739 Neuroblastoma 506 Other (also 2444 Primates bodymap) 128 bp exon 128 bp exon 1089 bp [gt-ag] intron 43 GenBank accessions 72933 RNA-seq supporting reads 21773 UHR pooled cells 2533 Brain 5328 Blood 42955 Neuroblastoma 344 Other (also 3078 Primates bodymap) 207 bp exon 207 bp exon 271 bp [gt-ag] intron 40 GenBank accessions 160628 RNA-seq supporting reads 38393 UHR pooled cells 7195 Brain 7864 Blood 106376 Neuroblastoma 800 Other (also 4133 Primates bodymap) 193 bp exon 193 bp exon 117 bp [gc-ag] intron 1 GenBank accession 2 RNA-seq supporting reads 1 UHR pooled cells 1 Neuroblastoma 252 bp exon 252 bp exon 3 accessions, some from brain (seen once) fetal brain (once), kidney hypernephroma (once) testis (once) capped 5' end, 1 accession 252 bp exon 815 bp exon 3 accessions, some from b-cell chronic lymphotic leukemia (seen 2 times) stomach (once) 815 bp exon 102 bp exon 102 bp exon 8481 bp [gt-ag] intron 2 GenBank accessions 776 RNA-seq supporting reads 221 UHR pooled cells 14 Brain 43 Blood 493 Neuroblastoma 5 Other (also 7 Primates bodymap) 77 bp exon 89 bp [gt-ag] intron 27 GenBank accessions 83321 RNA-seq supporting reads 18679 UHR pooled cells 3466 Brain 4710 Blood 56051 Neuroblastoma 415 Other (also 2464 Primates bodymap) 107 bp exon 489 bp [gt-ag] intron 30 GenBank accessions 64744 RNA-seq supporting reads 13601 UHR pooled cells 2334 Brain 4009 Blood 44448 Neuroblastoma 352 Other (also 1816 Primates bodymap) 133 bp exon 1392 bp [gt-ag] intron 34 GenBank accessions 84871 RNA-seq supporting reads 19235 UHR pooled cells 3423 Brain 5968 Blood 55739 Neuroblastoma 506 Other (also 2444 Primates bodymap) 128 bp exon 1089 bp [gt-ag] intron 43 GenBank accessions 72933 RNA-seq supporting reads 21773 UHR pooled cells 2533 Brain 5328 Blood 42955 Neuroblastoma 344 Other (also 3078 Primates bodymap) 207 bp exon 271 bp [gt-ag] intron 40 GenBank accessions 160628 RNA-seq supporting reads 38393 UHR pooled cells 7195 Brain 7864 Blood 106376 Neuroblastoma 800 Other (also 4133 Primates bodymap) 548 bp exon 2 accessions, some from adenocarcinoma cell line (seen once) liver (once), liver, adenocarcinoma (once) 548 bp exon 118 bp exon 118 bp exon 126 bp uORF 2631 bp [gt-ag] intron 1 GenBank accession 874 RNA-seq supporting reads 38 UHR pooled cells 55 Brain 79 Blood 700 Neuroblastoma 2 Other 111 bp exon 126 bp uORF 111 bp exon 111 bp exon 926 bp [gt-ag] intron 35 GenBank accessions 72642 RNA-seq supporting reads 15682 UHR pooled cells 3085 Brain 5241 Blood 48093 Neuroblastoma 541 Other (also 2340 Primates bodymap) 118 bp exon 118 bp exon 6940 bp [gt-ag] intron 36 GenBank accessions 100282 RNA-seq supporting reads 21555 UHR pooled cells 3976 Brain 10807 Blood 63362 Neuroblastoma 582 Other (also 3769 Primates bodymap) 135 bp exon 135 bp exon 968 bp [gt-ag] intron 41 GenBank accessions 72729 RNA-seq supporting reads 15184 UHR pooled cells 2892 Brain 9359 Blood 44905 Neuroblastoma 389 Other (also 4324 Primates bodymap) 69 bp exon 1 accession from placenta capped 5' end, 1 accession 69 bp exon 196 bp exon 196 bp exon 84 bp uORF 196 bp exon 196 bp exon 89 bp [gt-ag] intron 27 GenBank accessions 83321 RNA-seq supporting reads 18679 UHR pooled cells 3466 Brain 4710 Blood 56051 Neuroblastoma 415 Other (also 2464 Primates bodymap) 107 bp exon 107 bp exon 489 bp [gt-ag] intron 30 GenBank accessions 64744 RNA-seq supporting reads 13601 UHR pooled cells 2334 Brain 4009 Blood 44448 Neuroblastoma 352 Other (also 1816 Primates bodymap) 133 bp exon 133 bp exon 1392 bp [gt-ag] intron 34 GenBank accessions 84871 RNA-seq supporting reads 19235 UHR pooled cells 3423 Brain 5968 Blood 55739 Neuroblastoma 506 Other (also 2444 Primates bodymap) 128 bp exon 128 bp exon 1089 bp [gt-ag] intron 43 GenBank accessions 72933 RNA-seq supporting reads 21773 UHR pooled cells 2533 Brain 5328 Blood 42955 Neuroblastoma 344 Other (also 3078 Primates bodymap) 207 bp exon 207 bp exon 271 bp [gt-ag] intron 40 GenBank accessions 160628 RNA-seq supporting reads 38393 UHR pooled cells 7195 Brain 7864 Blood 106376 Neuroblastoma 800 Other (also 4133 Primates bodymap) 1980 bp exon 1980 bp exon 1 accession capped 5' end, 1 accession 1980 bp exon 954 bp exon 954 bp exon 42 bp uORF 954 bp exon 954 bp exon 271 bp [gt-ag] intron 40 GenBank accessions 160628 RNA-seq supporting reads 38393 UHR pooled cells 7195 Brain 7864 Blood 106376 Neuroblastoma 800 Other (also 4133 Primates bodymap) 1986 bp exon 1986 bp exon 125 accessions, some from chondrosarcoma (seen 7 times) ovary (5), pooled germ cell tumors (5) prostate (5), adenocarcinoma (4) capped 5' end, 4 accessions Validated 3' end, 36 accessions 1986 bp exon 594 bp exon 594 bp exon 1 accession from spleen capped 5' end, 1 accession 594 bp exon Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
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Sequences: click on the numbers to get the DNA back to top
mRNA variant mRNA matching the genome Best predicted protein 5' UTR 3' UTR uORF Upstream sequence Transcription
unit
pre-mRNA
Downstream sequence
aAug10 3702 bp 622 aa 119 bp 1714 bp 351 bp 2kb including Promoter 27564 bp 1kb
bAug10 1825 bp 350 aa 538 bp 234 bp 54 bp 2kb including Promoter 15705 bp 1kb
cAug10 1302 bp 339 aa 280 bp 2kb 13113 bp 1kb
dAug10 2751 bp 285 aa 181 bp 1712 bp 81 bp 2kb including Promoter 6081 bp 1kb
eAug10 2940 bp 151 aa 766 bp 1718 bp 39 bp 2kb including Promoter 3211 bp 1kb
fAug10 551 bp 138 aa 137 bp 123 bp 2kb including Promoter 12016 bp 1kb
gAug10 349 bp 116 aa 2kb 3442 bp 1kb
hAug10-unspliced 815 bp 102 aa 506 bp 2kb 815 bp 1kb
iAug10-unspliced 594 bp 21 aa 103 bp 425 bp 2kb including Promoter 594 bp 1kb

Gene neighbors and Navigator on chromosome 19p13.11 back to top
MYO9B D C I R P C C C C USE1 C I R P OCEL1 C R C19orf62andANKLE1 D C I R P MRPL34 C R P DDA1 C I R P GTPBP3 D C I R P FAM125A C I R P SLC27A1 C R P PGLS C I R P FAM129C C R P GLT25D1 C R P MAP1S D C I R P FCHO1 C I R P B3GNT3 C R P RPL18AandSNORA68 C I R P SLC5A5 D C R P CCDC124 C R KCNN1 C R P ARRDC2 C R P R G C R C R C C I R P USHBP1andNR2F6 C C R ABHD8 C I R P ANO8 C R P PLVAP C R D R P BST2 C R P NXNL1 D C I R P UNC13A C R D C I R P INSL3 D C I R P JAK3 R 100kb 0 MYO9B, 388 accessions 23 variants nawtarbu, 16 accessions veeglaw, 2 accessions noytarbu, 4 accessions dawkee, 1 accession USE1, 124 accessions, 6 variants OCEL1, 136 accessions 17 variants C19orf62andANKLE1, 622 accessions 28 variants MRPL34, 187 accessions 7 variants DDA1, 367 accessions, 6 variants GTPBP3, 274 accessions 25 variants FAM125A, 300 accessions 23 variants SLC27A1, 123 accessions 11 variants PGLS, 289 accessions, 11 variants FAM129C, 50 accessions 9 variants GLT25D1, 320 accessions 9 variants MAP1S, 300 accessions 21 variants FCHO1, 189 accessions 34 variants B3GNT3, 199 accessions 7 variants RPL18AandSNORA68, 485 accessions 6 variants SLC5A5, 29 accessions 2 variants CCDC124, 291 accessions 4 variants KCNN1, 35 accessions, 6 variants ARRDC2, 302 accessions 10 variants tomure, 3 accessions, 2 variants LOC440514, 19 accessions tyglaw, 1 accession tawglaw, 1 accession tomoma, 3 accessions voglaw, 1 accession swukaw, 1 accession skopee, 10 accessions wuglaw, 1 accession weeglaw, 1 accession ducher, 1 accession worglaw, 2 accessions zaglaw, 3 accessions zerglaw, 1 accession bukee, 1 accession dakee, 1 accession charglaw, 1 accession deecher, 1 accession cheyglaw, 1 accession chorglaw, 1 accession samoma, 2 accessions, 2 variants shoglaw, 1 accession fleyglaw, 1 accession powy, 5 accessions putarbu, 2 accessions florglaw, 1 accession peetarbu, 3 accessions plyglaw, 1 accession kucher, 1 accession nucher, 1 accession parwy, 1 accession spapee, 3 accessions fakee, 1 accession slaglaw, 1 accession smaglaw, 1 accession snarglaw, 2 accessions sneyglaw, 2 accessions tacher, 1 accession sperglaw, 1 accession darglee, 1 accession deeglee, 1 accession faglee, 2 accessions zacher, 1 accession boper, 2 accessions cheycher, 1 accession rotarbu, 1 accession gerglee, 2 accessions boyper, 1 accession rartarbu, 1 accession reytarbu, 1 accession blawcher, 1 accession jarglee, 2 accessions sutarbu, 1 accession jerglee, 1 accession feyper, 1 accession koglee, 3 accessions sawtarbu, 1 accession luglee, 1 accession jarkee, 1 accession flacher, 1 accession jeekee, 1 accession laper, 1 accession jorkee, 1 accession sortarbu, 3 accessions nawglee, 1 accession neeglee, 1 accession nerglee, 1 accession neyglee, 1 accession pawglee, 1 accession ruwy, 1 accession larkee, 1 accession ruglee, 1 accession rawglee, 1 accession lersarbo, 3 accessions soglee, 1 accession morsawbo, 2 accessions snocher, 1 accession seeglee, 1 accession soyglee, 1 accession torglee, 4 accessions vuglee, 1 accession snawcher, 1 accession veyglee, 1 accession flerzoy, 2 accessions stacher, 1 accession rarwy, 1 accession moyori, 1 accession teytarbu, 2 accessions simoma, 2 accessions, 2 variants cheeglee, 1 accession chorglee, 1 accession leykee, 1 accession bloglee, 2 accessions loykee, 1 accession bleeglee, 1 accession toytarbu, 1 accession meekee, 1 accession snawchee, 1 accession miyori, 1 accession varglaw, 1 accession nartarbu, 1 accession dacher, 1 accession vawglaw, 1 accession neetarbu, 1 accession neytarbu, 1 accession zoglaw, 1 accession zorglaw, 1 accession chaglaw, 1 accession cherglaw, 2 accessions deycher, 1 accession patarbu, 1 accession goycher, 1 accession shorglaw, 1 accession potarbu, 1 accession klaglaw, 1 accession klawglaw, 1 accession plawglaw, 1 accession derkee, 3 accessions pleeglaw, 1 accession soycher, 1 accession skuglaw, 1 accession slawglaw, 1 accession portarbu, 1 accession gerkee, 1 accession snyglaw, 4 accessions goykee, 1 accession spawglaw, 1 accession speeglaw, 2 accessions sterglaw, 5 accessions steyglaw, 3 accessions storglaw, 1 accession vercher, 1 accession dawglee, 1 accession feeglee, 1 accession rutarbu, 1 accession choycher, 2 accessions foyglee, 1 accession gawglee, 1 accession berper, 2 accessions shercher, 1 accession duper, 2 accessions roytarbu, 1 accession blucher, 1 accession jawglee, 1 accession jeeglee, 1 accession jorglee, 2 accessions joper, 7 accessions flersoy, 16 accessions blozoy, 5 accessions keeglee, 1 accession jykee, 1 accession florsoy, 1 accession leyglee, 1 accession jeykee, 2 accessions plercher, 1 accession marglee, 17 accessions 2 variants skawcher, 2 accessions meysawbo, 2 accessions nuper, 5 accessions glusoy, 2 accessions glosoy, 5 accessions keykee, 1 accession saper, 4 accessions puglee, 1 accession lakee, 1 accession lerkee, 1 accession reeglee, 1 accession tawtarbu, 1 accession sorglee, 1 accession moysawbo, 2 accessions nysawbo, 1 accession chawglee, 2 accessions shaglee, 1 accession bleyglee, 1 accession zoyper, 1 accession votarbu, 1 accession HAUS8, 154 accessions 10 variants shoysoy, 4 accessions 2 variants feykee, 1 accession USHBP1andNR2F6, 451 accessions 16 variants stoypee, 2 accessions ABHD8, 268 accessions 5 variants ANO8, 35 accessions, 7 variants PLVAP, 286 accessions 4 variants jaglee, 1 accession mawbey, 4 accessions BST2, 467 accessions, 3 variants NXNL1, 47 accessions, 4 variants UNC13A, 138 accessions 7 variants glawsoy, 5 accessions 2 variants shaseebu, 2 accessions INSL3, 75 accessions, 3 variants JAK3, 109 accessions, 11 variants reewy, 5 accessions, 2 variants ZOOM IN                D:disease,C:conserved,I:interactions,R:regulation,P:publications         Read more...
Annotated mRNA diagrams back to top
Bibliography:               7 articles in PubMed back to top
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To compare alternative variants, their summarized annotations, predicted proteins, introns and exons, or to access any sequence, click the 'Alternative mRNAs features' tab. To see a specific mRNA variant diagram, sequence and annotation, click the variant name in the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

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