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Gene ZSCAN1andLETM1P2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
20 supporting clones for gene ZSCAN1andLETM1P2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK091098 substantia nigra ZSCAN1andLETM1P2.a 1 to 2053 2 to 2052 E132G tiling clone, available from FLJ,   2052/2052
(100 %)
6 diff
(99.8 %id)
AX746779   ZSCAN1andLETM1P2.a 1 to 2053 2 to 2052 E132G     2052/2052
(100 %)
6 diff
(99.8 %id)
NM_182572.3   ZSCAN1andLETM1P2.a 1 to 2053 2 to 2054 exact RefSeq,   2054/2054
(100 %)
0 diff
(100 %id)
DA345803 substantia nigra ZSCAN1andLETM1P2.a 1 to 586 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
BG715512 brain, hypothalamus ZSCAN1andLETM1P2.a 35 to 523 1 to 509   available from MGC,   509/514
(99 %)
42 diff
(91.9 %id)
DB527128 testis ZSCAN1andLETM1P2.a 1400 to 2037 1 to 637   tiling clone, Submitted on the opposite strand 637/640
(99 %)
4 diff
(99.4 %id)
DB519624 testis ZSCAN1andLETM1P2.a 1602 to 2053 1 to 452     Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
DB310233 substantia nigra ZSCAN1andLETM1P2.a 1801 to 2053 254 to 1       254/254
(100 %)
1 diff
(99.7 %id)
BC107729 lung ZSCAN1andLETM1P2.b 1 to 959 1 to 959 P196R tiling clone, AAA   959/959
(100 %)
11 diff
(98.9 %id)
AW770724 carcinoid, lung ZSCAN1andLETM1P2.b 17 to 68 1 to 52   tiling clone, Submitted on the opposite strand 52/52
(100 %)
2 diff
(96.2 %id)
EL737121 mixed ZSCAN1andLETM1P2.b 349 to 884 1 to 536       536/621
(86 %)
4 diff
(99.4 %id)
TI_1948230067   ZSCAN1andLETM1P2.b 349 to 874 137 to 662       526/1413
(37 %)
22 diff
(98.5 %id)
AI564769 anaplastic oligodendroglioma, brain ZSCAN1andLETM1P2.b 493 to 954 462 to 1       462/462
(100 %)
2 diff
(99.6 %id)
BM689967 eye, Retina Foveal and Macular ZSCAN1andLETM1P2.b 578 to 899 1 to 322   AAA   322/322
(100 %)
2 diff
(99.4 %id)
W58330 heart ZSCAN1andLETM1P2.c-u 1 to 142 1 to 141   tiling clone,   141/143
(98 %)
3 diff
(98.0 %id)
BM692204 eye, human retina ZSCAN1andLETM1P2.c-u 48 to 308 7 to 267   tiling clone,   261/267
(97 %)
0 diff
(100 %id)
BU728750 eye, human retina ZSCAN1andLETM1P2.c-u 346 to 863 536 to 19   tiling clone, AAA   518/518
(100 %)
2 diff
(99.7 %id)
W58016 heart ZSCAN1andLETM1P2.c-u 433 to 697 381 to 116       266/279
(95 %)
0 diff
(100 %id)
DB454187 testis ZSCAN1andLETM1P2.d-u 1 to 477 1 to 477 D120Y P144T tiling clone,   477/477
(100 %)
2 diff
(99.6 %id)
AY280370   ZSCAN1andLETM1P2.e 1 to 811 1 to 811 exact tiling clone, AAA   811/811
(100 %)
0 diff
(100 %id)
BC048099 Brain, hypothalamus ZSCAN1andLETM1P2.e 1 to 770 1 to 770 W4R available from MGC, AAA   770/770
(100 %)
4 diff
(99.5 %id)
AI627414 pooled germ cell tumors ZSCAN1andLETM1P2.f-u 1 to 447 1 to 442   tiling clone, Submitted on the opposite strand 442/445
(99 %)
4 diff
(99.2 %id)
BI461169 testis ZSCAN1andLETM1P2.f-u 176 to 647 1 to 469 V26L L27F F29H H30V V31D ... tiling clone,   469/469
(100 %)
7 diff
(98.6 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C