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Gene ZNF613TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
83 supporting clones for gene ZNF613 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA877358 Prostate .a 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
3 diff
(99.5 %id)
DA872659 Prostate .a 77 to 550 2 to 475   capped   474/474
(100 %)
1 diff
(99.8 %id)
NM_001031721.3   .a 215 to 2551 1 to 2337 exact RefSeq, AAA   2337/2337
(100 %)
0 diff
(100 %id)
DA146775 amygdala .a 232 to 813 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
AL709956 human skeletal muscle .a 242 to 912 1 to 675       675/675
(100 %)
5 diff
(99.3 %id)
DA519273 brain .a 250 to 809 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA526767 brain .a 250 to 805 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BC057776 Placenta, pre-eclamptic .a 256 to 2548 1 to 2293 D84N tiling clone, available from MGC, AAA   2293/2293
(100 %)
2 diff
(100.0 %id)
CB995038 placenta, pre-eclamptic placenta .a 256 to 961 28 to 736       709/752
(94 %)
13 diff
(98.3 %id)
CB990868 placenta, pre-eclamptic placenta .a 256 to 692 28 to 472       445/1099
(40 %)
14 diff
(98.8 %id)
DA090497 cerebellum .a 257 to 818 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA502718 brain .a 257 to 809 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA522574 brain .a 257 to 814 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA725574   .a 257 to 823 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA760987 tongue .a 257 to 1120 2 to 892   tiling clone, capped   891/894
(99 %)
31 diff
(96.6 %id)
DA938026 Spleen .a 257 to 851 2 to 596   capped   595/596
(99 %)
2 diff
(99.7 %id)
DA866432 Prostate .a 265 to 805 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA285790 corpus callosum .a 266 to 760 2 to 497   capped   496/496
(100 %)
2 diff
(99.6 %id)
DA654827   .a 267 to 835 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA819150   .a 276 to 839 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB039362 testis .a 276 to 857 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
CN344821 embryonic stem cells, DMSO-treated H9 cellline .a 279 to 857 1 to 579       579/579
(100 %)
4 diff
(99.4 %id)
BQ232832 melanotic melanoma, skin .a 294 to 1161 1 to 876       876/877
(99 %)
26 diff
(97.1 %id)
DN991886 brain, whole brain .a 930 to 1514 9 to 593       585/593
(98 %)
6 diff
(99.0 %id)
AW949214 prostate_tumor .a 1287 to 1628 13 to 360       348/360
(96 %)
17 diff
(95.3 %id)
BG679145 skin, squamous cell carcinoma .a 1351 to 2122 1 to 775       775/776
(99 %)
7 diff
(99.1 %id)
FN097899 breast carcinoma .a 1395 to 1494 1 to 98       98/98
(100 %)
2 diff
(98.0 %id)
TI_149312798   .a 1698 to 2547 921 to 85   AAA   837/961
(87 %)
20 diff
(98.0 %id)
CN344822 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1717 to 2103 1 to 387       387/387
(100 %)
0 diff
(100 %id)
BM978342 lung .a 1729 to 2547 828 to 19   AAA   810/810
(100 %)
16 diff
(98.1 %id)
CN344820 embryonic stem cells, DMSO-treated H9 cellline .a 1730 to 2445 7 to 722       716/722
(99 %)
6 diff
(99.2 %id)
BU627586 Bone, Enchondroma cell line .a 1807 to 2547 756 to 19   AAA   738/813
(90 %)
3 diff
(99.7 %id)
CA427456 Cell Line, Chondrosarcoma .a 1897 to 2551 674 to 19   tiling clone, AAA   656/656
(100 %)
2 diff
(99.7 %id)
AA502972 Prostate .a 1978 to 2341 1 to 364       364/364
(100 %)
5 diff
(98.7 %id)
BX118268   .a 2010 to 2547 1 to 538   AAA   538/538
(100 %)
0 diff
(100 %id)
AA447439   .a 2010 to 2543 1 to 534   fully sequenced,   534/534
(100 %)
0 diff
(100 %id)
DB325308 tongue .a 2016 to 2547 533 to 1       533/533
(100 %)
1 diff
(99.9 %id)
CB048611 Prostate .a 2031 to 2523 10 to 502       493/502
(98 %)
6 diff
(98.9 %id)
FN052826 breast carcinoma .a 2035 to 2105 71 to 1     Submitted on the opposite strand 71/72
(98 %)
1 diff
(98.7 %id)
BM661827 eye, Retina Foveal and Macular .a 2037 to 2516 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AA779758   .a 2075 to 2548 476 to 3       474/476
(99 %)
0 diff
(100 %id)
BF055471 pooled .a 2092 to 2548 459 to 3       457/459
(99 %)
0 diff
(100 %id)
AI475432 colon, moderately-differentiated adenocarcinoma .a 2101 to 2547 472 to 26   AAA   447/447
(100 %)
0 diff
(100 %id)
TI_157601817   .a 2101 to 2549 483 to 35   AAA   449/899
(49 %)
5 diff
(99.5 %id)
CF529344 placenta .a 2101 to 2549 466 to 18   AAA   449/459
(97 %)
5 diff
(99.0 %id)
DB517911 testis .a 2107 to 2547 1 to 441     Submitted on the opposite strand 441/441
(100 %)
1 diff
(99.8 %id)
AI888962 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2122 to 2549 429 to 2       428/429
(99 %)
0 diff
(100 %id)
BQ012400 placenta .a 2128 to 2549 438 to 17   AAA   422/424
(99 %)
0 diff
(100 %id)
BF434587 Kidney .a 2274 to 2551 278 to 1       278/278
(100 %)
0 diff
(100 %id)
AA447440   .a 2276 to 2549 276 to 1   fully sequenced,   276/276
(100 %)
6 diff
(97.9 %id)
W19153 lung .a 2288 to 2551 1 to 264   AAA   264/264
(100 %)
0 diff
(100 %id)
FN122974 breast carcinoma .a 2426 to 2518 92 to 1     Submitted on the opposite strand 92/92
(100 %)
1 diff
(99.0 %id)
BP326792 prostata .b 1 to 580 1 to 581   tiling clone,   581/581
(100 %)
3 diff
(99.5 %id)
AX721157   .b 429 to 2702 1 to 2274 exact tiling clone,   2274/2274
(100 %)
0 diff
(100 %id)
AK023652 placenta .b 1511 to 3411 1 to 1901   tiling clone, available from FLJ,   1901/1901
(100 %)
2 diff
(99.9 %id)
AU138838 placenta .b 1512 to 2268 2 to 767   capped   766/780
(98 %)
17 diff
(97.9 %id)
AA149547 uterus .b 1977 to 2546 1 to 569       569/569
(100 %)
6 diff
(99.0 %id)
BE768967 prostate_tumor .b 2540 to 3058 524 to 4       521/524
(99 %)
0 diff
(100 %id)
AI243186 pooled .b 2787 to 3241 457 to 3       455/457
(99 %)
0 diff
(100 %id)
AI243182 pooled .b 2792 to 3241 452 to 3       450/452
(99 %)
0 diff
(100 %id)
BE769055 prostate_tumor .b 2845 to 3058 219 to 5       215/219
(98 %)
0 diff
(100 %id)
BE769056 prostate_tumor .b 2845 to 3057 226 to 14       213/226
(94 %)
0 diff
(100 %id)
AU157773 placenta .b 2907 to 3411 505 to 1       505/505
(100 %)
10 diff
(98.1 %id)
BF086640 placenta_normal .b 3103 to 3369 1 to 264       264/264
(100 %)
9 diff
(96.6 %id)
AK027565   .c 1 to 2224 2 to 2225 exact tiling clone, available from FLJ,   2225/2225
(100 %)
0 diff
(100 %id)
NM_024840.3   .c 1 to 2228 2 to 2229 exact RefSeq, AAA   2229/2229
(100 %)
0 diff
(100 %id)
DA733273   .c 1 to 638 2 to 638   capped   637/637
(100 %)
4 diff
(99.4 %id)
DB365156   .c 1661 to 2224 564 to 1       564/564
(100 %)
1 diff
(99.9 %id)
TI_891526389   .d 1 to 808 22 to 826 H201Q A202T tiling clone,   805/856
(94 %)
11 diff
(98.8 %id)
DR731388 pooled .d 2 to 787 788 to 3 exact tiling clone, Submitted on the opposite strand 786/788
(99 %)
0 diff
(100 %id)
DR731387 pooled .d 9 to 793 1 to 783   tiling clone,   783/785
(99 %)
7 diff
(99.2 %id)
DA928739 small intestine .e 1 to 533 10 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
DA430554 colon .e 1 to 565 8 to 572 exact tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
DB452390 testis .e 13 to 501 1 to 489       489/489
(100 %)
2 diff
(99.6 %id)
DB043703 testis .f 1 to 584 2 to 585   tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DA622282 Kidney .f 330 to 882 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA708521   .f 337 to 893 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DA656795   .f 338 to 909 2 to 573 exact tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
DA697318   .f 339 to 898 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
CD685482 normal nasopharynx .g 1 to 597 15 to 611 exact tiling clone,   597/611
(97 %)
6 diff
(99.1 %id)
DA516825 brain .g 21 to 564 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA049278   .g 30 to 430 2 to 402   capped   401/401
(100 %)
2 diff
(99.6 %id)
DA521359 brain .h 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
3 diff
(99.5 %id)
DA529481 brain .i 1 to 537 2 to 538 exact tiling clone, capped   537/537
(100 %)
1 diff
(99.9 %id)
AA309374 Liver .j-u 1 to 490 1 to 490 S8T R9V G10E V11F C12V ... tiling clone,   490/490
(100 %)
2 diff
(99.6 %id)
DA867926 Prostate Gene ZNF613, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA486582 brain Gene ZNF613, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C