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Gene ZNF562andZNF561TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
376 supporting clones for gene ZNF562andZNF561 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP341959 stomach mucosa .a 1 to 579 2 to 580   tiling clone,   580/580
(100 %)
0 diff
(100 %id)
AL517279 brain, neuroblastoma, neuroblastoma cells .a 35 to 1020 1 to 980   tiling clone,   980/988
(99 %)
15 diff
(98.5 %id)
AL517278 brain, neuroblastoma, neuroblastoma cells .a 2362 to 3334 967 to 1   tiling clone,   967/1013
(95 %)
37 diff
(96.4 %id)
DA231127 brain .b 1 to 534 2 to 535   tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
BP230901 brain .b 230 to 811 1 to 582       582/582
(100 %)
0 diff
(100 %id)
NM_152289.2   .b 230 to 4768 1 to 4539 exact RefSeq, AAA   4539/4539
(100 %)
0 diff
(100 %id)
DA098318 cerebellum .b 237 to 780 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB024946 testis .b 237 to 797 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB036090 testis .b 237 to 781 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BP200499 amygdala .b 238 to 819 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP357560 mammary gland .b 238 to 818 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB137165 thymus .b 238 to 791 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
DB240923 trachea .b 238 to 824 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA241285 brain .b 239 to 817 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA329231 hippocampus .b 239 to 889 2 to 652   capped   651/658
(98 %)
1 diff
(99.9 %id)
DB135173 thymus .b 239 to 789 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB151310 thymus .b 239 to 794 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB153011 thymus .b 239 to 815 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB250662 uterus .b 239 to 825 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB278330 uterus .b 239 to 693 2 to 456   capped   455/455
(100 %)
0 diff
(100 %id)
DB283984 uterus .b 239 to 777 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB289703 uterus .b 239 to 824 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
AK293004 trachea .b 240 to 2450 1 to 2211 exact     2211/2211
(100 %)
1 diff
(100.0 %id)
DA723861   .b 240 to 814 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB055163 testis .b 240 to 790 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB055200 testis .b 240 to 802 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB079226 testis .b 240 to 813 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB239916 trachea .b 241 to 806 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BP374676 umbilical cord .b 242 to 818 1 to 578       578/582
(99 %)
4 diff
(99.4 %id)
DB285673 uterus .b 243 to 791 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BC032668 Skin, melanotic melanoma. .b 247 to 3631 10 to 3394 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 3385/3385
(100 %)
0 diff
(100 %id)
BM463990 melanotic melanoma, skin .b 247 to 1289 31 to 1081       1051/1188
(88 %)
40 diff
(96.7 %id)
DA022604   .b 257 to 825 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA038636   .b 257 to 822 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BM193888 leukopheresis .b 261 to 516 1 to 256       256/256
(100 %)
13 diff
(95.0 %id)
BP198785 brain .b 265 to 845 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BP207729 coronary artery .b 265 to 829 1 to 565       565/565
(100 %)
3 diff
(99.5 %id)
BF172693 blood .b 266 to 503 1 to 238       238/238
(100 %)
10 diff
(95.8 %id)
DA109952 cerebellum .b 266 to 818 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA241660 brain .b 266 to 857 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA844173 placenta .b 266 to 830 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA874265 Prostate .b 266 to 830 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB283659 uterus .b 266 to 813 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BG470293 adenocarcinoma cell line, colon .b 274 to 870 1 to 609   available from MGC,   609/872
(69 %)
20 diff
(97.8 %id)
CV811135 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 276 to 1107 1 to 837       837/881
(95 %)
35 diff
(96.1 %id)
T86049 liver and spleen .b 278 to 489 1 to 214       214/214
(100 %)
4 diff
(98.2 %id)
BU431104 lymph .b 279 to 803 8 to 532       525/532
(98 %)
2 diff
(99.7 %id)
TI_154152960   .b 279 to 859 80 to 660       581/581
(100 %)
4 diff
(99.4 %id)
BQ640124 eye, retina .b 283 to 889 1 to 607       607/607
(100 %)
0 diff
(100 %id)
BC012144 Colon, adenocarcinoma .b 309 to 1457 1 to 1149   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1149/1166
(98 %)
4 diff
(99.7 %id)
DR000747 fetal brain .b 309 to 998 1 to 688       688/690
(99 %)
5 diff
(99.3 %id)
BP379312 uterus .b 331 to 902 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
BM459938 leiomyosarcoma, uterus .b 508 to 1385 1 to 878       878/1071
(81 %)
19 diff
(98.3 %id)
CD244189 testis .b 550 to 1324 1 to 778       778/889
(87 %)
6 diff
(99.4 %id)
BE293305 adenocarcinoma cell line, colon .b 611 to 1180 67 to 639       573/639
(89 %)
12 diff
(98.2 %id)
BP313995 mammary gland .b 614 to 1199 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
TI_1948126878   .b 635 to 1328 120 to 810       691/1123
(61 %)
33 diff
(97.1 %id)
TI_1948127197   .b 635 to 1300 121 to 787       667/1120
(59 %)
35 diff
(96.9 %id)
TI_1948127513   .b 635 to 1237 122 to 723       602/1164
(51 %)
11 diff
(99.1 %id)
TI_1948127813   .b 635 to 1284 123 to 774       652/1149
(56 %)
22 diff
(98.1 %id)
BP236325 coronary artery .b 637 to 1224 1 to 588       588/588
(100 %)
4 diff
(99.4 %id)
TI_1948126879   .b 638 to 1230 126 to 718       593/1397
(42 %)
10 diff
(99.3 %id)
TI_1948127198   .b 638 to 1461 124 to 948       825/1344
(61 %)
29 diff
(97.9 %id)
TI_1948127514   .b 638 to 1491 127 to 996       870/1401
(62 %)
37 diff
(97.4 %id)
TI_1948127814   .b 638 to 1370 126 to 861       736/1355
(54 %)
19 diff
(98.6 %id)
CV030777 mixed .b 642 to 1303 1 to 657       657/664
(98 %)
6 diff
(99.1 %id)
CD687747 normal nasopharynx .b 675 to 1047 17 to 393       378/393
(96 %)
10 diff
(97.5 %id)
DB130521 thymus .b 713 to 1252 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
BE928207 colon .b 766 to 1168 1 to 403       403/403
(100 %)
6 diff
(98.6 %id)
TI_1948127199   .b 844 to 1899 1189 to 123       1067/1351
(78 %)
0 diff
(100 %id)
TI_1948126880   .b 927 to 1899 1090 to 120       971/1320
(73 %)
0 diff
(100 %id)
BF381091 uterus_tumor .b 941 to 1345 415 to 9       407/415
(98 %)
0 diff
(100 %id)
AK074787   .b 969 to 3359 1 to 2391   available from FLJ,   2391/2391
(100 %)
1 diff
(100.0 %id)
DA732469   .b 969 to 1631 2 to 672   capped   671/680
(98 %)
16 diff
(97.7 %id)
BP217913 caudate nucleus .b 975 to 1558 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
AA318772 adrenal gland .b 996 to 1288 1 to 295       295/296
(99 %)
3 diff
(99.0 %id)
TI_1948127815   .b 997 to 1899 1019 to 121       899/1319
(68 %)
0 diff
(100 %id)
TI_1948127515   .b 1031 to 1899 990 to 122       869/1326
(65 %)
0 diff
(100 %id)
EL947448 eyeball .b 1039 to 1606 1 to 568       568/568
(100 %)
6 diff
(99.0 %id)
BM153032 leukopheresis .b 1079 to 1388 1 to 311       311/312
(99 %)
6 diff
(98.1 %id)
TI_1948126881   .b 1102 to 1899 908 to 123       786/1062
(74 %)
0 diff
(100 %id)
TI_1948127516   .b 1106 to 1899 908 to 123       786/1071
(73 %)
0 diff
(100 %id)
TI_1948127200   .b 1182 to 1899 838 to 122       717/1093
(65 %)
0 diff
(100 %id)
TI_1948127816   .b 1182 to 1899 835 to 126       710/1071
(66 %)
0 diff
(100 %id)
DA852099 placenta .b 1206 to 1753 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
CX785744 human embryonic stem cells .b 1437 to 2260 22 to 845       824/845
(97 %)
6 diff
(99.3 %id)
BM505293 Pancreas, Purified pancreatic islet .b 1440 to 2041 602 to 1       602/602
(100 %)
4 diff
(99.4 %id)
CK822584 Pancreas, Purified pancreatic islet .b 1456 to 2044 595 to 7     Submitted on the opposite strand 589/595
(98 %)
0 diff
(100 %id)
AA495878 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1460 to 1688 1 to 229       229/229
(100 %)
0 diff
(100 %id)
BF437602 Prostate .b 1489 to 2037 549 to 1       549/549
(100 %)
0 diff
(100 %id)
DA119204 cerebellum .b 1498 to 2035 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
AW995916 breast_normal .b 1504 to 1792 289 to 1     Submitted on the opposite strand 289/289
(100 %)
0 diff
(100 %id)
AI263449 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1509 to 2042 534 to 1       534/534
(100 %)
2 diff
(99.7 %id)
AA476780.
matches multiple genes
  .b 1523 to 2044 523 to 2     This clone was ignored, also hits gene MID1 522/523
(99 %)
0 diff
(100 %id)
AI636158 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1525 to 2042 519 to 1       519/519
(100 %)
1 diff
(99.9 %id)
BQ023235 placenta .b 1537 to 2042 522 to 17   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 506/506
(100 %)
0 diff
(100 %id)
AI492309 Kidney .b 1551 to 2060 510 to 1       510/510
(100 %)
0 diff
(100 %id)
BM717957 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1557 to 1776 1 to 220   fully sequenced, Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 220/220
(100 %)
1 diff
(99.6 %id)
AA993513   .b 1580 to 2048 487 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 469/469
(100 %)
0 diff
(100 %id)
AW073513 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .b 1587 to 2042 456 to 1       456/456
(100 %)
0 diff
(100 %id)
BX105917 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1595 to 2042 462 to 15   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 448/448
(100 %)
0 diff
(100 %id)
BM919766 pooled pancreas and spleen .b 1595 to 2160 19 to 585       567/959
(59 %)
15 diff
(98.5 %id)
BP230309 brain .b 1609 to 2190 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA865889 Prostate .b 1645 to 2207 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AW197413 pooled germ cell tumors .b 1657 to 1979 323 to 1       323/323
(100 %)
0 diff
(100 %id)
BF446145 Prostate .b 1668 to 2049 384 to 3       382/384
(99 %)
0 diff
(100 %id)
AA182557 brain, neuroepithelial cells .b 1732 to 2044 322 to 7       316/324
(97 %)
0 diff
(100 %id)
AI202172 Prostate .b 1742 to 2044 327 to 25       303/327
(92 %)
0 diff
(100 %id)
BU742166 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1746 to 2042 308 to 12   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 297/297
(100 %)
1 diff
(99.7 %id)
CN351535 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1788 to 2153 1 to 366       366/366
(100 %)
0 diff
(100 %id)
CN351533 embryonic stem cells, cell lines H1, H7, andH9 .b 1800 to 2398 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
BE763351 nervous_tumor .b 1845 to 2363 526 to 9       518/531
(97 %)
0 diff
(100 %id)
CB046319 2 pooled tumors (clear cell type), Kidney .b 1900 to 2292 3 to 395   fully sequenced, Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 393/395
(99 %)
5 diff
(98.8 %id)
CB046318 2 pooled tumors (clear cell type), Kidney .b 2262 to 2474 251 to 39   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 213/213
(100 %)
2 diff
(99.1 %id)
DB363967   .b 2933 to 3359 430 to 1       430/434
(99 %)
16 diff
(96.4 %id)
DB206588 trachea .c 1 to 573 2 to 574   tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
DB227259 trachea .c 1 to 575 2 to 577   capped   576/578
(99 %)
4 diff
(99.4 %id)
DA541237 lung .c 45 to 631 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DB349778 trachea .c 3180 to 3537 359 to 1   tiling clone,   359/359
(100 %)
1 diff
(99.8 %id)
NM_001130032.1   .d 1 to 5705 2 to 5706 exact RefSeq, AAA Possibly primed on the genome, locally A rich (30/33 A in genome downstream of last aligned base) 5706/5706
(100 %)
0 diff
(100 %id)
DC403290 testis .d 14 to 586 1 to 574   tiling clone,   574/574
(100 %)
2 diff
(99.7 %id)
BX474044   .d 19 to 510 1 to 492       492/493
(99 %)
1 diff
(99.8 %id)
BX473894   .d 43 to 638 1 to 599       599/599
(100 %)
4 diff
(99.4 %id)
CN427070 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 55 to 711 9 to 668       660/672
(98 %)
10 diff
(98.6 %id)
AY346375   .d 163 to 1443 1 to 1281 C237Y V305I tiling clone,   1281/1281
(100 %)
2 diff
(99.9 %id)
BE559881 Burkitt lymphoma, lymph .d 294 to 1043 1 to 753       753/786
(95 %)
16 diff
(98.0 %id)
TI_149287340   .d 433 to 1215 881 to 101   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 781/1255
(62 %)
4 diff
(99.7 %id)
TI_149287413   .d 433 to 1215 856 to 79   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 778/1152
(67 %)
4 diff
(99.7 %id)
BE091122 breast .d 441 to 676 268 to 43     Submitted on the opposite strand 226/281
(80 %)
0 diff
(100 %id)
BM972735 lung .d 544 to 1215 685 to 14   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 672/685
(98 %)
0 diff
(100 %id)
BM972677 lung .d 596 to 1215 633 to 14   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 620/633
(97 %)
0 diff
(100 %id)
BU622568 cell lines, Chondrosarcoma .d 597 to 1206 621 to 13   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 609/621
(98 %)
0 diff
(100 %id)
AW969266   .d 657 to 1203 547 to 1     Submitted on the opposite strand 547/547
(100 %)
3 diff
(99.5 %id)
AA468767 colon .d 765 to 1206 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AA468747 colon .d 817 to 1206 390 to 1       390/390
(100 %)
0 diff
(100 %id)
TI_151729698   .d 885 to 1775 962 to 78   AAA   885/972
(91 %)
19 diff
(98.1 %id)
CU443960 epidermis .d 964 to 1749 790 to 5     Submitted on the opposite strand 786/790
(99 %)
0 diff
(100 %id)
TI_149289001   .d 968 to 1775 887 to 99   tiling clone, AAA   789/795
(99 %)
62 diff
(92.3 %id)
CK299087 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1005 to 1775 789 to 19   AAA   771/771
(100 %)
2 diff
(99.8 %id)
TI_149278585   .d 1086 to 1775 831 to 143   AAA   689/699
(98 %)
24 diff
(96.6 %id)
BM970703 lung .d 1192 to 1775 600 to 17   AAA   584/584
(100 %)
0 diff
(100 %id)
AA632636 thyroid .d 1247 to 1633 453 to 68       386/453
(85 %)
0 diff
(100 %id)
BU533869 mixed (pool of 40 RNAs) .d 1247 to 1773 1 to 527       527/528
(99 %)
2 diff
(99.7 %id)
BE858098 brain, glioblastoma (pooled) .d 1266 to 1770 505 to 1       505/505
(100 %)
0 diff
(100 %id)
AI014809   .d 1288 to 1777 494 to 6       489/494
(98 %)
0 diff
(100 %id)
BF858002 prostate_tumor .d 1327 to 1759 14 to 446       433/446
(97 %)
6 diff
(98.7 %id)
AI660344 thymus, pooled .d 1359 to 1775 430 to 14   AAA   417/417
(100 %)
0 diff
(100 %id)
AW013903   .d 1379 to 1775 414 to 18   AAA   397/412
(96 %)
0 diff
(100 %id)
AW002614 pooled germ cell tumors .d 1388 to 1775 387 to 1       387/387
(100 %)
1 diff
(99.8 %id)
AI919165 pooled germ cell tumors .d 1411 to 1775 365 to 1       365/365
(100 %)
0 diff
(100 %id)
AI655988 pooled germ cell tumors .d 1414 to 1775 362 to 1       362/362
(100 %)
0 diff
(100 %id)
AI655255 pooled germ cell tumors .d 1414 to 1775 362 to 1       362/362
(100 %)
0 diff
(100 %id)
BE463851 pooled germ cell tumors .d 1415 to 1775 361 to 1       361/361
(100 %)
2 diff
(99.5 %id)
AI657016 pooled germ cell tumors .d 1420 to 1776 357 to 1       357/363
(98 %)
0 diff
(100 %id)
AI001007 breast .d 1473 to 1775 303 to 1       303/303
(100 %)
0 diff
(100 %id)
AA224581 brain, neuroepithelial cells .d 1559 to 1777 225 to 7       219/225
(97 %)
0 diff
(100 %id)
AW874510 tumor, uterus .d 1625 to 2033 1 to 409     Submitted on the opposite strand 409/409
(100 %)
4 diff
(99.1 %id)
BQ340923 nervous_normal .d 1629 to 1955 1 to 324       324/326
(99 %)
9 diff
(97.3 %id)
DA230044 brain .d 1756 to 2293 2 to 539   tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
R73279 breast .d 1923 to 2301 1 to 384       384/463
(82 %)
8 diff
(98.3 %id)
BF817583 colon_ins .d 1964 to 2481 1 to 518       518/518
(100 %)
12 diff
(97.7 %id)
AA868213   .d 2264 to 2594 460 to 130   tiling clone,   331/460
(71 %)
0 diff
(100 %id)
T82251 liver and spleen .d 2470 to 2822 354 to 1   tiling clone, Submitted on the opposite strand 354/357
(99 %)
3 diff
(99.2 %id)
T80658 liver and spleen .d 2502 to 2822 325 to 1   tiling clone, Submitted on the opposite strand 325/339
(95 %)
6 diff
(98.3 %id)
BF926294 nervous_tumor .d 2872 to 3087 1 to 215   tiling clone,   215/215
(100 %)
7 diff
(96.8 %id)
BF927477 nervous_tumor .d 2879 to 3087 1 to 209   tiling clone,   209/209
(100 %)
1 diff
(99.6 %id)
DA733068   .d 3181 to 3804 2 to 623   tiling clone, capped   622/622
(100 %)
3 diff
(99.6 %id)
BP221475 colon .d 3413 to 3973 1 to 561   tiling clone,   561/561
(100 %)
8 diff
(98.6 %id)
BG105096 adrenal cortex carcinoma, cell line, adrenal gland .d 3598 to 4286 1 to 682       682/916
(74 %)
24 diff
(97.4 %id)
BI598040 brain, hypothalamus .d 3713 to 4601 1 to 887       887/888
(99 %)
45 diff
(95.0 %id)
BI603071 brain, hypothalamus .d 3713 to 4494 1 to 786       786/787
(99 %)
22 diff
(97.3 %id)
TI_45215825   .d 3717 to 4494 89 to 870       782/871
(89 %)
20 diff
(97.8 %id)
TI_45213303   .d 3718 to 4601 130 to 1011       882/1012
(87 %)
42 diff
(95.9 %id)
BP293982 lung .d 3728 to 4309 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB145927 thymus .d 3734 to 4280 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA538106 Kidney .d 3738 to 4331 2 to 595   tiling clone, capped   594/594
(100 %)
0 diff
(100 %id)
DA383440 thalamus .d 3742 to 4319 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
AL599094   .d 3749 to 4103 1 to 353       353/353
(100 %)
2 diff
(99.5 %id)
BQ027553 mixed .d 3886 to 4373 504 to 19   AAA   486/486
(100 %)
1 diff
(99.8 %id)
BG109200 Bone, osteosarcoma, cell line .d 4105 to 4561 1 to 457   tiling clone,   457/458
(99 %)
1 diff
(99.8 %id)
BF843250 head_neck .d 4192 to 4402 15 to 224       210/224
(93 %)
6 diff
(97.4 %id)
BF843251 head_neck .d 4192 to 4402 17 to 226       210/226
(92 %)
6 diff
(97.4 %id)
BE068939 breast .d 4242 to 4733 1 to 493       493/493
(100 %)
7 diff
(98.6 %id)
FN078416 breast carcinoma .d 4313 to 4423 1 to 115       115/117
(98 %)
4 diff
(96.6 %id)
DB311655 thalamus .d 4433 to 4976 1 to 545     Submitted on the opposite strand 545/545
(100 %)
1 diff
(99.9 %id)
CF138769 CNCAP(3)T-225 cell line, Prostate .d 4539 to 4982 1 to 444       444/444
(100 %)
4 diff
(99.1 %id)
TI_154168846   .d 4544 to 5051 78 to 585   tiling clone,   508/508
(100 %)
0 diff
(100 %id)
BG495988 lung, mucoepidermoid carcinoma .d 4610 to 5254 1 to 649       649/1038
(62 %)
17 diff
(98.4 %id)
BM542189 melanotic melanoma, skin .d 4675 to 5523 13 to 869       857/974
(87 %)
29 diff
(97.1 %id)
CR741353 liver and spleen .d 4699 to 5498 1 to 799   tiling clone,   799/799
(100 %)
4 diff
(99.5 %id)
R99679 liver and spleen .d 4699 to 5094 1 to 398       398/415
(95 %)
4 diff
(99.1 %id)
BQ371039 prostate_normal .d 4857 to 5209 1 to 351       351/363
(96 %)
5 diff
(98.7 %id)
BG531962 embryonal carcinoma, testis .d 4913 to 5606 1 to 689       689/754
(91 %)
13 diff
(98.3 %id)
DB364822   .d 5033 to 5608 574 to 1       574/579
(99 %)
31 diff
(94.7 %id)
T63417 lung .d 5164 to 5695 545 to 9       537/545
(98 %)
0 diff
(100 %id)
R99573 liver and spleen .d 5224 to 5706 485 to 2       484/487
(99 %)
0 diff
(100 %id)
AI276029 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 5234 to 5705 472 to 1       472/472
(100 %)
1 diff
(99.8 %id)
N52383 liver and spleen .d 5256 to 5719 467 to 1       467/469
(99 %)
7 diff
(98.6 %id)
AI753280 bone marrow stroma .d 5272 to 5728 476 to 20   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 457/457
(100 %)
0 diff
(100 %id)
AA702537 liver and spleen .d 5278 to 5705 429 to 1       429/429
(100 %)
44 diff
(89.8 %id)
BP242973 Liver .d 5288 to 5856 1 to 569   tiling clone,   569/569
(100 %)
7 diff
(98.8 %id)
AI168801 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 5291 to 5706 415 to 1       415/415
(100 %)
2 diff
(99.6 %id)
AA599673   .d 5326 to 5705 379 to 1       379/379
(100 %)
2 diff
(99.5 %id)
AW002691 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 5331 to 5723 393 to 1       393/393
(100 %)
0 diff
(100 %id)
AI458578 carcinoid, lung .d 5340 to 5728 389 to 1       389/389
(100 %)
3 diff
(99.3 %id)
AW002696 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 5341 to 5723 383 to 1       383/383
(100 %)
0 diff
(100 %id)
AA906706 carcinoid, lung .d 5402 to 5708 307 to 1       307/307
(100 %)
0 diff
(100 %id)
BG167786 hypernephroma, cell line, Kidney .d 5413 to 5705 31 to 323   AAA Possibly primed on the genome, locally A rich (30/33 A in genome downstream of last aligned base) 293/323
(90 %)
6 diff
(98.2 %id)
AA350643 brain .d 5432 to 5705 274 to 1       274/274
(100 %)
1 diff
(99.7 %id)
C01104   .d 5525 to 5705 1 to 181       181/181
(100 %)
0 diff
(100 %id)
BE043929 lymph node, lymphoma, follicular mixed small and largecell .d 5655 to 6090 436 to 1       436/436
(100 %)
1 diff
(99.8 %id)
AW262262 lung, two pooled squamous cell carcinomas .d 5656 to 6093 438 to 1   tiling clone,   438/438
(100 %)
0 diff
(100 %id)
CD699783 normal nasopharynx .e 1 to 237 23 to 259       245/259
(94 %)
6 diff
(97.7 %id)
BP221824   .e 1 to 580 2 to 581       581/581
(100 %)
0 diff
(100 %id)
NM_001130031.1   .e 1 to 5758 2 to 5759 exact RefSeq, AAA Possibly primed on the genome, locally A rich (30/33 A in genome downstream of last aligned base) 5759/5759
(100 %)
0 diff
(100 %id)
BP351030   .e 1 to 581 2 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DC375480 brain .e 16 to 459 1 to 444       444/444
(100 %)
0 diff
(100 %id)
DC405554 thymus .e 16 to 603 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC315968 amygdala .e 27 to 580 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
BP237590 Liver .e 40 to 654 1 to 615       615/615
(100 %)
1 diff
(99.9 %id)
BX446351 placenta .e 56 to 1144 1 to 1068   fully sequenced,   1068/1068
(100 %)
27 diff
(97.5 %id)
CR613353 placenta .e 56 to 1820 1 to 1765 exact     1765/1765
(100 %)
0 diff
(100 %id)
DC297728   .e 60 to 635 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
BC109062 PCR rescued clones .e 110 to 2166 1 to 2057 exact tiling clone,   2057/2057
(100 %)
0 diff
(100 %id)
BX433502 placenta .e 1120 to 1809 701 to 12   fully sequenced,   690/701
(98 %)
0 diff
(100 %id)
AK297446 brain .f 1 to 1714 1 to 1714 K182E I312V tiling clone,   1714/1714
(100 %)
4 diff
(99.8 %id)
DC351976 brain .f 1 to 581 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BP337413 coronary artery .f 28 to 608 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
AI570563 anaplastic oligodendroglioma, brain .f 1196 to 1820 619 to 1   tiling clone,   619/899
(68 %)
14 diff
(98.5 %id)
AK122974 uterus .g 1 to 4413 1 to 4409 G55R E56G V57L F58Q R59G ... tiling clone, available from FLJ,   4409/4409
(100 %)
4 diff
(100.0 %id)
DB276279 uterus .g 2 to 558 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
BP335914 coronary artery .g 1590 to 2182 1 to 596       596/596
(100 %)
5 diff
(99.2 %id)
BP237069 coronary artery .g 1592 to 2173 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA736429   .g 1596 to 2427 2 to 831   capped   830/830
(100 %)
5 diff
(99.4 %id)
AW466918 2 pooled tumors (clear cell type), Kidney .g 1600 to 2127 528 to 2       527/528
(99 %)
0 diff
(100 %id)
AL703196 human skeletal muscle .g 1623 to 2051 1 to 430       430/430
(100 %)
2 diff
(99.6 %id)
BE672012 pooled germ cell tumors .g 1785 to 2074 291 to 2       355/424
(83 %)
5 diff
(98.9 %id)
BP306292   .g 1828 to 2398 1 to 568       568/570
(99 %)
21 diff
(96.4 %id)
FN173353 breast carcinoma .g 1869 to 1976 107 to 1     Submitted on the opposite strand 107/107
(100 %)
2 diff
(98.2 %id)
BM819507 stomach .g 1919 to 2549 1 to 629       629/629
(100 %)
2 diff
(99.7 %id)
BM849341 stomach .g 1920 to 2580 1 to 661       661/661
(100 %)
3 diff
(99.6 %id)
BM851961 stomach .g 1920 to 2412 1 to 493       493/493
(100 %)
1 diff
(99.8 %id)
CV358353 amnion_normal .g 1982 to 2259 1 to 278       278/283
(98 %)
3 diff
(99.0 %id)
BP293300 lung .g 2032 to 2613 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BE072341 breast .g 2071 to 2524 467 to 12     Submitted on the opposite strand 456/485
(94 %)
0 diff
(100 %id)
CF145814 CNCAP(3)T-225 cell line, Prostate .g 2116 to 2823 1 to 707       707/707
(100 %)
6 diff
(99.2 %id)
CF145824 CNCAP(3)T-225 cell line, Prostate .g 2116 to 2841 1 to 725       725/732
(99 %)
6 diff
(99.2 %id)
TI_154178097   .g 2123 to 2981 70 to 915       846/900
(94 %)
23 diff
(97.5 %id)
TI_154178109   .g 2123 to 2958 70 to 894       825/914
(90 %)
17 diff
(98.2 %id)
BY994942   .g 2158 to 2836 10 to 688       679/688
(98 %)
6 diff
(99.2 %id)
CN351536 embryonic stem cells, DMSO-treated H9 cellline .g 2177 to 2475 1 to 299       299/299
(100 %)
0 diff
(100 %id)
CN351534 embryonic stem cells, cell lines H1, H7, andH9 .g 2193 to 2834 1 to 641       641/641
(100 %)
3 diff
(99.6 %id)
CX873572 embryonic stem .g 2337 to 3107 1 to 770   tiling clone,   770/770
(100 %)
1 diff
(99.9 %id)
BP293313 lung .g 2436 to 3022 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
BP227559   .g 2511 to 2916 1 to 406       406/571
(71 %)
15 diff
(97.4 %id)
BP226449   .g 2543 to 3125 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BU070403 insulinoma, Pancreas .g 2710 to 3280 571 to 1       571/571
(100 %)
0 diff
(100 %id)
AI333411 lung .g 2797 to 3290 499 to 6       494/499
(98 %)
0 diff
(100 %id)
CN351538 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 2923 to 3435 7 to 519       513/522
(98 %)
1 diff
(99.9 %id)
R72733 breast .g 2959 to 3288 1 to 331       331/334
(99 %)
3 diff
(99.2 %id)
AI523399 aorta .g 3037 to 3281 245 to 1       245/289
(84 %)
5 diff
(98.3 %id)
CV811589 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .g 3103 to 3947 1 to 851       851/890
(95 %)
34 diff
(96.2 %id)
AV749947 Pituitary .g 3167 to 3418 250 to 1     Submitted on the opposite strand 250/250
(100 %)
5 diff
(98.0 %id)
CF140222 CNCAP(3)T-225 cell line, Prostate .g 3229 to 3759 8 to 538       531/538
(98 %)
6 diff
(98.9 %id)
TI_154170592   .g 3229 to 3830 80 to 683       604/997
(60 %)
7 diff
(99.3 %id)
BG613608 embryonal carcinoma, testis .g 3582 to 4410 1 to 828       828/850
(97 %)
12 diff
(98.6 %id)
TI_154124627   .g 3609 to 4413 882 to 88   AAA   795/862
(92 %)
18 diff
(98.0 %id)
AL135342 melanoma (MeWo cell line) .g 3638 to 4413 1 to 776   AAA   776/776
(100 %)
1 diff
(99.9 %id)
BG939396 bone marrow stroma .g 3638 to 4321 702 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 684/684
(100 %)
0 diff
(100 %id)
AL135338 melanoma (MeWo cell line) .g 3640 to 4410 1 to 766   AAA   766/768
(99 %)
11 diff
(98.6 %id)
CA415776 Chondrosarcoma Cell line .g 3733 to 4413 699 to 19   AAA   681/681
(100 %)
0 diff
(100 %id)
N28500 melanocyte .g 3748 to 4038 1 to 297   fully sequenced,   297/297
(100 %)
8 diff
(97.4 %id)
AI984021 adenocarcinoma, Pancreas .g 3755 to 4321 567 to 1       567/567
(100 %)
0 diff
(100 %id)
TI_154132383   .g 3868 to 4413 613 to 58   AAA   556/954
(58 %)
24 diff
(97.5 %id)
DB352193 uterus .g 3870 to 4413 542 to 1       542/542
(100 %)
1 diff
(99.9 %id)
CA436025 lung, Metastatic Chondrosarcoma .g 3909 to 4418 528 to 19   AAA   510/510
(100 %)
3 diff
(99.5 %id)
AW904433 nervous_normal .g 3937 to 4354 1 to 418       418/418
(100 %)
4 diff
(99.1 %id)
BF964309 nervous_normal .g 3940 to 4354 30 to 444       415/444
(93 %)
6 diff
(98.7 %id)
AA343320 Liver .g 3966 to 4227 1 to 262       262/262
(100 %)
3 diff
(98.9 %id)
BE813407 breast_normal .g 3978 to 4318 341 to 4       338/341
(99 %)
0 diff
(100 %id)
AI682468 Prostate .g 3983 to 4414 432 to 1   tiling clone,   432/432
(100 %)
0 diff
(100 %id)
H99774 melanocyte .g 4009 to 4413 406 to 1   fully sequenced,   406/406
(100 %)
1 diff
(99.8 %id)
AW087983 esophagus, squamous cell carcinoma .g 4016 to 4416 404 to 4       401/404
(99 %)
0 diff
(100 %id)
AA911190 Kidney .g 4068 to 4414 348 to 2       347/348
(99 %)
0 diff
(100 %id)
AA923049 Kidney .g 4085 to 4414 330 to 1       330/330
(100 %)
4 diff
(98.8 %id)
AW269257 Kidney .g 4105 to 4414 310 to 1       310/310
(100 %)
5 diff
(98.4 %id)
AI804789 Prostate .g 4109 to 4419 311 to 1   tiling clone,   311/311
(100 %)
0 diff
(100 %id)
BF964311 nervous_normal .g 4203 to 4362 161 to 2       160/161
(99 %)
0 diff
(100 %id)
AK304370 trachea .h 1 to 1437 2 to 1438 exact tiling clone,   1438/1438
(100 %)
0 diff
(100 %id)
DC418364 trachea .h 1 to 588 2 to 589       589/589
(100 %)
0 diff
(100 %id)
AK303038 testis .i 1 to 1764 2 to 1766 exact tiling clone,   1766/1766
(100 %)
1 diff
(100.0 %id)
DC404389 testis .i 1 to 584 2 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DC352628 brain .i 28 to 585 1 to 559   tiling clone,   559/559
(100 %)
1 diff
(99.9 %id)
NM_017656.3   .j 1 to 5542 2 to 5543 exact RefSeq, AAA Possibly primed on the genome, locally A rich (30/33 A in genome downstream of last aligned base) 5543/5543
(100 %)
0 diff
(100 %id)
AK000086 colon .j 42 to 5555 1 to 5513 F106L K133E K307R tiling clone, available from FLJ, AAA   5513/5518
(99 %)
14 diff
(99.8 %id)
BP220486 colon .j 42 to 611 1 to 571   tiling clone,   571/572
(99 %)
4 diff
(99.4 %id)
CN427069 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .j 54 to 308 1 to 255   tiling clone,   255/255
(100 %)
2 diff
(99.3 %id)
AK300115 placenta .k 1 to 1475 1 to 1475 A30V tiling clone,   1475/1475
(100 %)
2 diff
(99.9 %id)
DA829840 placenta .k 2 to 737 2 to 741   capped   740/744
(99 %)
8 diff
(99.0 %id)
BE090935 breast .k 348 to 628 284 to 3   tiling clone, Submitted on the opposite strand 282/297
(94 %)
1 diff
(99.7 %id)
DB374779 placenta .k 1098 to 1682 584 to 1   tiling clone,   584/584
(100 %)
32 diff
(94.6 %id)
BX645170   .l 1 to 562 1 to 563   tiling clone,   563/563
(100 %)
3 diff
(99.5 %id)
DA799936 brain .l 188 to 641 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DA065396 cerebellum .l 202 to 562 2 to 362   capped   361/361
(100 %)
0 diff
(100 %id)
DA685325   .l 204 to 772 2 to 573 R16L Q17A R18K K19E D20G ... capped   572/572
(100 %)
4 diff
(99.4 %id)
DC350325 brain .l 230 to 810 1 to 581 exact tiling clone,   586/586
(100 %)
0 diff
(100 %id)
DC336685 substantia nigra .l 239 to 806 1 to 568 exact     568/568
(100 %)
0 diff
(100 %id)
BX503063 Liver .m 1 to 495 1 to 495 exact tiling clone,   495/495
(100 %)
1 diff
(99.8 %id)
CN351539 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .m 346 to 967 9 to 631   tiling clone,   623/631
(98 %)
1 diff
(99.9 %id)
CN351540 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .n 1 to 343 10 to 350 F2C L4V S8P R9G E10T ... tiling clone,   341/350
(97 %)
6 diff
(98.3 %id)
BF593259 Kidney .o 1 to 317 329 to 13   tiling clone,   317/329
(96 %)
0 diff
(100 %id)
AL708064 human skeletal muscle .o 211 to 788 9 to 585   tiling clone,   577/585
(98 %)
6 diff
(99.0 %id)
DB054962 testis .o 629 to 1195 2 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
BM509700 Pancreas, Purified pancreatic islet .p 1 to 440 1 to 440   tiling clone,   440/440
(100 %)
1 diff
(99.8 %id)
CK822583 Pancreas, Purified pancreatic islet .p 31 to 462 1 to 432 exact tiling clone, Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
BM550500 melanotic melanoma, skin .q 1 to 738 6 to 745 exact tiling clone,   740/1124
(65 %)
13 diff
(98.9 %id)
BX332481 Neuroblastoma Cot 25-normalized .r 1 to 1061 1 to 1054 exact tiling clone,   1054/1054
(100 %)
10 diff
(99.1 %id)
DA954765 Spleen .r 16 to 566 2 to 552 W55* capped   551/551
(100 %)
1 diff
(99.9 %id)
BP313245 mammary gland .r 20 to 602 1 to 583 exact     583/583
(100 %)
1 diff
(99.9 %id)
DN999826   .r 28 to 579 9 to 560 exact     552/560
(98 %)
6 diff
(99.0 %id)
DB248789 uterus .r 28 to 588 2 to 562 exact capped   561/561
(100 %)
2 diff
(99.7 %id)
AK304383 trachea .s 1 to 2017 1 to 2017 exact tiling clone,   2017/2017
(100 %)
1 diff
(100.0 %id)
DB237093 trachea .s 2 to 553 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DA687488   .t 1 to 541 2 to 544   capped   543/546
(99 %)
4 diff
(99.3 %id)
DA985251 synovial membrane tissue from rheumatioidarthritis .t 1 to 538 2 to 539   tiling clone, capped   538/538
(100 %)
1 diff
(99.9 %id)
DA064501 cerebellum .t 3 to 558 2 to 558   capped   557/562
(99 %)
1 diff
(99.9 %id)
DA468437   .t 3 to 557 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA857369 placenta .t 3 to 562 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA409367 thalamus .t 7 to 569 8 to 570 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DA432395 colon .t 24 to 557 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
AL710387 human skeletal muscle .t 28 to 439 1 to 412       412/412
(100 %)
3 diff
(99.3 %id)
AL710402 human skeletal muscle .t 28 to 471 1 to 444       444/444
(100 %)
3 diff
(99.4 %id)
DA319627 hippocampus .t 30 to 551 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
BF805580 colon_ins .t 71 to 447 376 to 1     Submitted on the opposite strand 376/376
(100 %)
1 diff
(99.8 %id)
BF805752 colon_ins .t 71 to 453 389 to 9     Submitted on the opposite strand 381/389
(97 %)
0 diff
(100 %id)
DA244208 brain .u 1 to 581 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
CB961967 placenta, pre-eclamptic placenta .va 1 to 705 27 to 737 exact tiling clone,   714/757
(94 %)
12 diff
(98.5 %id)
AA248298   .va 483 to 880 1 to 399   tiling clone,   399/399
(100 %)
1 diff
(99.8 %id)
AW263045 Kidney .va 627 to 1142 516 to 1   tiling clone,   516/516
(100 %)
2 diff
(99.7 %id)
AI358019 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .va 780 to 1074 309 to 15   AAA   295/295
(100 %)
0 diff
(100 %id)
AI382730 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .va 830 to 1136 308 to 1   tiling clone,   308/308
(100 %)
1 diff
(99.7 %id)
BX102846 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .va 929 to 1088 160 to 1     Submitted on the opposite strand 160/168
(95 %)
2 diff
(98.9 %id)
DA436425 tongue, tumor tissue .va 1127 to 1704 2 to 580   tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
BP276699 Kidney .vb 1 to 482 1 to 482   tiling clone,   482/582
(82 %)
16 diff
(97.3 %id)
BQ641505 eye, normal pigmented retinal epithelium .vb 46 to 946 1 to 909 Q126P C130M K131* tiling clone,   909/924
(98 %)
14 diff
(98.5 %id)
CB410812 cochlea, ear .vc-u 1 to 586 587 to 1 F11V C12L H13P V14C G15W ... tiling clone,   587/587
(100 %)
1 diff
(99.9 %id)
AI580903   .vc-u 9 to 483 1 to 475   tiling clone, Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
AA513771 breast .vc-u 13 to 317 1 to 305     Submitted on the opposite strand 305/305
(100 %)
0 diff
(100 %id)
BQ301014 bladder_tumor .vc-u 210 to 652 1 to 443   tiling clone,   443/443
(100 %)
0 diff
(100 %id)
BF910460 uterus_tumor .vc-u 320 to 620 1 to 301       301/301
(100 %)
3 diff
(99.1 %id)
BQ359099 head_neck .vc-u 339 to 595 18 to 274       257/275
(93 %)
3 diff
(99.0 %id)
AA249803   .vc-u 446 to 698 244 to 1   tiling clone, Submitted on the opposite strand 244/280
(87 %)
17 diff
(94.0 %id)
DA469654   .vd 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
CN351537 embryonic stem cells, cell lines H1, H7, andH9 .vd 24 to 667 1 to 644 exact tiling clone,   644/644
(100 %)
2 diff
(99.7 %id)
CA395508 eye, RPE/choroid .vd 28 to 624 1 to 597       597/597
(100 %)
0 diff
(100 %id)
DC301462   .ve 1 to 573 1 to 573   tiling clone,   573/573
(100 %)
1 diff
(99.9 %id)
G36798   .ve 43 to 469 67 to 495       429/495
(86 %)
8 diff
(98.4 %id)
N92853 lung .ve 43 to 469 67 to 495     Submitted on the opposite strand 429/495
(86 %)
8 diff
(98.4 %id)
AW664666 pooled .ve 43 to 511 66 to 534   tiling clone, Submitted on the opposite strand 469/534
(87 %)
6 diff
(98.9 %id)
W25558 lung .ve 217 to 634 432 to 2 P64S R65D G66W tiling clone, Submitted on the opposite strand 431/432
(99 %)
13 diff
(97.0 %id)
BP230227 brain .vf 1 to 582 1 to 582 exact tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
BP347397 brain .vf 1 to 594 1 to 596 exact     596/597
(99 %)
9 diff
(98.5 %id)
BP347380 brain .vf 2 to 600 1 to 598 exact     598/598
(100 %)
13 diff
(97.9 %id)
BP244579 Kidney .vf 28 to 625 1 to 598 exact tiling clone,   598/598
(100 %)
0 diff
(100 %id)
BF676709 Prostate .vg 1 to 626 1 to 629 exact tiling clone,   629/879
(71 %)
21 diff
(97.7 %id)
DA333230 hippocampus .vh 1 to 594 2 to 595 exact tiling clone, capped   594/594
(100 %)
1 diff
(99.9 %id)
CN351541 embryonic stem cells, cell lines H1, H7, andH9 .vh 22 to 557 13 to 548 exact     536/548
(97 %)
6 diff
(99.0 %id)
DB275936 uterus .vh 27 to 577 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DB046651 testis .vi 1 to 560 2 to 561 L20P tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DB236402 trachea .vi 1 to 488 2 to 489 L20P capped   488/488
(100 %)
1 diff
(99.8 %id)
DB278663 uterus .vi 26 to 559 2 to 535   tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
ES308290 beard hair, skin .vi 100 to 349 1 to 250       250/250
(100 %)
0 diff
(100 %id)
DB282438 uterus .vj 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DB249756 uterus .vk 1 to 540 2 to 541 exact tiling clone, capped   540/540
(100 %)
1 diff
(99.9 %id)
AA476777   .vl 1 to 326 14 to 339 exact tiling clone,   326/339
(96 %)
6 diff
(98.3 %id)
AW137026   .vm-u 1 to 297 312 to 16 A5H F11S F23L I24T F40P ... AAA   297/297
(100 %)
0 diff
(100 %id)
BX332480 Neuroblastoma Cot 25-normalized Gene ZNF562andZNF561, variant not shown         This clone was ignored    
AV725819 hypothalamus Gene ZNF562andZNF561, variant not shown         Suspected internal deletion, this clone was ignored    
BF924136 nervous_tumor Gene ZNF562andZNF561, variant not shown         This clone was ignored    
BI032904 nervous_normal Gene ZNF562andZNF561, variant not shown         This clone was ignored    
AW959954   Gene ZNF562andZNF561, variant not shown         This clone was ignored    
AW812565 stomach Gene ZNF562andZNF561, variant not shown         This clone was ignored    
BX100670 melanocyte Gene ZNF562andZNF561, variant not shown         This clone was ignored    
AA172097   Gene ZNF562andZNF561, variant not shown       fully sequenced, This clone was ignored    
AA172247   Gene ZNF562andZNF561, variant not shown       fully sequenced, This clone was ignored    
AI625028 pooled germ cell tumors Gene ZNF562andZNF561, variant not shown         Suspected internal deletion, this clone was ignored    
BF115515 brain, glioblastoma (pooled) Gene ZNF562andZNF561, variant not shown         Suspected internal deletion, this clone was ignored    
BM040722.
matches multiple genes
Kidney, Wilms' tumor, cell line Gene ZNF562andZNF561, variant not shown         This clone was ignored, also hits gene fluzoy, plawpu    
BM040722.
matches multiple genes
Kidney, Wilms' tumor, cell line Gene plawpu, variant not shown         This clone was ignored, also hits gene fluzoy, plawpu    
BM040722.
matches multiple genes
Kidney, Wilms' tumor, cell line Gene fluzoy, variant not shown         This clone was ignored, also hits gene fluzoy, plawpu    
BM041479.
matches multiple genes
Kidney, Wilms' tumor, cell line Gene ZNF562andZNF561, variant not shown         This clone was ignored, also hits gene fluzoy, plawpu    
BM041479.
matches multiple genes
Kidney, Wilms' tumor, cell line Gene plawpu, variant not shown         This clone was ignored, also hits gene fluzoy, plawpu    
BM041479.
matches multiple genes
Kidney, Wilms' tumor, cell line Gene fluzoy, variant not shown         This clone was ignored, also hits gene fluzoy, plawpu    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc-u, .vd, .ve, .vf, .vg, .vh, .vi, .vj, .vk, .vl, .vm-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C