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Gene ZNF516TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
212 supporting clones for gene ZNF516 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
D86975 bone marrow .a 1 to 6034 1 to 6033 R1038V P1039L T1040H L1041S H1042I ... tiling clone, available from KIAA,   6033/6033
(100 %)
9 diff
(99.9 %id)
NM_014643.3   .a 1 to 8627 1 to 8626 R1038V P1039L T1040H L1041S H1042I ... RefSeq,   8626/8626
(100 %)
1 diff
(100.0 %id)
DB459045 testis .a 766 to 1239 1 to 474       474/474
(100 %)
0 diff
(100 %id)
DB460020 testis .a 766 to 1223 1 to 458       458/458
(100 %)
0 diff
(100 %id)
BE779070 eye, retinoblastoma .a 1368 to 2125 1 to 762   tiling clone,   762/847
(89 %)
39 diff
(95.4 %id)
BU175549 large cell carcinoma, lung .a 2119 to 2847 15 to 752       738/929
(79 %)
6 diff
(99.4 %id)
BE780961 eye, retinoblastoma .a 2167 to 2962 1 to 790       790/882
(89 %)
17 diff
(98.1 %id)
BU176408 eye, retinoblastoma .a 2359 to 3215 1 to 869       869/935
(92 %)
39 diff
(95.9 %id)
AL044598 testis .a 2373 to 2914 1 to 540       540/540
(100 %)
4 diff
(99.3 %id)
BU159163 eye, retinoblastoma .a 2482 to 3302 13 to 845   tiling clone,   833/899
(92 %)
22 diff
(97.6 %id)
BU192719 eye, retinoblastoma .a 2529 to 3302 1 to 783       783/891
(87 %)
16 diff
(98.3 %id)
BM470543 eye, retinoblastoma .a 3187 to 3690 33 to 535       503/1362
(36 %)
11 diff
(99.2 %id)
BM695206 eye, optic nerve .a 3389 to 4033 1 to 647   tiling clone, fully sequenced, AAA   647/647
(100 %)
7 diff
(99.0 %id)
AA644517 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3477 to 3881 1 to 404       404/404
(100 %)
8 diff
(98.1 %id)
AI093470 uterus .a 3485 to 4033 549 to 1       549/549
(100 %)
0 diff
(100 %id)
AI214820   .a 3485 to 4035 562 to 21   AAA   542/636
(85 %)
17 diff
(97.4 %id)
BM471671 eye, retinoblastoma .a 3520 to 4420 13 to 927       915/1079
(84 %)
35 diff
(96.8 %id)
AI673639 colon, colonic mucosa from 3 patients with Crohn'sdisease .a 3523 to 3988 466 to 2       465/477
(97 %)
6 diff
(98.8 %id)
DB527431 testis .a 3566 to 4035 1 to 470     Submitted on the opposite strand 470/470
(100 %)
1 diff
(99.8 %id)
BG187776   .a 3580 to 4016 1 to 437       437/443
(98 %)
2 diff
(99.6 %id)
BG219497   .a 3580 to 4014 1 to 435       435/443
(98 %)
2 diff
(99.6 %id)
AI369268 anaplastic oligodendroglioma, brain .a 3590 to 4035 446 to 1       446/446
(100 %)
0 diff
(100 %id)
BM666382 eye, optic nerve .a 3653 to 4033 399 to 19   fully sequenced, AAA   381/381
(100 %)
0 diff
(100 %id)
BE818759 breast_normal .a 3681 to 3873 192 to 2       191/199
(95 %)
5 diff
(97.5 %id)
BE818770 breast_normal .a 3681 to 3920 240 to 1       240/247
(97 %)
7 diff
(97.2 %id)
AA626865   .a 3745 to 4035 290 to 1       290/322
(90 %)
7 diff
(97.9 %id)
BG183694   .a 3757 to 4023 275 to 10     Submitted on the opposite strand 266/275
(96 %)
0 diff
(100 %id)
BG183695   .a 3757 to 4012 254 to 1     Submitted on the opposite strand 254/254
(100 %)
4 diff
(98.5 %id)
BG193146   .a 3757 to 4012 254 to 1     Submitted on the opposite strand 254/254
(100 %)
3 diff
(98.9 %id)
BG202873   .a 3757 to 4023 274 to 9     Submitted on the opposite strand 266/274
(97 %)
0 diff
(100 %id)
BG206020   .a 3757 to 4001 249 to 4     Submitted on the opposite strand 246/249
(98 %)
0 diff
(100 %id)
BG208597   .a 3757 to 4023 273 to 7     Submitted on the opposite strand 267/273
(97 %)
0 diff
(100 %id)
BG209157   .a 3757 to 4023 271 to 6     Submitted on the opposite strand 266/271
(98 %)
0 diff
(100 %id)
BG213879   .a 3757 to 4025 274 to 6     Submitted on the opposite strand 269/274
(98 %)
0 diff
(100 %id)
BG216549   .a 3757 to 3866 1 to 110       110/110
(100 %)
5 diff
(95.5 %id)
BG228009   .a 3757 to 4023 271 to 6     Submitted on the opposite strand 266/271
(98 %)
0 diff
(100 %id)
CV813242 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 3759 to 4440 1 to 682       682/682
(100 %)
1 diff
(99.9 %id)
BG183182   .a 3766 to 4015 295 to 46     Submitted on the opposite strand 250/304
(82 %)
0 diff
(100 %id)
AI214711   .a 3779 to 4037 257 to 1       257/257
(100 %)
3 diff
(98.9 %id)
BF885385 testis_normal .a 3791 to 3977 190 to 1     Submitted on the opposite strand 190/190
(100 %)
3 diff
(98.5 %id)
W22788 eye, retina .a 3872 to 4372 63 to 569       507/719
(70 %)
30 diff
(95.9 %id)
BM802047 eye, retinoblastoma .a 3995 to 4926 1 to 937       937/1119
(83 %)
34 diff
(97.0 %id)
BE826015 lung_normal .a 4060 to 4456 397 to 1       397/397
(100 %)
2 diff
(99.5 %id)
BM478423 eye, retinoblastoma .a 4120 to 5067 1 to 957       957/1117
(85 %)
66 diff
(94.1 %id)
BU430332 lymph .a 4204 to 4630 8 to 434       427/434
(98 %)
6 diff
(98.7 %id)
TI_154151723   .a 4204 to 4650 80 to 526       447/447
(100 %)
1 diff
(99.8 %id)
BC113085 PCR rescued clones .a 4224 to 4577 18 to 371       354/371
(95 %)
6 diff
(98.4 %id)
BC113086 PCR rescued clones .a 4224 to 4577 18 to 371       354/371
(95 %)
6 diff
(98.4 %id)
BC128041 PCR rescued clones .a 4224 to 4577 22 to 375       354/375
(94 %)
6 diff
(98.4 %id)
BU154127 eye, retinoblastoma .a 4461 to 5305 8 to 850       843/856
(98 %)
7 diff
(99.2 %id)
BQ432100 eye, retinoblastoma .a 4620 to 5511 1 to 895       895/895
(100 %)
17 diff
(98.2 %id)
BU176152 eye, retinoblastoma .a 4766 to 5521 1 to 765       765/891
(85 %)
14 diff
(98.5 %id)
CF453737 peripheral nervous system .a 4769 to 5542 1 to 776       776/776
(100 %)
4 diff
(99.5 %id)
BU159717 eye, retinoblastoma .a 4788 to 5628 1 to 856       856/861
(99 %)
6 diff
(99.4 %id)
BM479334 eye, retinoblastoma .a 4814 to 5655 13 to 854       842/1044
(80 %)
7 diff
(99.4 %id)
AA303144 uterus .a 5155 to 5377 213 to 436     Submitted on the opposite strand 224/436
(51 %)
6 diff
(98.7 %id)
BU167225 eye, retinoblastoma .a 5163 to 6072 1 to 916   tiling clone,   916/916
(100 %)
14 diff
(98.5 %id)
D16475 brain .a 5320 to 5699 1 to 377       377/413
(91 %)
17 diff
(95.9 %id)
BM475933 eye, retinoblastoma .a 5352 to 6339 31 to 1043       1013/1080
(93 %)
49 diff
(95.5 %id)
BM992992 lung, Metastatic Chondrosarcoma .a 5551 to 6028 502 to 19   AAA   484/484
(100 %)
5 diff
(99.0 %id)
CN364708 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 5580 to 6029 1 to 457   AAA   457/457
(100 %)
8 diff
(98.3 %id)
CN478882 Human Lung Epithelial cells, lung .a 5662 to 6034 397 to 19   AAA   379/416
(91 %)
9 diff
(97.9 %id)
N91958 lung .a 5673 to 5859 1 to 187     Submitted on the opposite strand 187/188
(99 %)
1 diff
(99.5 %id)
AA159228 Pancreas .a 5674 to 6028 1 to 358       358/361
(99 %)
6 diff
(98.4 %id)
AW340993 carcinoid, lung .a 5674 to 5991 1 to 318   tiling clone, Submitted on the opposite strand 318/318
(100 %)
0 diff
(100 %id)
BE042909 carcinoid, lung .a 5674 to 5991 1 to 318     Submitted on the opposite strand 318/318
(100 %)
0 diff
(100 %id)
H84064 eye, retina .a 5676 to 6014 1 to 340       340/341
(99 %)
3 diff
(99.2 %id)
AW408072 lymph .a 5706 to 5928 1 to 223       223/223
(100 %)
10 diff
(95.6 %id)
BU159262 eye, retinoblastoma .a 5728 to 6410 1 to 695       695/910
(76 %)
20 diff
(97.9 %id)
AA303143 uterus .a 5747 to 6028 284 to 1     Submitted on the opposite strand 284/284
(100 %)
3 diff
(99.0 %id)
EB387171 eye, optic nerve .a 5767 to 6612 1 to 846   tiling clone,   846/846
(100 %)
2 diff
(99.8 %id)
AA310213   .a 5772 to 6167 1 to 401       401/401
(100 %)
10 diff
(97.6 %id)
BE256503 eye, retinoblastoma .a 5773 to 6364 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
AW949628   .a 5774 to 6300 1 to 531       531/538
(98 %)
23 diff
(95.8 %id)
AW949636   .a 5774 to 6388 1 to 615       615/616
(99 %)
1 diff
(99.9 %id)
BM714131 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5774 to 6272 1 to 499   fully sequenced,   499/499
(100 %)
2 diff
(99.6 %id)
N32659 melanocyte .a 5789 to 6222 1 to 442       442/444
(99 %)
14 diff
(96.9 %id)
BE779809 eye, retinoblastoma .a 5818 to 6477 1 to 663       663/1010
(65 %)
31 diff
(97.0 %id)
BF531080 anaplastic oligodendroglioma with 1p/19qloss, brain .a 5854 to 6673 1 to 801       801/889
(90 %)
67 diff
(92.5 %id)
BG395418 eye, retinoblastoma .a 5974 to 6633 1 to 657       657/661
(99 %)
7 diff
(99.0 %id)
AW005080 anaplastic oligodendroglioma, brain .a 6117 to 6645 529 to 1       529/529
(100 %)
1 diff
(99.9 %id)
CN282911 embryonic stem cells, cell lines H1, H7, andH9 .a 6151 to 6383 1 to 233       233/233
(100 %)
0 diff
(100 %id)
BE257317 eye, retinoblastoma .a 6160 to 6777 1 to 616       616/625
(98 %)
4 diff
(99.4 %id)
BX644993   .a 6176 to 6816 1 to 641       641/650
(98 %)
2 diff
(99.7 %id)
DA712373   .a 6177 to 6736 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA737144   .a 6177 to 7024 2 to 849   capped   848/852
(99 %)
3 diff
(99.7 %id)
AA878739 carcinoid, lung .a 6196 to 6639 443 to 1       443/443
(100 %)
2 diff
(99.6 %id)
AI217674 pooled .a 6224 to 6644 425 to 4       422/425
(99 %)
0 diff
(100 %id)
BU738846 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 6242 to 6638 416 to 19   fully sequenced, AAA   398/398
(100 %)
1 diff
(99.8 %id)
AW872843 squamous cell carcinoma, tongue .a 6243 to 6645 417 to 15   AAA   403/403
(100 %)
8 diff
(98.1 %id)
AW769734 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 6244 to 6645 402 to 1       402/402
(100 %)
0 diff
(100 %id)
CR742581 germinal center B cell .a 6316 to 6782 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
AI041320   .a 6349 to 6646 302 to 5       298/302
(98 %)
0 diff
(100 %id)
CX762516 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 6359 to 7066 1 to 707     Submitted on the opposite strand 707/707
(100 %)
2 diff
(99.8 %id)
BI908880 leukocyte .a 6399 to 7203 1 to 804       804/806
(99 %)
20 diff
(97.6 %id)
TI_57234728   .a 6399 to 7203 34 to 837       804/839
(95 %)
20 diff
(97.7 %id)
CA439018 lung, Lung Focal Fibrosis .a 6416 to 6960 1 to 545     Submitted on the opposite strand 545/545
(100 %)
10 diff
(98.2 %id)
CA439027 lung, Lung Focal Fibrosis .a 6416 to 6933 1 to 518     Submitted on the opposite strand 518/518
(100 %)
11 diff
(97.9 %id)
CR745147 multiple sclerosis lesions .a 6552 to 7235 1 to 684   tiling clone,   684/684
(100 %)
1 diff
(99.9 %id)
AV692411 hepatocellular carcinoma .a 6659 to 7037 1 to 369       369/369
(100 %)
7 diff
(98.2 %id)
BU184259 eye, retinoblastoma .a 6769 to 7611 36 to 893       858/910
(94 %)
29 diff
(96.9 %id)
BM725040 eye, fetal eye .a 6778 to 7456 1 to 679   tiling clone,   679/679
(100 %)
0 diff
(100 %id)
BX113579 heart .a 6837 to 7456 1 to 620       620/620
(100 %)
3 diff
(99.6 %id)
W58007 heart .a 6837 to 7301 1 to 464       464/465
(99 %)
6 diff
(98.8 %id)
CB054174 brain, glioblastoma (pooled) .a 6897 to 7211 1 to 315       315/315
(100 %)
9 diff
(97.2 %id)
W69605 heart .a 6991 to 7442 1 to 457       457/457
(100 %)
7 diff
(98.5 %id)
AI948616 2 pooled tumors (clear cell type), Kidney .a 7070 to 7545 1 to 477     Submitted on the opposite strand 477/477
(100 %)
17 diff
(96.5 %id)
AA625074 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7084 to 7526 14 to 457       444/457
(97 %)
6 diff
(98.7 %id)
AL044599 testis .a 7085 to 8118 1048 to 14   AAA   1035/1054
(98 %)
4 diff
(99.7 %id)
FN150367 breast carcinoma .a 7143 to 7240 99 to 1     Submitted on the opposite strand 99/99
(100 %)
2 diff
(98.0 %id)
TI_149292208   .a 7160 to 8120 1027 to 84   AAA   944/944
(100 %)
40 diff
(95.8 %id)
BM905699 leiomyosarcoma, uterus .a 7177 to 7827 12 to 673       662/999
(66 %)
12 diff
(98.8 %id)
TI_149294527   .a 7273 to 8118 896 to 65   AAA   832/974
(85 %)
25 diff
(97.5 %id)
Z19476 leg muscle, skeletal muscle .a 7283 to 7610 329 to 1       329/329
(100 %)
7 diff
(97.9 %id)
TI_149295384   .a 7308 to 8119 894 to 90   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 805/904
(89 %)
0 diff
(100 %id)
AV660085 corresponding non cancerous liver tissue .a 7317 to 7722 1 to 406   tiling clone, Submitted on the opposite strand 406/406
(100 %)
1 diff
(99.8 %id)
BQ313563 breast_normal .a 7340 to 7544 39 to 248       210/248
(84 %)
6 diff
(97.6 %id)
BM701400 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 7353 to 7719 1 to 368       368/368
(100 %)
8 diff
(97.9 %id)
BM462303 eye, retinoblastoma .a 7409 to 8111 25 to 727   AAA   703/727
(96 %)
6 diff
(99.2 %id)
BM974409 lung .a 7415 to 8120 722 to 17   AAA   706/706
(100 %)
3 diff
(99.6 %id)
BM985053 lung .a 7421 to 8118 716 to 19   AAA   698/698
(100 %)
3 diff
(99.6 %id)
BM727998 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 7423 to 7829 1 to 407   fully sequenced,   407/407
(100 %)
6 diff
(98.6 %id)
CB241298 Human Lung Epithelial cells, lung .a 7433 to 8116 704 to 19   AAA   686/686
(100 %)
3 diff
(99.6 %id)
BQ006906 Chondrosarcoma, Left Pelvis .a 7441 to 8118 696 to 19   AAA   678/678
(100 %)
2 diff
(99.8 %id)
AW022135 cochlea, ear .a 7450 to 8029 8 to 589       582/592
(98 %)
4 diff
(99.4 %id)
U46349 liver cell line, pancreatic cancer .a 7450 to 7774 67 to 392       326/400
(81 %)
4 diff
(99.0 %id)
BI492537 cochlea, ear .a 7457 to 8115 659 to 1       659/659
(100 %)
1 diff
(99.9 %id)
T93651 liver and spleen .a 7473 to 7858 1 to 405       405/408
(99 %)
20 diff
(95.1 %id)
R83602 breast .a 7475 to 7764 1 to 296   fully sequenced,   296/296
(100 %)
1 diff
(99.7 %id)
BM695498 eye, optic nerve .a 7493 to 8117 1 to 625   AAA   625/625
(100 %)
2 diff
(99.7 %id)
BU178308 melanotic melanoma, skin .a 7503 to 8034 1 to 532       532/1083
(49 %)
10 diff
(99.1 %id)
AW972626   .a 7510 to 8110 604 to 1     Submitted on the opposite strand 604/625
(96 %)
18 diff
(97.2 %id)
N38750.
matches multiple genes
melanocyte .a 7523 to 8118 597 to 1     also hits gene C2orf49 597/597
(100 %)
9 diff
(98.5 %id)
BU683594 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 7534 to 8118 603 to 19   AAA   585/585
(100 %)
1 diff
(99.9 %id)
BQ017951 lung, Metastatic Chondrosarcoma .a 7554 to 8118 583 to 19   AAA   565/565
(100 %)
2 diff
(99.7 %id)
EL950802 eyeball .a 7563 to 8119 1 to 556       556/558
(99 %)
3 diff
(99.5 %id)
BM680249 eye, fetal eye .a 7569 to 8118 563 to 19   AAA   545/545
(100 %)
4 diff
(99.3 %id)
AI797182 carcinoid, lung .a 7592 to 8115 541 to 18   AAA   524/524
(100 %)
4 diff
(99.3 %id)
BE857588 brain, glioblastoma (pooled) .a 7592 to 8111 520 to 1       520/520
(100 %)
1 diff
(99.9 %id)
AA160625 Pancreas .a 7596 to 8116 519 to 1       519/521
(99 %)
10 diff
(98.1 %id)
DB369713   .a 7600 to 8117 518 to 1       518/526
(98 %)
1 diff
(99.9 %id)
AI742113 pooled .a 7609 to 8118 520 to 11   AAA   510/510
(100 %)
3 diff
(99.5 %id)
BM471507 eye, retinoblastoma .a 7616 to 8116 62 to 562   AAA   544/562
(96 %)
19 diff
(96.7 %id)
AW014956   .a 7626 to 8014 411 to 23       389/411
(94 %)
0 diff
(100 %id)
AI376954   .a 7634 to 8112 482 to 4       479/483
(99 %)
0 diff
(100 %id)
BF445956 breast, invasive ductal carcinoma, 3 pooled samples .a 7634 to 8118 500 to 17   AAA   484/486
(99 %)
1 diff
(99.8 %id)
TI_153988519   .a 7640 to 8014 474 to 100       375/475
(78 %)
0 diff
(100 %id)
AI150437   .a 7642 to 8118 492 to 16   AAA   477/477
(100 %)
2 diff
(99.6 %id)
AA609690   .a 7654 to 8119 467 to 3       465/467
(99 %)
0 diff
(100 %id)
AI808421 pooled .a 7656 to 8118 473 to 11   AAA   463/463
(100 %)
20 diff
(95.7 %id)
BI494441 cochlea, ear .a 7659 to 8118 8 to 467   fully sequenced, AAA   460/467
(98 %)
6 diff
(98.8 %id)
AW204797   .a 7659 to 8014 378 to 23       356/378
(94 %)
0 diff
(100 %id)
AA947933 carcinoid, lung .a 7662 to 8117 456 to 1       456/456
(100 %)
1 diff
(99.8 %id)
N20129 melanocyte .a 7663 to 8116 457 to 1       457/459
(99 %)
9 diff
(98.1 %id)
W58090 heart .a 7664 to 8119 461 to 4       458/461
(99 %)
0 diff
(100 %id)
BF940667 sciatic nerve .a 7671 to 8132 465 to 4   tiling clone,   462/465
(99 %)
0 diff
(100 %id)
AW514808 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 7672 to 8112 441 to 1       441/441
(100 %)
0 diff
(100 %id)
AI681960 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 7678 to 8119 445 to 5       441/445
(99 %)
0 diff
(100 %id)
N23285 melanocyte .a 7679 to 8116 440 to 1       440/444
(99 %)
7 diff
(98.5 %id)
BF592975 pooled germ cell tumors .a 7679 to 8116 439 to 2       438/439
(99 %)
0 diff
(100 %id)
CB054173 brain, glioblastoma (pooled) .a 7693 to 8118 478 to 53   AAA   426/426
(100 %)
32 diff
(92.5 %id)
AW972432   .a 7695 to 8110 416 to 1     Submitted on the opposite strand 416/462
(90 %)
14 diff
(97.0 %id)
BI494440 cochlea, ear .a 7698 to 8124 438 to 13   fully sequenced, AAA   426/426
(100 %)
5 diff
(98.9 %id)
W03196 liver and spleen .a 7700 to 8119 1 to 421   fully sequenced,   421/421
(100 %)
1 diff
(99.8 %id)
AI560947 anaplastic oligodendroglioma, brain .a 7717 to 8119 407 to 5       403/407
(99 %)
0 diff
(100 %id)
BF477660 Prostate .a 7718 to 8119 402 to 1       402/402
(100 %)
2 diff
(99.6 %id)
AW080022 pooled .a 7721 to 8119 401 to 3       399/403
(99 %)
0 diff
(100 %id)
AI867603 Prostate .a 7724 to 8118 401 to 1       401/411
(97 %)
17 diff
(95.9 %id)
AI250900 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7726 to 8119 396 to 3       394/396
(99 %)
0 diff
(100 %id)
CA503401 Human Lung Epithelial cells, lung .a 7726 to 8117 410 to 19   AAA   392/395
(99 %)
4 diff
(99.0 %id)
AI215903 carcinoid, lung .a 7728 to 8126 398 to 1       398/398
(100 %)
1 diff
(99.8 %id)
R83752 breast .a 7734 to 8117 392 to 1   fully sequenced,   392/392
(100 %)
11 diff
(97.2 %id)
AI146672 uterus .a 7734 to 8112 382 to 4       379/382
(99 %)
0 diff
(100 %id)
AW167564 cervix .a 7742 to 8119 381 to 4       378/381
(99 %)
0 diff
(100 %id)
AA682298 liver and spleen .a 7747 to 8118 384 to 14   AAA   371/371
(100 %)
3 diff
(99.2 %id)
AW078831 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 7747 to 8112 366 to 1       366/370
(98 %)
0 diff
(100 %id)
AI684880 pooled .a 7754 to 8117 367 to 4       364/367
(99 %)
0 diff
(100 %id)
BF941690 Prostate .a 7754 to 8118 365 to 1       365/365
(100 %)
0 diff
(100 %id)
AI261494 adenocarcinoma, colon .a 7759 to 8116 365 to 8       358/365
(98 %)
0 diff
(100 %id)
AI310430 adenocarcinoma, colon .a 7759 to 8116 365 to 8       358/365
(98 %)
0 diff
(100 %id)
AA953427 pooled .a 7761 to 8119 361 to 3       359/361
(99 %)
0 diff
(100 %id)
BI026062 marrow .a 7765 to 8123 1 to 356       356/357
(99 %)
6 diff
(98.4 %id)
AA954485 pooled .a 7771 to 8119 349 to 3       347/349
(99 %)
0 diff
(100 %id)
AI400989 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7772 to 8117 346 to 1       346/350
(98 %)
0 diff
(100 %id)
AW088506 ovary, tumor, 5 pooled (see description) .a 7776 to 8117 341 to 1       341/341
(100 %)
5 diff
(98.6 %id)
H84065 eye, retina .a 7778 to 8084 309 to 4       306/309
(99 %)
0 diff
(100 %id)
BM680576 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 7799 to 8118 338 to 19   fully sequenced, AAA   320/320
(100 %)
0 diff
(100 %id)
AI609135 brain, tumor, 5 pooled (see description) .a 7810 to 8119 310 to 1       310/310
(100 %)
0 diff
(100 %id)
AI672581 thymus, pooled .a 7811 to 8119 309 to 1       309/309
(100 %)
0 diff
(100 %id)
BG149971 carcinoid, lung .a 7814 to 8119 308 to 3       306/308
(99 %)
0 diff
(100 %id)
AA515773 colon .a 7827 to 8112 285 to 1       285/285
(100 %)
1 diff
(99.7 %id)
AA931675 carcinoid, lung .a 7840 to 8110 271 to 1       271/271
(100 %)
0 diff
(100 %id)
AW016489   .a 7840 to 8126 304 to 18   AAA   287/287
(100 %)
3 diff
(99.0 %id)
AA983935 pooled .a 7850 to 8112 265 to 3       263/265
(99 %)
0 diff
(100 %id)
W24204 lung .a 7852 to 8116 265 to 1     Submitted on the opposite strand 265/267
(99 %)
0 diff
(100 %id)
BU532886 mixed (pool of 40 RNAs) .a 7858 to 8111 1 to 254   AAA   254/254
(100 %)
2 diff
(99.3 %id)
T93607 liver and spleen .a 7863 to 8119 262 to 2       261/267
(97 %)
0 diff
(100 %id)
AI214738   .a 7870 to 8119 253 to 4       250/253
(98 %)
0 diff
(100 %id)
N71772 melanocyte .a 7875 to 8118 245 to 1       245/245
(100 %)
1 diff
(99.6 %id)
AA932081 carcinoid, lung .a 7882 to 8119 239 to 2       238/239
(99 %)
0 diff
(100 %id)
CA428366 Bone, Subchondral Bone .a 7934 to 8626 704 to 12   tiling clone, AAA   693/693
(100 %)
2 diff
(99.8 %id)
N74493 liver and spleen .a 7949 to 8118 171 to 1   fully sequenced,   171/171
(100 %)
0 diff
(100 %id)
BM674302 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 8022 to 8620 617 to 19   AAA   599/599
(100 %)
3 diff
(99.5 %id)
AA743221 germinal center B cell .a 8266 to 8626 373 to 13   tiling clone, AAA   361/361
(100 %)
3 diff
(99.2 %id)
BC108287 Eye, retinoblastoma .b 1 to 2129 1 to 2128 R428V P429L T430H L431S H432I ... tiling clone, AAA   2128/2128
(100 %)
2 diff
(100.0 %id)
TI_149306333   .b 995 to 1821 905 to 88   AAA   818/971
(84 %)
14 diff
(98.6 %id)
BU686380 lung, Primary Lung Epithelial Cells .b 1119 to 1821 718 to 17   tiling clone, AAA   702/702
(100 %)
3 diff
(99.6 %id)
CA313870 Human Lung Epithelial cells, lung .b 1147 to 1821 690 to 17   AAA   674/675
(99 %)
2 diff
(99.8 %id)
DB524531 testis .b 1348 to 1821 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
DB520768 testis .b 1358 to 1821 1 to 465     Submitted on the opposite strand 465/466
(99 %)
4 diff
(99.2 %id)
AI866477 brain, tumor, 5 pooled (see description) .b 1360 to 1821 499 to 38   AAA   462/462
(100 %)
39 diff
(91.6 %id)
DB525463 testis .b 1383 to 1821 1 to 439     Submitted on the opposite strand 439/439
(100 %)
0 diff
(100 %id)
BU190000 eye, retinoblastoma .b 1429 to 2313 1 to 889   tiling clone,   889/907
(98 %)
14 diff
(98.5 %id)
DB462008 testis .c 1 to 482 1 to 482 exact tiling clone,   482/482
(100 %)
0 diff
(100 %id)
N77029 multiple sclerosis lesions .d-u 1 to 486 1 to 487 H49X tiling clone,   487/489
(99 %)
4 diff
(99.2 %id)
N59888 multiple sclerosis lesions .d-u 586 to 1026 442 to 1   tiling clone,   442/442
(100 %)
7 diff
(98.5 %id)
BQ182526 Knee, Osteoarthritic Cartilage .e 1 to 681 698 to 19 exact tiling clone, AAA   680/680
(100 %)
2 diff
(99.8 %id)
AW510659 pooled .e 191 to 689 505 to 5 exact     501/505
(99 %)
0 diff
(100 %id)
BX116896   .f-u 1 to 441 1 to 441   tiling clone,   441/441
(100 %)
0 diff
(100 %id)
BE465686 malignant melanoma, metastatic to lymphnode, skin .f-u 217 to 676 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AI214350   .f-u 243 to 683 439 to 5   tiling clone,   435/463
(93 %)
0 diff
(100 %id)
AW137062   .g 1 to 343 360 to 18 exact tiling clone, AAA   343/353
(97 %)
0 diff
(100 %id)
AA927776 pooled germ cell tumors .g 34 to 343 309 to 1       309/309
(100 %)
5 diff
(98.4 %id)
BE047010 pooled germ cell tumors .g 34 to 343 310 to 1       310/310
(100 %)
0 diff
(100 %id)
AV686113 hepatocellular carcinoma Gene ZNF516, variant not shown         Suspected internal deletion, this clone was ignored    
AV747370 Pituitary Gene ZNF516, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
EB386488 eye, optic nerve Gene ZNF516, variant not shown         Suspected internal deletion, this clone was ignored    
DB314702   Gene ZNF516, variant not shown         Suspected internal deletion, this clone was ignored    
DA468139   Gene ZNF516, variant not shown       capped Suspected internal deletion, this clone was ignored    
BG396029 eye, retinoblastoma Gene ZNF516, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f-u, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C