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Gene ZNF490_TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
268 supporting clones for gene ZNF490_ back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA482012   .a 1 to 587 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DN995074 brain, whole brain .a 17 to 427 32 to 442       411/442
(92 %)
6 diff
(98.7 %id)
DB314943   .a 2420 to 2954 536 to 1   tiling clone,   536/536
(100 %)
1 diff
(99.9 %id)
DC417031 trachea .b 1 to 589 1 to 589   tiling clone,   589/589
(100 %)
0 diff
(100 %id)
BX954970   .b 11 to 599 1 to 589       589/589
(100 %)
3 diff
(99.5 %id)
NM_152601.3   .b 12 to 4909 1 to 4898   RefSeq, AAA   4898/4898
(100 %)
0 diff
(100 %id)
DC351830 brain .b 14 to 571 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC423103 uterus .b 14 to 559 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC412469 kidney, tumor tissue .b 38 to 587 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
DC324630 brain .b 68 to 656 1 to 589       589/589
(100 %)
0 diff
(100 %id)
AK290911   .b 73 to 2207 1 to 2134   tiling clone,   2134/2134
(100 %)
1 diff
(100.0 %id)
DC428785   .b 73 to 665 1 to 593       593/593
(100 %)
0 diff
(100 %id)
BC136746 Testicle, PCR rescued clones .b 96 to 2139 1 to 2044       2044/2044
(100 %)
1 diff
(100.0 %id)
BC136751 Testicle, PCR rescued clones .b 96 to 2139 1 to 2044       2044/2044
(100 %)
1 diff
(100.0 %id)
TI_1971556487   .b 96 to 901 246 to 1043     Submitted on the opposite strand 798/1221
(65 %)
17 diff
(98.7 %id)
TI_1971558089   .b 96 to 565 53 to 522       470/522
(90 %)
16 diff
(97.0 %id)
TI_1971555363   .b 96 to 773 687 to 10       678/1260
(53 %)
0 diff
(100 %id)
TI_1971556319   .b 96 to 1005 912 to 5       908/1293
(70 %)
0 diff
(100 %id)
TI_1971558581   .b 99 to 1212 1110 to 5       1106/1241
(89 %)
13 diff
(99.0 %id)
TI_1971558703   .b 127 to 1218 1091 to 2       1090/1248
(87 %)
11 diff
(99.2 %id)
TI_1971558825   .b 148 to 1210 1065 to 7       1059/1258
(84 %)
6 diff
(99.6 %id)
DB069645 testis .b 913 to 1447 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA813920   .b 3408 to 3978 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
BG115649 duodenal adenocarcinoma, cell line, small intestine .b 3768 to 4524 1 to 749   tiling clone,   749/1044
(71 %)
22 diff
(97.9 %id)
BP319106 pericardium .b 4108 to 4690 1 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
BQ027911 mixed .b 4276 to 4909 652 to 19   tiling clone, AAA   634/634
(100 %)
1 diff
(99.9 %id)
DB340047 testis .b 4352 to 4907 556 to 1       556/556
(100 %)
2 diff
(99.7 %id)
DB327623   .b 4357 to 4903 548 to 1       548/548
(100 %)
2 diff
(99.7 %id)
BE856068 Prostate .b 4367 to 4788 422 to 1       422/422
(100 %)
1 diff
(99.8 %id)
AI800025 Prostate .b 4442 to 4905 465 to 2       464/465
(99 %)
0 diff
(100 %id)
AA829697 ovary .b 4462 to 4855 1 to 393       393/393
(100 %)
6 diff
(98.5 %id)
AW979179   .b 4466 to 4907 108 to 549   AAA   442/549
(80 %)
6 diff
(99.0 %id)
FN118981 breast carcinoma .b 4520 to 4587 1 to 68       68/69
(98 %)
5 diff
(92.8 %id)
AA373865 lung .b 4547 to 4909 368 to 1     Submitted on the opposite strand 368/370
(99 %)
10 diff
(97.3 %id)
DA740363   .c 1 to 514 7 to 520   capped   519/519
(100 %)
9 diff
(98.3 %id)
DA774454 brain .c 1 to 561 7 to 567   capped   566/566
(100 %)
5 diff
(99.2 %id)
CD698138 normal nasopharynx .c 1 to 516 44 to 559   tiling clone,   518/559
(92 %)
7 diff
(98.8 %id)
DA492610 brain .c 1 to 576 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA835959 placenta .c 34 to 578 2 to 546   capped   545/546
(99 %)
2 diff
(99.7 %id)
BQ644911 hepatocellular carcinoma, cell line, Liver .c 38 to 842 11 to 826       816/968
(84 %)
49 diff
(95.0 %id)
BQ647436 hepatocellular carcinoma, cell line, Liver .c 46 to 784 1 to 749       749/885
(84 %)
15 diff
(98.4 %id)
BQ900989 hepatocellular carcinoma, cell line, Liver .c 49 to 649 1 to 605       605/799
(75 %)
8 diff
(99.0 %id)
DA793890.
matches multiple genes
brain .c 54 to 611 2 to 560   capped also hits gene ZNF799 559/559
(100 %)
14 diff
(97.5 %id)
BU181851 eye, retinoblastoma .c 55 to 981 1 to 926       926/926
(100 %)
10 diff
(99.0 %id)
DB272757 uterus .c 57 to 622 2 to 569   capped   568/568
(100 %)
6 diff
(99.0 %id)
AB011414   .c 59 to 2627 1 to 2569 V72I K480T C485F tiling clone, AAA   2569/2569
(100 %)
5 diff
(99.9 %id)
BC032753 Testis, embryonal carcinoma .c 72 to 2627 12 to 2567 V72I K480T C485F tiling clone, available from MGC, AAA   2556/2556
(100 %)
6 diff
(99.8 %id)
BM456982 embryonal carcinoma, cell line, testis .c 72 to 1046 1 to 987       987/1026
(96 %)
21 diff
(98.0 %id)
DA497421 brain .c 77 to 660 2 to 585   capped   584/584
(100 %)
4 diff
(99.4 %id)
DA950513 Spleen .c 82 to 630 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
AK023025   .c 83 to 2627 1 to 2545 V44G K111I Y121C Q397H L481R ... tiling clone, available from FLJ,   2545/2545
(100 %)
18 diff
(99.3 %id)
AU129521   .c 83 to 544 2 to 464   capped   463/470
(98 %)
8 diff
(98.3 %id)
DA791916 brain .c 89 to 642 2 to 556   capped   555/555
(100 %)
5 diff
(99.1 %id)
DA505695 brain .c 92 to 661 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA508898 brain .c 96 to 643 2 to 550   capped   549/549
(100 %)
8 diff
(98.6 %id)
DA771306 brain .c 96 to 654 2 to 562   capped   561/561
(100 %)
6 diff
(99.0 %id)
AU099095   .c 110 to 409 1 to 300       300/300
(100 %)
5 diff
(98.4 %id)
DA701255   .c 126 to 612 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DA773796 brain .c 129 to 612 2 to 485   capped   484/484
(100 %)
0 diff
(100 %id)
DA478629   .c 166 to 559 180 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
NM_005815.4   .c 166 to 2627 202 to 2663 C485F RefSeq, AAA   2663/2663
(100 %)
1 diff
(100.0 %id)
DA778355 brain .c 166 to 541 204 to 579   capped   578/578
(100 %)
4 diff
(99.4 %id)
DA826175 pericardium .c 166 to 551 187 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA943994 Spleen .c 166 to 543 203 to 580   capped   579/579
(100 %)
6 diff
(99.0 %id)
DB264395 uterus .c 166 to 536 195 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
CD653005 Embryonic Stem cells .c 180 to 899 3 to 716       714/807
(88 %)
18 diff
(97.8 %id)
DB266710 uterus .c 279 to 657 2 to 380   capped   379/379
(100 %)
3 diff
(99.3 %id)
CB136136 Liver .c 323 to 885 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BU603415 mixed (pool of 40 RNAs) .c 566 to 1292 1 to 731       731/827
(88 %)
24 diff
(97.1 %id)
BX437528 thymus .c 815 to 1708 9 to 902   tiling clone,   894/902
(99 %)
6 diff
(99.4 %id)
AU151627   .c 2128 to 2627 499 to 1       499/500
(99 %)
7 diff
(98.6 %id)
AK095600 brain .d 1 to 4505 1 to 4503 exact tiling clone, available from FLJ,   4503/4503
(100 %)
5 diff
(99.9 %id)
DA493682 brain .d 2 to 567 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
TI_1971555337   .d 742 to 1945 1 to 1194       1194/1273
(93 %)
6 diff
(99.6 %id)
TI_1971555365   .d 743 to 1811 1074 to 5       1070/1271
(84 %)
0 diff
(100 %id)
DA128468 cerebellum .d 1708 to 2292 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BQ432210 eye, retinoblastoma .d 1767 to 2269 1 to 503   tiling clone,   503/802
(62 %)
14 diff
(98.3 %id)
DA043000 bladder .d 2112 to 2679 2 to 569   capped   568/568
(100 %)
4 diff
(99.3 %id)
AW243490 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .d 2409 to 2660 253 to 1       253/253
(100 %)
1 diff
(99.7 %id)
BP293843 lung .d 2454 to 3026 1 to 573       573/573
(100 %)
6 diff
(99.0 %id)
BP293998 lung .d 2454 to 3036 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BX098390 lung .d 2512 to 3201 1 to 690   tiling clone, AAA   690/690
(100 %)
2 diff
(99.8 %id)
W24407 lung .d 2512 to 2764 17 to 269       253/271
(93 %)
1 diff
(99.7 %id)
AI668686 lung .d 2647 to 3203 557 to 1       557/557
(100 %)
3 diff
(99.5 %id)
N93104 lung .d 2940 to 3204 266 to 1       266/266
(100 %)
1 diff
(99.7 %id)
DB192524 ovary, tumor tissue .d 2953 to 3499 2 to 550   tiling clone, capped   549/549
(100 %)
3 diff
(99.5 %id)
W01677 liver and spleen .d 3244 to 3432 1 to 189       189/189
(100 %)
0 diff
(100 %id)
DB315532 brain .d 3961 to 4505 544 to 1   tiling clone,   544/544
(100 %)
1 diff
(99.9 %id)
DA728759   .e 1 to 799 2 to 800   tiling clone, capped   799/799
(100 %)
2 diff
(99.8 %id)
BM478696 melanotic melanoma, skin .e 850 to 1813 13 to 988   tiling clone,   976/1119
(87 %)
32 diff
(97.2 %id)
DA077211 cerebellum .e 873 to 1445 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
BG292565 bladder, transitional cell papilloma, cell line .e 890 to 1422 1 to 538       538/909
(59 %)
26 diff
(97.2 %id)
BE882737 leiomyosarcoma, uterus .e 944 to 1682 1 to 733       733/820
(89 %)
20 diff
(97.6 %id)
CF141724 CNCAP(3)T-225 cell line, Prostate .e 1131 to 1734 1 to 604       604/604
(100 %)
14 diff
(97.7 %id)
TI_154172547   .e 1141 to 2010 92 to 970       879/1075
(81 %)
54 diff
(95.0 %id)
BG741001 skin .e 1315 to 2147 1 to 836   tiling clone,   836/836
(100 %)
14 diff
(98.4 %id)
BQ921909 leiomyosarcoma, uterus .e 1369 to 2258 1 to 896   tiling clone,   896/897
(99 %)
11 diff
(98.8 %id)
DB353800   .e 2099 to 2661 555 to 1   tiling clone,   555/578
(96 %)
10 diff
(98.3 %id)
AI613104 Kidney .e 2138 to 2661 524 to 1   tiling clone,   524/524
(100 %)
5 diff
(99.1 %id)
AI905301 breast .e 2199 to 2591 392 to 1       392/568
(69 %)
11 diff
(98.1 %id)
AW770326 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .e 2236 to 2662 427 to 1       427/427
(100 %)
1 diff
(99.8 %id)
TI_159714932   .e 2450 to 3234 881 to 97   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 785/1045
(75 %)
3 diff
(99.8 %id)
CB321847 Human Lung Epithelial cells, lung .e 2501 to 3234 752 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 734/734
(100 %)
2 diff
(99.8 %id)
FN171705 breast carcinoma .e 2596 to 2661 66 to 1     Submitted on the opposite strand 66/66
(100 %)
3 diff
(95.5 %id)
BF000618 colon, colon tumor, RER+ .e 2728 to 3240 513 to 1   tiling clone,   513/513
(100 %)
2 diff
(99.7 %id)
BF510720   .e 2748 to 3234 503 to 18   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 486/492
(98 %)
4 diff
(99.2 %id)
AL834146 amygdala .f 1 to 5855 1 to 5856 exact tiling clone, available from DKFZ, AAA   5856/5856
(100 %)
6 diff
(99.9 %id)
BG978073 colon_ins .f 3194 to 3345 209 to 58       152/209
(72 %)
0 diff
(100 %id)
AW168648 bowel (skin primary), metastatic melanoma to bowel .f 3508 to 3770 278 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 267/282
(94 %)
3 diff
(99.0 %id)
TI_1971555357   .f 3541 to 4529 1094 to 112       983/1193
(82 %)
5 diff
(99.6 %id)
DB126226 thymus .f 3657 to 4230 2 to 575   capped   574/575
(99 %)
3 diff
(99.5 %id)
U89881 retina .f 3665 to 3838 1 to 168       168/168
(100 %)
6 diff
(96.5 %id)
NM_144976.3   .g 1 to 2947 1 to 2947 exact RefSeq, AAA   2947/2947
(100 %)
0 diff
(100 %id)
BP202057 amygdala .g 14 to 596 1 to 583   tiling clone,   583/583
(100 %)
5 diff
(99.2 %id)
BX647959 human endometrium carcinoma cell line .g 30 to 2596 1 to 2568 Q241* available from DKFZ, AAA   2568/2568
(100 %)
3 diff
(99.9 %id)
DA544379   .g 30 to 590 2 to 562   tiling clone, capped   561/561
(100 %)
4 diff
(99.3 %id)
DB472197 hippocampus .g 33 to 528 1 to 497       497/497
(100 %)
6 diff
(98.8 %id)
DA447320 tongue, tumor tissue .g 34 to 616 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA488407 brain .g 34 to 566 2 to 535   capped   534/534
(100 %)
2 diff
(99.7 %id)
AK092760 small intestine .g 40 to 2592 1 to 2553 exact available from FLJ,   2553/2553
(100 %)
0 diff
(100 %id)
AX747711   .g 40 to 2592 1 to 2553 exact     2553/2553
(100 %)
0 diff
(100 %id)
DA445256 tongue, tumor tissue .g 41 to 597 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA918226 small intestine .g 41 to 597 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB202234 trachea .g 41 to 603 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BQ050115 lymph, lymphoma, cell line .g 43 to 662 12 to 633       622/1243
(50 %)
12 diff
(99.1 %id)
DA744896   .g 59 to 622 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BG771726 testis .g 64 to 818 1 to 754   available from MGC,   754/754
(100 %)
6 diff
(99.3 %id)
DA005553   .g 68 to 575 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
DB006970 cervix, tumor tissue .g 68 to 634 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA436755 tongue, tumor tissue .g 69 to 664 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
BC028367 testis .g 69 to 2947 6 to 2884 exact tiling clone, available from MGC, AAA   2879/2879
(100 %)
0 diff
(100 %id)
DA793217 brain .g 70 to 601 2 to 534   capped   533/533
(100 %)
5 diff
(99.1 %id)
DB105802 thymus .g 70 to 610 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA591185 lung .g 72 to 644 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BM462502 leiomyosarcoma, uterus .g 84 to 822 1 to 749       749/1145
(65 %)
23 diff
(98.0 %id)
CX757664 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .g 90 to 821 33 to 764     Submitted on the opposite strand 732/764
(95 %)
10 diff
(98.7 %id)
BC065023 Testis, embryonal carcinoma .g 91 to 2592 1 to 2502 exact available from MGC, AAA   2502/2502
(100 %)
0 diff
(100 %id)
CN399363 embryonic stem cells, cell lines H1, H7, andH9 .g 93 to 662 9 to 577       569/577
(98 %)
6 diff
(99.0 %id)
CT004154 T-Lymphocytes .g 98 to 415 1 to 316       316/322
(98 %)
8 diff
(97.6 %id)
DN995037 brain, whole brain .g 100 to 739 1 to 640       640/640
(100 %)
5 diff
(99.3 %id)
DA493923 brain .g 112 to 687 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA745377   .g 112 to 684 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA011326 adrenal gland .g 135 to 685 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA510810 brain .g 135 to 710 2 to 578   capped   575/577
(99 %)
1 diff
(99.9 %id)
BC136728 Brain, cerebellum, PCR rescued clones .g 165 to 2366 1 to 2203 exact     2203/2203
(100 %)
1 diff
(100.0 %id)
BC136729 Testicle, PCR rescued clones .g 165 to 2366 1 to 2202 exact     2202/2202
(100 %)
0 diff
(100 %id)
DB331798 small intestine .g 2056 to 2592 543 to 1       543/549
(98 %)
7 diff
(98.8 %id)
DB540952 hippocampus .g 2153 to 2600 1 to 448     Submitted on the opposite strand 448/448
(100 %)
2 diff
(99.6 %id)
AI819178 2 pooled tumors (clear cell type), Kidney .g 2171 to 2598 430 to 3       428/430
(99 %)
0 diff
(100 %id)
DB069551 testis .h 1 to 541 2 to 542   tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
NM_020714.2   .h 11 to 6108 1 to 6098 exact RefSeq,   6098/6098
(100 %)
0 diff
(100 %id)
DA404651 thalamus .h 12 to 483 2 to 474   capped   473/475
(99 %)
11 diff
(97.7 %id)
AB033024 brain .h 17 to 6108 1 to 6090 exact tiling clone, available from KIAA,   6090/6090
(100 %)
8 diff
(99.9 %id)
BC038586 Testis, embryonal carcinoma .h 39 to 6382 12 to 6353 exact tiling clone, available from MGC, AAA   6342/6342
(100 %)
10 diff
(99.9 %id)
BM469171 embryonal carcinoma, cell line, testis .h 39 to 907 1 to 880       880/1039
(84 %)
19 diff
(98.2 %id)
BM457368 embryonal carcinoma, cell line, testis .h 90 to 949 1 to 863       863/1067
(80 %)
9 diff
(99.2 %id)
DA228492 brain .h 105 to 673 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
TI_1948136866   .h 137 to 940 125 to 930       806/1429
(56 %)
35 diff
(97.6 %id)
TI_1948136867   .h 137 to 1025 125 to 1031       907/1385
(65 %)
39 diff
(97.2 %id)
TI_1948137205   .h 137 to 959 128 to 938       811/1419
(57 %)
35 diff
(97.6 %id)
TI_1948137206   .h 137 to 884 123 to 872       750/1419
(52 %)
27 diff
(98.1 %id)
TI_1948137548   .h 137 to 1105 128 to 1101       974/1488
(65 %)
51 diff
(96.6 %id)
TI_1948137549   .h 137 to 922 128 to 920       793/1391
(57 %)
24 diff
(98.3 %id)
TI_1948137897   .h 137 to 1032 125 to 1016       892/1445
(61 %)
45 diff
(96.9 %id)
TI_1948137898   .h 137 to 935 122 to 933       812/1365
(59 %)
27 diff
(98.1 %id)
CV030890 mixed .h 140 to 690 1 to 551       551/551
(100 %)
3 diff
(99.5 %id)
AI934409 Kidney .h 169 to 614 448 to 3       446/448
(99 %)
0 diff
(100 %id)
BQ306418 breast .h 429 to 905 508 to 36       473/508
(93 %)
4 diff
(99.3 %id)
BQ223109 large cell carcinoma, lung .h 566 to 1380 1 to 823       823/915
(89 %)
27 diff
(97.1 %id)
AW504245 lymph .h 785 to 1216 1 to 432       432/432
(100 %)
3 diff
(99.4 %id)
TI_154160326   .h 791 to 1338 83 to 630       548/548
(100 %)
1 diff
(99.9 %id)
TI_1948136868   .h 817 to 1733 1050 to 121       930/1188
(78 %)
0 diff
(100 %id)
TI_1948137551   .h 836 to 1733 1023 to 125       899/1406
(63 %)
0 diff
(100 %id)
TI_1948137899   .h 875 to 1733 982 to 118       865/1175
(73 %)
0 diff
(100 %id)
TI_1948137900   .h 879 to 1733 988 to 124       865/1436
(60 %)
0 diff
(100 %id)
TI_1948137208   .h 933 to 1733 945 to 123       823/1487
(55 %)
0 diff
(100 %id)
TI_1948137550   .h 939 to 1733 921 to 120       802/1208
(66 %)
0 diff
(100 %id)
TI_1948136869   .h 952 to 1733 915 to 127       789/1499
(52 %)
0 diff
(100 %id)
TI_1948137207   .h 958 to 1733 896 to 117       780/1217
(64 %)
0 diff
(100 %id)
AA349989 brain .h 1501 to 1889 1 to 389   tiling clone,   389/389
(100 %)
1 diff
(99.8 %id)
EH325414   .h 1976 to 2053 1 to 78       78/78
(100 %)
0 diff
(100 %id)
CF135974 lymph .h 2191 to 2829 8 to 645       638/645
(98 %)
9 diff
(98.7 %id)
TI_154164688   .h 2191 to 3004 77 to 877       801/892
(89 %)
16 diff
(98.3 %id)
CD706518 normal nasopharynx .h 2930 to 3385 16 to 470   tiling clone,   455/470
(96 %)
6 diff
(98.8 %id)
BI031767 marrow .h 2985 to 3417 433 to 1       433/459
(94 %)
6 diff
(98.7 %id)
BE047776 brain, tumor, 5 pooled (see description) .h 3321 to 3767 1 to 447       447/447
(100 %)
0 diff
(100 %id)
FN147153 breast carcinoma .h 3331 to 3422 1 to 90       90/90
(100 %)
4 diff
(95.6 %id)
BX095189 liver and spleen .h 3370 to 4031 1 to 662       662/662
(100 %)
1 diff
(99.9 %id)
T79032 liver and spleen .h 3370 to 3788 1 to 428       428/428
(100 %)
20 diff
(95.4 %id)
T86498 liver and spleen .h 3370 to 3825 1 to 473       473/522
(90 %)
17 diff
(96.8 %id)
T85514 liver and spleen .h 3371 to 3526 1 to 159       159/163
(97 %)
9 diff
(94.5 %id)
W90539 liver and spleen .h 3399 to 3826 1 to 430   fully sequenced,   430/430
(100 %)
6 diff
(98.7 %id)
BE741811 adenocarcinoma cell line, ovary .h 3416 to 4043 13 to 639       627/639
(98 %)
6 diff
(99.1 %id)
BE745585 adenocarcinoma cell line, ovary .h 3434 to 4197 1 to 762       762/766
(99 %)
16 diff
(98.0 %id)
TI_154136640   .h 3481 to 4252 825 to 59   AAA   767/1282
(59 %)
30 diff
(97.7 %id)
BF894392 marrow .h 3718 to 4192 488 to 13     Submitted on the opposite strand 476/488
(97 %)
0 diff
(100 %id)
W90578 liver and spleen .h 3796 to 4260 472 to 1   fully sequenced,   472/472
(100 %)
10 diff
(97.9 %id)
FN073940 breast carcinoma .h 3809 to 3865 57 to 1     Submitted on the opposite strand 57/58
(98 %)
0 diff
(100 %id)
T86410 liver and spleen .h 3848 to 4248 400 to 1       400/404
(99 %)
5 diff
(98.8 %id)
AI709138 colon .h 3867 to 4253 389 to 3       387/389
(99 %)
0 diff
(100 %id)
AA890473 parathyroid gland, parathyroid tumor .h 3888 to 4253 371 to 6       366/371
(98 %)
0 diff
(100 %id)
T79033 liver and spleen .h 3939 to 4253 322 to 1       322/326
(98 %)
11 diff
(96.7 %id)
T85302 liver and spleen .h 3952 to 4242 295 to 1       295/347
(85 %)
6 diff
(98.3 %id)
AI784127 pooled .h 4061 to 4253 198 to 6       193/198
(97 %)
0 diff
(100 %id)
CN357415 embryonic stem cells, DMSO-treated H9 cellline .h 4770 to 5377 1 to 608       608/619
(98 %)
4 diff
(99.4 %id)
BF805242 colon_ins .h 4804 to 5312 514 to 6     Submitted on the opposite strand 509/514
(99 %)
0 diff
(100 %id)
AI302688 carcinoid, lung .h 5398 to 5918 1 to 521     Submitted on the opposite strand 521/521
(100 %)
3 diff
(99.5 %id)
BQ000748 lung, Metastatic Chondrosarcoma .h 5472 to 6112 659 to 19   AAA   641/641
(100 %)
2 diff
(99.7 %id)
CA428349 Bone, Subchondral Bone .h 5521 to 6215 711 to 19   AAA   693/693
(100 %)
5 diff
(99.3 %id)
AI752918 bone marrow stroma .h 5860 to 6210 382 to 32   AAA   351/351
(100 %)
0 diff
(100 %id)
CN390942 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .i 1 to 338 1 to 338   tiling clone,   338/338
(100 %)
0 diff
(100 %id)
DA970061 stomach .i 297 to 862 2 to 567   tiling clone, capped   566/567
(99 %)
1 diff
(99.9 %id)
BG034726 breast, mammary adenocarcinoma, cell line .i 465 to 1002 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
EC458496 Prostate .i 535 to 632 1 to 95       95/99
(95 %)
7 diff
(93.0 %id)
TI_1971555359   .i 587 to 1749 1151 to 2   tiling clone,   1150/1244
(92 %)
0 diff
(100 %id)
EC573555 Prostate .i 656 to 734 1 to 78       78/81
(96 %)
4 diff
(95.1 %id)
AW858429 colon .i 767 to 1075 329 to 18       312/361
(86 %)
0 diff
(100 %id)
AW858487 colon .i 767 to 1100 6 to 334       329/339
(97 %)
9 diff
(97.4 %id)
AW861883 colon .i 767 to 1100 338 to 5       334/341
(97 %)
0 diff
(100 %id)
FN137521 breast carcinoma .i 771 to 883 113 to 1     Submitted on the opposite strand 113/113
(100 %)
0 diff
(100 %id)
BQ946140 leiomyosarcoma, uterus .i 933 to 1804 1 to 872       872/872
(100 %)
4 diff
(99.6 %id)
BP204202 coronary artery .i 1000 to 1572 1 to 578       578/581
(99 %)
17 diff
(97.1 %id)
BP204871 coronary artery .i 1000 to 1583 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
BE748069 bone marrow, from acute myelogenous leukemia .i 1075 to 1766 1 to 691       691/798
(86 %)
59 diff
(92.7 %id)
BQ709578 Spleen .i 1266 to 2196 1 to 939       939/943
(99 %)
20 diff
(97.9 %id)
BG741965 skin .i 1327 to 2073 1 to 749       749/749
(100 %)
12 diff
(98.4 %id)
AA134518 colon, tumor .i 1359 to 1871 1 to 519       519/519
(100 %)
7 diff
(98.7 %id)
AA130554 colon, tumor .i 1359 to 1882 1 to 527       527/527
(100 %)
4 diff
(99.3 %id)
CD105714 brain, Pituitary .i 1370 to 2068 1 to 703       703/762
(92 %)
5 diff
(99.4 %id)
CF887188 Human Lung Epithelial cells, lung .i 1422 to 1889 1 to 467   fully sequenced,   467/467
(100 %)
1 diff
(99.8 %id)
TI_159717116   .i 1427 to 2366 1018 to 95   AAA   924/996
(92 %)
23 diff
(97.7 %id)
CB852254 Human Lung Epithelial cells, lung .i 1518 to 2366 859 to 19   tiling clone, AAA   841/841
(100 %)
9 diff
(99.0 %id)
TI_149309536   .i 1536 to 2370 918 to 84   AAA   835/983
(84 %)
6 diff
(99.4 %id)
TI_154107645   .i 1547 to 2370 890 to 73   AAA   818/953
(85 %)
11 diff
(98.9 %id)
AA625428 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .i 1571 to 2009 1 to 439       439/439
(100 %)
3 diff
(99.4 %id)
BE748617 bone marrow, from acute myelogenous leukemia .i 1616 to 2308 695 to 1       695/804
(86 %)
5 diff
(99.4 %id)
BU687922 lung .i 1629 to 2370 761 to 19   AAA   743/743
(100 %)
1 diff
(99.9 %id)
BU595588 mixed (pool of 40 RNAs) .i 1665 to 2348 1 to 685   AAA   685/685
(100 %)
8 diff
(98.9 %id)
BM716708 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .i 1721 to 2048 1 to 328   fully sequenced,   328/328
(100 %)
0 diff
(100 %id)
AI888067 serous papillary carcinoma, high grade, 2pooled tumors, uterus .i 1852 to 2370 519 to 1   tiling clone,   519/519
(100 %)
0 diff
(100 %id)
CF891353 Human Lung Epithelial cells, lung .i 1859 to 2366 526 to 19   fully sequenced, AAA   508/508
(100 %)
0 diff
(100 %id)
TI_151776238   .i 1864 to 2370 222 to 732       511/737
(69 %)
16 diff
(97.9 %id)
AA130590 colon, tumor .i 1882 to 2366 490 to 1       490/490
(100 %)
4 diff
(99.2 %id)
AA130567 colon, tumor .i 1888 to 2368 486 to 1       486/486
(100 %)
6 diff
(98.8 %id)
AI276917 placenta .i 1897 to 2372 477 to 2       476/477
(99 %)
0 diff
(100 %id)
T64632 lung .i 1936 to 2200 1 to 268   fully sequenced,   268/268
(100 %)
2 diff
(99.3 %id)
AW081438 colon, moderately differentiated adenocarcinoma .i 1946 to 2368 425 to 2       424/425
(99 %)
0 diff
(100 %id)
AI537727 serous papillary carcinoma, high grade, 2pooled tumors, uterus .i 1948 to 2366 420 to 1       420/420
(100 %)
3 diff
(99.3 %id)
AI373691 uterus .i 1954 to 2367 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AW073375 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .i 1957 to 2366 410 to 1       410/410
(100 %)
1 diff
(99.8 %id)
BU738462 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .i 2018 to 2370 371 to 19   fully sequenced, AAA   353/353
(100 %)
0 diff
(100 %id)
T64489 lung .i 2170 to 2347 177 to 1   fully sequenced,   177/177
(100 %)
1 diff
(99.5 %id)
BF476295 Prostate .j-u 45 to 548 504 to 1   tiling clone,   504/504
(100 %)
5 diff
(99.1 %id)
BQ063669 lymph, lymphoma, cell line .k 1 to 970 1 to 988 Q73H V125X C147W H148P E152R ... tiling clone,   988/1039
(95 %)
38 diff
(96.4 %id)
BC014085 Placenta, choriocarcinoma .l 1 to 783 1 to 783 S115R tiling clone, available from MGC, AAA   783/2078
(37 %)
9 diff
(99.6 %id)
AA079177   .l 439 to 666 4 to 235   tiling clone, fully sequenced,   232/235
(98 %)
8 diff
(96.6 %id)
DB152644 thymus .l 536 to 1126 2 to 599   tiling clone, capped   598/598
(100 %)
7 diff
(98.9 %id)
AA079178   .l 632 to 773 142 to 1   fully sequenced,   142/142
(100 %)
3 diff
(97.9 %id)
DB030908 testis .m 1 to 552 2 to 553 exact tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
DA449812 tongue, tumor tissue .n 1 to 574 2 to 575 R3H R55Q tiling clone, capped   574/574
(100 %)
3 diff
(99.5 %id)
DB443167.
matches multiple genes
testis .o 1 to 481 1 to 481 exact tiling clone, also hits gene namoma 481/481
(100 %)
0 diff
(100 %id)
BG236007 blood, lymphocyte .o 258 to 796 553 to 15   tiling clone, AAA   539/539
(100 %)
1 diff
(99.9 %id)
BC038531 Brain, adult medulla .p 1 to 399 1 to 399   tiling clone, available from MGC, AAA   399/399
(100 %)
0 diff
(100 %id)
BI830259 brain, medulla .p 1 to 399 1 to 398   available from MGC, AAA   398/398
(100 %)
1 diff
(99.8 %id)
TI_57171015   .p 1 to 399 30 to 427   AAA   398/427
(93 %)
7 diff
(98.4 %id)
DB092733 testis .p 22 to 574 2 to 554 exact tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DB069378 testis .q 1 to 532 2 to 533 exact tiling clone, capped   532/532
(100 %)
0 diff
(100 %id)
DA619098   .r 1 to 524 2 to 526 exact tiling clone, capped   525/525
(100 %)
1 diff
(99.9 %id)
DA788951 brain .s 1 to 430 2 to 434 P58L tiling clone, capped   433/433
(100 %)
4 diff
(99.1 %id)
AW884103 ovary .t-u 1 to 339 11 to 349 Y5H tiling clone,   339/354
(95 %)
3 diff
(99.2 %id)
DB151152 thymus .u-u 1 to 273 2 to 274 exact tiling clone, capped   273/273
(100 %)
0 diff
(100 %id)
AW025140 Kidney .va 1 to 252 258 to 1 exact tiling clone,   255/258
(98 %)
0 diff
(100 %id)
AV707501 adrenal gland Gene ZNF490_, variant not shown         Suspected internal deletion, this clone was ignored    
AV732939 pheochromocytoma Gene ZNF490_, variant not shown         Suspected internal deletion, this clone was ignored    
BX951790   Gene ZNF490_, variant not shown         This clone was ignored    
DA978223 synovial membrane tissue from rheumatioidarthritis Gene ZNF490_, variant not shown       capped This clone was ignored    
DB104051 thymus Gene ZNF490_, variant not shown       capped Suspected internal deletion, this clone was ignored    
AK299532 brain Gene ZNF490_, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1971558493   Gene ZNF490_, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
TI_1971558823   Gene ZNF490_, variant not shown         Suspected internal deletion, this clone was ignored    
BG180223 adenocarcinoma, cell line, Prostate Gene ZNF490_, variant not shown         Suspected internal deletion, this clone was ignored    
BC036481 Brain, hippocampus Gene ZNF490_, variant not shown       available from MGC, AAA This clone was ignored    
BI548573 brain, hippocampus Gene ZNF490_, variant not shown       available from MGC, This clone was ignored    
BQ716213 sympathetic trunk Gene ZNF490_, variant not shown              
TI_44167075   Gene ZNF490_, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u-u, .va Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI