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Gene ZNF449TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
103 supporting clones for gene ZNF449 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY927619   .a 1 to 725 64 to 788   tiling clone,   725/788
(92 %)
1 diff
(99.9 %id)
NM_152695.5   .a 25 to 4083 1 to 4059 exact RefSeq,   4059/4059
(100 %)
0 diff
(100 %id)
DA319333 hippocampus .a 26 to 601 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA246900 brain .a 28 to 610 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DN991294 brain, whole brain .a 33 to 614 8 to 589       582/589
(98 %)
0 diff
(100 %id)
DA119577 cerebellum .a 40 to 576 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB450788 testis .a 41 to 524 1 to 485       485/485
(100 %)
3 diff
(99.4 %id)
DB456864 testis .a 41 to 529 1 to 489       489/490
(99 %)
2 diff
(99.6 %id)
AK314344   .a 48 to 1746 1 to 1699 I344T     1699/1699
(100 %)
1 diff
(100.0 %id)
AL833407 human adipose .a 49 to 3822 1 to 3774 M124I G187V P293L available from DKFZ, AAA   3774/3774
(100 %)
7 diff
(99.9 %id)
AY280801   .a 49 to 4083 1 to 4035 M124I G187V P293L tiling clone,   4035/4035
(100 %)
7 diff
(99.9 %id)
DA313988 hippocampus .a 49 to 593 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA757158   .a 49 to 605 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB214440 trachea .a 49 to 606 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BC060768 Placenta, normal .a 50 to 3815 1 to 3768 exact tiling clone, available from MGC, AAA   3768/3768
(100 %)
2 diff
(100.0 %id)
CD109972 Human Placenta, placenta .a 50 to 669 28 to 649       622/803
(77 %)
12 diff
(98.6 %id)
CD109963 Human Placenta, placenta .a 50 to 556 28 to 536       509/853
(59 %)
10 diff
(98.9 %id)
CF993810 Human Placenta, placenta .a 57 to 800 29 to 783       754/869
(86 %)
22 diff
(97.5 %id)
DA497555 brain .a 60 to 636 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB454899 testis .a 60 to 558 1 to 499       499/499
(100 %)
0 diff
(100 %id)
BP365989 lung .a 60 to 651 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
DA857123 placenta .a 61 to 617 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB277435 uterus .a 61 to 577 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DB282897 uterus .a 61 to 642 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
BU934497 mixed (pool of 40 RNAs) .a 63 to 408 1 to 352   available from MGC,   352/833
(42 %)
10 diff
(98.8 %id)
AL833109 human heart .a 67 to 3813 1 to 3748 R483G available from DKFZ, AAA   3748/3748
(100 %)
4 diff
(99.9 %id)
BY795474 eye .a 69 to 686 1 to 618       618/618
(100 %)
0 diff
(100 %id)
DA991439 synovial membrane tissue from rheumatioidarthritis .a 76 to 614 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA240229 brain .a 85 to 677 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DN990424 brain, whole brain .a 92 to 840 1 to 749       749/749
(100 %)
6 diff
(99.2 %id)
TI_1948209426   .a 181 to 666 125 to 611       487/1226
(39 %)
7 diff
(99.5 %id)
TI_1948233653   .a 181 to 546 123 to 487       365/1448
(25 %)
10 diff
(99.4 %id)
EL734069 mixed .a 190 to 817 1 to 628       628/628
(100 %)
0 diff
(100 %id)
BX281842   .a 210 to 699 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
BE042709 colon, moderately-differentiated adenocarcinoma .a 286 to 694 409 to 1       409/409
(100 %)
15 diff
(96.4 %id)
BE042720 colon, moderately-differentiated adenocarcinoma .a 286 to 694 408 to 1       408/408
(100 %)
1 diff
(99.8 %id)
BE042746 colon, moderately-differentiated adenocarcinoma .a 289 to 694 406 to 1       406/406
(100 %)
18 diff
(95.6 %id)
BE042775 colon, moderately-differentiated adenocarcinoma .a 370 to 694 324 to 1       324/324
(100 %)
2 diff
(99.4 %id)
TI_1948209742   .a 754 to 1745 1121 to 126       996/1288
(77 %)
20 diff
(98.5 %id)
TI_1948209586   .a 865 to 1745 1002 to 124       879/1294
(67 %)
0 diff
(100 %id)
AL832169 human cervix .a 904 to 3815 1 to 2911   available from DKFZ, AAA   2911/2911
(100 %)
2 diff
(100.0 %id)
TI_1948209896   .a 907 to 1745 975 to 127       849/1412
(60 %)
0 diff
(100 %id)
TI_1948209427   .a 949 to 1745 928 to 124       805/1293
(62 %)
0 diff
(100 %id)
CF137473 lymph .a 1226 to 1681 1 to 456       456/456
(100 %)
2 diff
(99.6 %id)
TI_154166928   .a 1233 to 1701 81 to 549       469/469
(100 %)
0 diff
(100 %id)
AV727702 hypothalamus .a 1238 to 1963 1 to 710       710/734
(96 %)
28 diff
(96.2 %id)
AI381234   .a 1248 to 1474 227 to 1       227/227
(100 %)
0 diff
(100 %id)
DA511204 brain .a 1503 to 2060 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA524427 brain .a 1589 to 2024 2 to 446   capped   445/445
(100 %)
10 diff
(97.8 %id)
AA337882 endometrium .a 1609 to 1872 1 to 265       265/268
(98 %)
2 diff
(99.3 %id)
CD652858 Embryonic Stem cells .a 1649 to 2346 13 to 702       690/801
(86 %)
13 diff
(98.4 %id)
CN358000 embryonic stem cells, DMSO-treated H9 cellline .a 1725 to 2234 1 to 512       512/512
(100 %)
1 diff
(99.9 %id)
CD104748 Pooled-Skin .a 1778 to 2413 1 to 646       646/812
(79 %)
14 diff
(98.3 %id)
BP204847 coronary artery .a 1868 to 2452 1 to 585   tiling clone,   585/585
(100 %)
0 diff
(100 %id)
CD557359 testis .a 1878 to 2732 28 to 888       861/893
(96 %)
13 diff
(98.6 %id)
AK002078 placenta .a 1983 to 3815 1 to 1833   available from FLJ,   1833/1833
(100 %)
2 diff
(99.9 %id)
AU138172 placenta .a 1984 to 2761 2 to 786   capped   785/786
(99 %)
12 diff
(98.5 %id)
BP377560 uterus .a 1990 to 2569 1 to 583       583/583
(100 %)
7 diff
(98.8 %id)
BE144556 head_neck .a 2256 to 2720 1 to 462       462/462
(100 %)
13 diff
(97.2 %id)
BE881973 leiomyosarcoma, uterus .a 2432 to 3036 1 to 617       617/936
(65 %)
29 diff
(97.0 %id)
BF734942 amnion_normal .a 2470 to 2828 35 to 395       361/395
(91 %)
0 diff
(100 %id)
BF735228 amnion_normal .a 2470 to 2865 4 to 399       396/399
(99 %)
0 diff
(100 %id)
BQ292319 amnion_normal .a 2513 to 2848 50 to 391       342/391
(87 %)
0 diff
(100 %id)
BF734997 amnion_normal .a 2756 to 3118 366 to 4     Submitted on the opposite strand 363/366
(99 %)
0 diff
(100 %id)
BF576391 muscle (skeletal) .a 2828 to 3312 1 to 485       485/486
(99 %)
1 diff
(99.8 %id)
BQ773777 Chondrosarcoma Grade II, Left Pelvis .a 3092 to 3813 741 to 20   AAA   722/722
(100 %)
0 diff
(100 %id)
CN358001 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3183 to 3518 13 to 348       336/348
(96 %)
0 diff
(100 %id)
R66820 placenta .a 3197 to 3631 1 to 436   fully sequenced,   436/436
(100 %)
17 diff
(96.2 %id)
BX095255 placenta .a 3198 to 3885 1 to 687       687/687
(100 %)
2 diff
(99.8 %id)
BQ709402 Spleen .a 3213 to 4083 1 to 874       874/875
(99 %)
8 diff
(99.1 %id)
AI888786 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3253 to 3813 565 to 5       561/565
(99 %)
0 diff
(100 %id)
AU157499 placenta .a 3257 to 3815 558 to 1       558/562
(99 %)
4 diff
(99.3 %id)
DB317383 brain .a 3286 to 3814 532 to 1       532/532
(100 %)
5 diff
(99.1 %id)
BF055099 pooled .a 3318 to 3822 510 to 6       505/510
(99 %)
0 diff
(100 %id)
DB522297 testis .a 3340 to 3811 1 to 472     Submitted on the opposite strand 472/474
(99 %)
1 diff
(99.8 %id)
DB520308 testis .a 3362 to 3815 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
BF195744 Kidney .a 3377 to 3815 440 to 2       439/440
(99 %)
0 diff
(100 %id)
DB516257 testis .a 3385 to 3811 1 to 425     Submitted on the opposite strand 425/427
(99 %)
8 diff
(98.2 %id)
AI263612   .a 3419 to 3822 409 to 6       404/409
(98 %)
0 diff
(100 %id)
AA135670 uterus .a 3475 to 3787 315 to 1       315/315
(100 %)
2 diff
(99.4 %id)
AI686433 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3518 to 3813 302 to 7       296/302
(98 %)
0 diff
(100 %id)
AI369994   .a 3529 to 3822 299 to 6       294/299
(98 %)
0 diff
(100 %id)
R67918 placenta .a 3601 to 3943 345 to 1   fully sequenced,   345/345
(100 %)
11 diff
(96.9 %id)
FN157147 breast carcinoma .a 3754 to 3815 66 to 5     Submitted on the opposite strand 62/66
(93 %)
0 diff
(100 %id)
BC065938 Pooled, 40 cell lines .b 1 to 3834 5 to 3838 G367W tiling clone, available from MGC, AAA   3834/3834
(100 %)
2 diff
(100.0 %id)
TI_1948233500   .b 116 to 511 133 to 527       395/755
(52 %)
3 diff
(99.7 %id)
EL736630 mixed .b 125 to 511 1 to 387       387/435
(88 %)
6 diff
(98.7 %id)
BX537604 human fetal kidney .c 1 to 4550 1 to 4550 exact tiling clone, available from DKFZ, AAA   4550/4550
(100 %)
4 diff
(100.0 %id)
DA212657 brain .c 1041 to 1581 2 to 542   tiling clone, capped   541/541
(100 %)
1 diff
(99.9 %id)
DB304500 brain .c 4037 to 4549 513 to 1       513/513
(100 %)
0 diff
(100 %id)
AY927532   .d 1 to 358 359 to 2   tiling clone, Submitted on the opposite strand 358/360
(99 %)
1 diff
(99.8 %id)
DA336659 hippocampus .d 257 to 836 2 to 582   tiling clone, capped   581/581
(100 %)
2 diff
(99.7 %id)
CN304250 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1 to 745 1 to 746 V130G N135E A136C L137S Q138P ... tiling clone,   746/746
(100 %)
2 diff
(99.8 %id)
DA109024 cerebellum .e 48 to 644 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
BP381609 adipose tissue .f 1 to 612 2 to 613       613/613
(100 %)
0 diff
(100 %id)
AK074194 adipose tissue .f 1 to 2037 2 to 2038 exact tiling clone, available from FLJ, AAA   2038/2038
(100 %)
2 diff
(100.0 %id)
DA854266 placenta .f 11 to 605 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DA220911 brain .f 20 to 538 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DR006153 Prostate .f 95 to 574 1 to 480       480/480
(100 %)
0 diff
(100 %id)
AI207013 pooled germ cell tumors .f 379 to 875 496 to 1       496/499
(99 %)
8 diff
(98.4 %id)
AI982599 pooled germ cell tumors .f 483 to 871 389 to 1       389/389
(100 %)
3 diff
(99.3 %id)
AV685516 hepatocellular carcinoma .f 935 to 1259 1 to 320       320/332
(96 %)
16 diff
(95.2 %id)
BX499720 Liver .f 1387 to 2144 1 to 757   tiling clone,   757/757
(100 %)
1 diff
(99.9 %id)
AY927531   .g 1 to 1581 1 to 1581 exact tiling clone,   1581/1581
(100 %)
0 diff
(100 %id)
AY927530   .g 813 to 1592 1 to 781 exact tiling clone,   781/844
(92 %)
9 diff
(99.0 %id)
AW084686 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .h-u 1 to 471 471 to 1 exact tiling clone,   471/471
(100 %)
2 diff
(99.6 %id)
AV683466 hepatocellular carcinoma Gene ZNF449, variant not shown         Suspected internal deletion, this clone was ignored    
CB856465 anterior tongue, pooled Gene ZNF449, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
CB856466 anterior tongue, pooled Gene ZNF449, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C