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Gene ZNF404TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
28 supporting clones for gene ZNF404 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK300120 placenta .a 1 to 1803 1 to 1803 G303S G429S tiling clone, AAA   1803/1803
(100 %)
3 diff
(99.9 %id)
DC424621 placenta .a 1 to 808 1 to 806       806/806
(100 %)
16 diff
(98.1 %id)
BC101332 PCR rescued clones .a 51 to 1753 1 to 1703 H199Y G303S     1703/1703
(100 %)
3 diff
(99.9 %id)
BC101333 PCR rescued clones .a 53 to 1753 9 to 1709 G303S tiling clone,   1701/1709
(99 %)
7 diff
(99.6 %id)
NM_001033719.2   .a 53 to 1894 9 to 1850 exact RefSeq, AAA   1842/1850
(99 %)
6 diff
(99.7 %id)
AY166785   .a 101 to 431 1 to 331       331/331
(100 %)
0 diff
(100 %id)
AA084272   .a 204 to 493 1 to 294       294/314
(93 %)
6 diff
(98.1 %id)
BU102035   .a 284 to 949 1 to 666       666/666
(100 %)
1 diff
(99.9 %id)
BP424453 small intestine .a 569 to 1047 1 to 481     Submitted on the opposite strand 481/481
(100 %)
5 diff
(99.0 %id)
BU102036   .a 997 to 1781 787 to 1       787/789
(99 %)
5 diff
(99.4 %id)
BX102243 multiple sclerosis lesions .a 1116 to 1878 1 to 763       763/763
(100 %)
1 diff
(99.9 %id)
N47183 multiple sclerosis lesions .a 1119 to 1397 1 to 279   fully sequenced,   279/279
(100 %)
1 diff
(99.7 %id)
TI_154041016   .a 1122 to 1891 850 to 85   AAA   766/934
(82 %)
44 diff
(95.3 %id)
TI_149281763   .a 1189 to 1891 798 to 96   AAA   703/703
(100 %)
1 diff
(99.9 %id)
DC427399 placenta .a 1209 to 1803 600 to 12   AAA   589/594
(99 %)
24 diff
(96.0 %id)
BU679713 lung .a 1210 to 1891 700 to 19   AAA   682/682
(100 %)
1 diff
(99.9 %id)
BQ188692 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1309 to 1894 1 to 586   AAA   586/586
(100 %)
0 diff
(100 %id)
TI_151733033   .a 1309 to 1894 661 to 76   AAA   586/970
(60 %)
0 diff
(100 %id)
AI016606   .a 1355 to 1893 541 to 3       539/541
(99 %)
0 diff
(100 %id)
AA476564   .a 1356 to 1871 1 to 515       515/515
(100 %)
2 diff
(99.7 %id)
N46863 multiple sclerosis lesions .a 1367 to 1891 533 to 1   fully sequenced,   533/533
(100 %)
19 diff
(96.5 %id)
BM722012 eye, fetal eye .a 1467 to 1891 1 to 425   fully sequenced, AAA   425/425
(100 %)
4 diff
(99.1 %id)
AI439181 lymph node, lymphoma, follicular mixed small and largecell .a 1469 to 1893 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
AI932531 adenocarcinoma, Pancreas .a 1488 to 1895 410 to 2       409/410
(99 %)
0 diff
(100 %id)
D45490 lung .a 1566 to 1893 1 to 327     Submitted on the opposite strand 327/328
(99 %)
3 diff
(99.1 %id)
AA084273   .a 1588 to 1891 336 to 31       306/348
(87 %)
0 diff
(100 %id)
BM678525 eye, fetal eye .a 1660 to 1891 250 to 19   fully sequenced, AAA   232/232
(100 %)
0 diff
(100 %id)
DA947759 Spleen .b 1 to 573 2 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
T41338   .b 264 to 629 25 to 385   tiling clone,   361/385
(93 %)
6 diff
(98.5 %id)
DB333610 Spleen .b 1246 to 1803 558 to 1 exact tiling clone,   558/558
(100 %)
0 diff
(100 %id)
DB312676 thalamus Gene ZNF404, variant not shown         This clone was ignored    
DA414130 thalamus Gene ZNF404, variant not shown       capped This clone was ignored    
DB322166.
matches multiple genes
esophagus Gene stysaw, variant not shown         This clone was ignored, also hits gene stysaw    
DB322166.
matches multiple genes
esophagus Gene ZNF404, variant not shown         This clone was ignored, also hits gene stysaw    
DA667868.
matches multiple genes
esophagus Gene stysaw, variant not shown       capped This clone was ignored, also hits gene stysaw    
DA667868.
matches multiple genes
esophagus Gene ZNF404, variant not shown       capped This clone was ignored, also hits gene stysaw    
CD724116 eye, lacrimal gland Gene ZNF404, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C