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Gene ZNF333TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
148 supporting clones for gene ZNF333 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA673913   .a -11 to 580 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DA262376 caudate nucleus .a -9 to 475 2 to 487   capped   486/486
(100 %)
1 diff
(99.8 %id)
BM543912 ovary (pool of 3) .a 1 to 550 20 to 572   available from MGC,   561/1287
(43 %)
12 diff
(99.1 %id)
CR747359 ovary (pool of 3) .a 1 to 502 8 to 509       509/509
(100 %)
2 diff
(99.7 %id)
NM_032433.2   .a 1 to 3760 8 to 3767 exact RefSeq,   3767/3767
(100 %)
0 diff
(100 %id)
DB276427 uterus .a 1 to 519 8 to 526   capped   525/525
(100 %)
2 diff
(99.7 %id)
DA811548 brain .a 1 to 557 6 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA108806 cerebellum .a 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
BX647475 colon endothel, primary cell culture .a 33 to 3758 1 to 3726 Q111R L194P S270P C536R available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 3726/3726
(100 %)
5 diff
(99.9 %id)
AF372702   .a 37 to 4696 1 to 4661 exact tiling clone,   4661/4661
(100 %)
1 diff
(100.0 %id)
DA099647 cerebellum .a 87 to 544 103 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA103403 cerebellum .a 87 to 523 112 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA311799 hippocampus .a 87 to 470 106 to 489   capped   488/488
(100 %)
5 diff
(99.0 %id)
DA990625 synovial membrane tissue from rheumatioidarthritis .a 87 to 531 103 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DB232776 trachea .a 87 to 537 105 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BQ940643 brain, neuroblastoma, cell line .a 392 to 1237 1 to 860       860/886
(97 %)
26 diff
(97.1 %id)
BG984708 colon_normal .a 711 to 1161 10 to 463       454/470
(96 %)
19 diff
(96.0 %id)
AK095142 substantia nigra .a 1112 to 3758 1 to 2646   available from FLJ,   2646/2646
(100 %)
3 diff
(99.9 %id)
DA344306 substantia nigra .a 1113 to 1699 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA376656 thalamus .a 1113 to 1659 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA948845 Spleen .a 1191 to 1748 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BF365485 nervous_tumor .a 1456 to 1612 160 to 1       160/189
(84 %)
8 diff
(95.8 %id)
DB516248 testis .a 1529 to 2235 1 to 704   AAA Submitted on the opposite strand 704/704
(100 %)
15 diff
(97.9 %id)
CN365656 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1786 to 2350 8 to 572       565/572
(98 %)
6 diff
(99.0 %id)
CN365657 embryonic stem cells, cell lines H1, H7, andH9 .a 1856 to 2454 1 to 599       599/599
(100 %)
2 diff
(99.7 %id)
F12605 brain, total brain .a 1954 to 2265 1 to 312       312/312
(100 %)
0 diff
(100 %id)
AI037928   .a 1958 to 2535 582 to 5       578/585
(98 %)
0 diff
(100 %id)
T74018 whole brain .a 1969 to 2323 1 to 359     Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 359/362
(99 %)
11 diff
(97.0 %id)
AI758395 Kidney .a 2105 to 2534 444 to 15   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 430/430
(100 %)
1 diff
(99.8 %id)
CV802745 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2128 to 2840 1 to 704       704/833
(84 %)
16 diff
(98.1 %id)
AI803470 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2374 to 2750 17 to 393     Submitted on the opposite strand 377/393
(95 %)
6 diff
(98.5 %id)
CD673070 eye, Iris .a 2596 to 3233 1 to 638       638/638
(100 %)
1 diff
(99.9 %id)
BX281302 pooled lung and spleen .a 2963 to 3493 1 to 531       531/531
(100 %)
0 diff
(100 %id)
BI767437 pooled lung and spleen .a 2963 to 3706 1 to 746       746/746
(100 %)
3 diff
(99.6 %id)
TI_57181377   .a 2963 to 3706 68 to 813       746/813
(91 %)
6 diff
(99.3 %id)
AA284895 ovarian tumor, ovary .a 3178 to 3624 1 to 447       447/451
(99 %)
1 diff
(99.8 %id)
CR748783   .a 3180 to 3739 1 to 560       560/560
(100 %)
2 diff
(99.7 %id)
DB310202 substantia nigra .a 3224 to 3758 534 to 1       534/534
(100 %)
3 diff
(99.5 %id)
BE768978 prostate_tumor .a 3235 to 3664 1 to 429       429/429
(100 %)
6 diff
(98.7 %id)
AA833718   .a 3251 to 3758 518 to 12   AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 507/507
(100 %)
1 diff
(99.9 %id)
AW873521 pooled .a 3280 to 3760 484 to 4       481/484
(99 %)
0 diff
(100 %id)
BG742556 skin .a 3315 to 4086 1 to 771       771/877
(87 %)
7 diff
(99.3 %id)
T87619 whole brain .a 3389 to 3741 370 to 11   AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 360/404
(89 %)
12 diff
(97.1 %id)
F10223 brain, total brain .a 3537 to 3741 205 to 1       205/205
(100 %)
0 diff
(100 %id)
AI701610 Kidney .a 3581 to 3748 169 to 2       168/169
(99 %)
0 diff
(100 %id)
BX103379 carcinoid, lung .a 4080 to 4693 626 to 15   AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 612/618
(99 %)
4 diff
(99.4 %id)
BM987049 mixed .a 4088 to 4598 1 to 511     Submitted on the opposite strand 511/511
(100 %)
0 diff
(100 %id)
AW673000 cervical carcinoma cell line, cervix .a 4096 to 4363 1 to 268     Submitted on the opposite strand 268/268
(100 %)
2 diff
(99.3 %id)
TI_154024128   .a 4099 to 4707 737 to 129   AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 609/670
(90 %)
15 diff
(97.8 %id)
BE673647 carcinoid, lung .a 4101 to 4641 1 to 541     Submitted on the opposite strand 541/541
(100 %)
0 diff
(100 %id)
BF110328 carcinoid, lung .a 4101 to 4650 1 to 550   tiling clone, Submitted on the opposite strand 550/550
(100 %)
0 diff
(100 %id)
BG149482 carcinoid, lung .a 4104 to 4680 1 to 576     Submitted on the opposite strand 576/576
(100 %)
3 diff
(99.5 %id)
AA975466 carcinoid, lung .a 4105 to 4532 1 to 428     Submitted on the opposite strand 428/428
(100 %)
1 diff
(99.8 %id)
AI733158 carcinoid, lung .a 4105 to 4546 1 to 442     Submitted on the opposite strand 442/442
(100 %)
0 diff
(100 %id)
AI279806 carcinoid, lung .a 4105 to 4659 1 to 555     Submitted on the opposite strand 555/555
(100 %)
0 diff
(100 %id)
AA932168 carcinoid, lung .a 4106 to 4446 1 to 341     Submitted on the opposite strand 341/341
(100 %)
2 diff
(99.5 %id)
AI733295 carcinoid, lung .a 4106 to 4635 1 to 530     Submitted on the opposite strand 530/530
(100 %)
3 diff
(99.5 %id)
AI307687 2 pooled tumors (clear cell type), Kidney .a 4106 to 4491 1 to 386     Submitted on the opposite strand 386/386
(100 %)
0 diff
(100 %id)
AI681732 carcinoid, lung .a 4106 to 4514 1 to 409     Submitted on the opposite strand 409/409
(100 %)
3 diff
(99.3 %id)
CA439455 lung, Lung Focal Fibrosis .a 4112 to 4707 614 to 19   AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 596/596
(100 %)
12 diff
(98.0 %id)
AI793086 carcinoid, lung .a 4141 to 4693 561 to 9     Submitted on the opposite strand 553/561
(98 %)
0 diff
(100 %id)
AI793323 carcinoid, lung .a 4168 to 4694 527 to 1     Submitted on the opposite strand 527/527
(100 %)
2 diff
(99.7 %id)
BG152873 Prostate .a 4195 to 4377 183 to 1       183/183
(100 %)
1 diff
(99.5 %id)
AK054916 cerebellum .a 4452 to 6149 1 to 1698   tiling clone, available from FLJ,   1698/1698
(100 %)
10 diff
(99.5 %id)
DA059615 cerebellum .a 4453 to 5007 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BU752957 placenta .a 4489 to 4693 222 to 18   AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 205/214
(95 %)
0 diff
(100 %id)
CB270506 adipose .a 4589 to 5099 1 to 510       510/510
(100 %)
1 diff
(99.9 %id)
AA343795 gall bladder .a 4726 to 5028 1 to 303       303/303
(100 %)
0 diff
(100 %id)
DB296882 cerebellum .a 5600 to 6149 550 to 1       550/554
(99 %)
10 diff
(98.2 %id)
AA502604 colon .a 5900 to 6149 258 to 9       250/258
(96 %)
0 diff
(100 %id)
AK094028 uterus .b 1 to 2783 2 to 2784 exact tiling clone, available from FLJ,   2784/2784
(100 %)
2 diff
(100.0 %id)
AX748419   .b 1 to 2783 2 to 2784 exact     2784/2784
(100 %)
2 diff
(100.0 %id)
DB254859 uterus .b 1 to 561 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB351344 uterus .b 2257 to 2783 527 to 1       527/527
(100 %)
0 diff
(100 %id)
AK291471 brain .c 1 to 1151 1 to 1151   tiling clone,   1151/1151
(100 %)
2 diff
(99.9 %id)
AL832544 brain .c 1131 to 4381 1 to 3252 A391V tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 3252/3252
(100 %)
8 diff
(99.8 %id)
BF927341 nervous_tumor .d 1 to 370 369 to 4   tiling clone, Submitted on the opposite strand 366/369
(99 %)
0 diff
(100 %id)
BE000132 breast_normal .d 98 to 202 113 to 10   tiling clone, Submitted on the opposite strand 104/113
(92 %)
0 diff
(100 %id)
AK122817 cerebellum .d 163 to 3035 1 to 2873 exact tiling clone, available from FLJ,   2873/2873
(100 %)
1 diff
(100.0 %id)
DA083442 cerebellum .d 164 to 645 2 to 483   capped   482/482
(100 %)
0 diff
(100 %id)
AB058709 brain .d 730 to 3808 1 to 3079 exact tiling clone, available from KIAA,   3079/3079
(100 %)
0 diff
(100 %id)
DB298009 cerebellum .d 2655 to 3035 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AK309208 thalamus .e 1 to 1377 2 to 1378 K212R Y282C tiling clone,   1378/1378
(100 %)
2 diff
(99.9 %id)
BI035922 nervous_tumor .e 633 to 1014 1 to 382   tiling clone,   382/383
(99 %)
3 diff
(99.3 %id)
BC048107 testis .f 1 to 3594 1 to 3594 S115P tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 3594/3594
(100 %)
5 diff
(99.9 %id)
DR002394 fetal brain .f 5 to 823 1 to 823       823/832
(98 %)
27 diff
(96.8 %id)
CN414093 embryonic stem cells, cell lines H1, H7, andH9 .f 20 to 667 1 to 648       648/648
(100 %)
3 diff
(99.6 %id)
DA398612 thalamus .f 26 to 580 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA401873 thalamus .f 39 to 604 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AW157012 brain, frontal lobe .f 47 to 499 453 to 1       453/453
(100 %)
0 diff
(100 %id)
DA665918   .f 49 to 584 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
EL737124 mixed .f 124 to 750 1 to 627       627/627
(100 %)
1 diff
(99.9 %id)
TI_1948229720   .f 126 to 1029 137 to 1035   fully sequenced,   899/1035
(86 %)
33 diff
(96.9 %id)
TI_1948229883   .f 126 to 577 141 to 592   fully sequenced,   452/592
(76 %)
7 diff
(98.9 %id)
TI_1948230041   .f 126 to 577 137 to 588   fully sequenced,   452/588
(76 %)
9 diff
(98.5 %id)
TI_1948230193   .f 126 to 1023 141 to 1028   fully sequenced,   892/1032
(86 %)
33 diff
(96.9 %id)
DA135910 alzheimer cortex .f 162 to 712 2 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
TI_1948229884   .f 516 to 1034 640 to 122   fully sequenced,   519/640
(81 %)
0 diff
(100 %id)
TI_1948230042   .f 516 to 1034 644 to 126   fully sequenced,   519/644
(80 %)
0 diff
(100 %id)
TI_1948230194   .f 516 to 1024 645 to 137   fully sequenced,   509/645
(78 %)
0 diff
(100 %id)
TI_1948229721   .f 604 to 1034 554 to 124   fully sequenced,   431/554
(77 %)
0 diff
(100 %id)
BI025233 marrow .f 1049 to 1397 1 to 352       352/368
(95 %)
9 diff
(97.6 %id)
TI_151729246   .f 1977 to 2594 701 to 84   AAA Possibly primed on the genome, locally A rich (19/23 A in genome downstream of last aligned base) 618/956
(64 %)
18 diff
(98.2 %id)
H44695 breast .f 2392 to 2757 1 to 378       378/381
(99 %)
21 diff
(94.5 %id)
H27928 breast .f 2447 to 2715 1 to 270       270/270
(100 %)
4 diff
(98.6 %id)
BF756262 colon .f 2646 to 3100 28 to 481   tiling clone,   454/481
(94 %)
6 diff
(98.8 %id)
BF756554 colon .f 2646 to 3025 13 to 391       379/391
(96 %)
4 diff
(99.0 %id)
H43635 breast .f 3184 to 3580 405 to 1       405/416
(97 %)
11 diff
(97.4 %id)
H27929 breast .f 3346 to 3564 218 to 1       218/218
(100 %)
2 diff
(99.1 %id)
AL556025 placenta .g 1 to 669 1 to 672 L24P E46X C67X M71X D73X ... tiling clone, fully sequenced,   672/672
(100 %)
9 diff
(98.7 %id)
AL578385 placenta .g 639 to 1546 935 to 25   tiling clone, fully sequenced,   911/935
(97 %)
6 diff
(99.4 %id)
CR617489 HeLa cells Cot 25-normalized .h 1 to 1392 1 to 1392 exact tiling clone,   1392/1392
(100 %)
0 diff
(100 %id)
DB450782 testis .i 1 to 727 1 to 727 Q101X P135X R151K H161P R162P ... tiling clone,   727/727
(100 %)
6 diff
(99.2 %id)
DC377819 brain .i 15 to 573 1 to 559   tiling clone,   559/559
(100 %)
0 diff
(100 %id)
DA085678 cerebellum .j -10 to 556 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BC064571 Ovary, pooled from 3 adults .j 1 to 1700 8 to 1707 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 1707/1707
(100 %)
5 diff
(99.8 %id)
DA194222 amygdala .j 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA417408 thalamus .j 26 to 579 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA248936 brain .j 28 to 625 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
BU552772 ovary, teratocarcinoma, cell line .j 47 to 957 19 to 941 S172L T173H L174P D175G T176H ... tiling clone,   923/945
(97 %)
28 diff
(97.1 %id)
EL735036 mixed .j 128 to 675 1 to 548       548/669
(81 %)
1 diff
(99.9 %id)
TI_1948214732   .j 130 to 591 135 to 596       462/492
(93 %)
8 diff
(98.4 %id)
TI_1948214906   .j 130 to 675 130 to 675       546/1305
(41 %)
12 diff
(99.1 %id)
TI_1948215078   .j 130 to 675 127 to 672       546/1366
(39 %)
7 diff
(99.5 %id)
TI_1948215254   .j 130 to 674 133 to 677       545/1324
(41 %)
9 diff
(99.4 %id)
BI023984 marrow .j 435 to 571 9 to 144       136/144
(94 %)
10 diff
(93.1 %id)
BX953633   .j 442 to 1163 1 to 724       724/724
(100 %)
5 diff
(99.4 %id)
BX504201   .j 1002 to 1183 1 to 181       181/181
(100 %)
2 diff
(98.9 %id)
EC490620 Prostate .j 1182 to 1268 20 to 105   tiling clone,   86/105
(81 %)
6 diff
(94.3 %id)
AI139999 heart .j 1282 to 1701 420 to 1       420/420
(100 %)
1 diff
(99.8 %id)
R11042.
matches multiple genes
liver and spleen .j 1386 to 1698 314 to 1     also hits gene FAM125B 314/314
(100 %)
5 diff
(98.5 %id)
AA934451 metastatic prostate bone lesion .j 1459 to 1713 254 to 1       254/261
(97 %)
4 diff
(98.5 %id)
DA318224 hippocampus .k -8 to 563 2 to 579 S113A M114W G115E E116K V117L ... tiling clone, capped   578/578
(100 %)
9 diff
(98.5 %id)
DA768091 brain .l 1 to 553 2 to 549 exact tiling clone, capped   548/548
(100 %)
3 diff
(99.5 %id)
BP231733 muscle .m 20 to 601 1 to 582 exact tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DB188606 liver, tumor tissue .m 87 to 480 104 to 497 S96F capped   496/496
(100 %)
3 diff
(99.4 %id)
AA504787   .m 513 to 977 1 to 462   tiling clone,   462/462
(100 %)
4 diff
(99.2 %id)
AA490121   .m 1885 to 2314 430 to 1   tiling clone,   430/430
(100 %)
0 diff
(100 %id)
DA591038 lung .n -8 to 275 2 to 290   tiling clone, capped   289/289
(100 %)
5 diff
(98.3 %id)
AK307147 hippocampus .n 87 to 1113 104 to 1130 exact tiling clone,   1130/1130
(100 %)
4 diff
(99.7 %id)
DC335178 hippocampus .n 87 to 563 104 to 580 exact     580/580
(100 %)
3 diff
(99.5 %id)
DA494178 brain .n 87 to 244 103 to 260   capped   259/259
(100 %)
2 diff
(99.3 %id)
DA800700 brain .n 87 to 521 103 to 536 D21G capped   535/537
(99 %)
4 diff
(99.3 %id)
BC040378 Skin, normal .o 1 to 826 81 to 906 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 826/906
(91 %)
11 diff
(98.8 %id)
BG674444 skin .o 1 to 670 81 to 748 N54T P55H W56G V57W A58P ... available from MGC,   668/748
(89 %)
26 diff
(96.6 %id)
BF684537 leiomyosarcoma cell line, uterus .p-u 1 to 766 1 to 768   tiling clone,   768/776
(98 %)
19 diff
(97.6 %id)
BG338863 leiomyosarcoma cell line, uterus .p-u 1 to 469 1 to 466   available from MGC,   466/467
(99 %)
6 diff
(98.8 %id)
BC012344 Uterus, leiomyosarcoma .p-u 2 to 1255 1 to 1256 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 1256/1256
(100 %)
2 diff
(99.9 %id)
BQ890584 Spleen .p-u 453 to 1262 1 to 812 H19Q     812/839
(96 %)
13 diff
(98.5 %id)
AA587523 gastric tumor, stomach .p-u 482 to 758 276 to 1   tiling clone,   276/276
(100 %)
8 diff
(97.2 %id)
AK123144 cerebellum .p-u 536 to 1824 1 to 1289 R12G I29V tiling clone, available from FLJ,   1289/1908
(67 %)
6 diff
(99.7 %id)
DA083557.
matches multiple genes
cerebellum .p-u 537 to 989 2 to 454 R12G I29V capped also hits gene KLHDC9 453/453
(100 %)
3 diff
(99.4 %id)
BI030591 marrow .p-u 631 to 887 1 to 257       257/257
(100 %)
0 diff
(100 %id)
BI031892 marrow .p-u 631 to 1041 1 to 411 exact     411/411
(100 %)
1 diff
(99.8 %id)
BI031906 marrow .p-u 631 to 1041 1 to 411 exact     411/411
(100 %)
1 diff
(99.8 %id)
BE677411 dorsal root ganglia .p-u 814 to 1256 443 to 1       443/443
(100 %)
0 diff
(100 %id)
CN266654 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .q-u 1 to 633 1 to 633 exact tiling clone,   633/633
(100 %)
2 diff
(99.7 %id)
AA668334   .q-u 254 to 662 408 to 1 G42A W43G K44S K46R I47S ... tiling clone,   408/408
(100 %)
1 diff
(99.8 %id)
R11092.
matches multiple genes
liver and spleen .r-u 1 to 328 1 to 329 G14D P15L A16L A17H C18V ... tiling clone, also hits gene lyjybo 329/329
(100 %)
4 diff
(98.8 %id)
BJ990325 hepatoblastoma Gene ZNF333, variant not shown         This clone was ignored    
BJ990326 hepatoblastoma Gene ZNF333, variant not shown         This clone was ignored    
AI280053 pooled Gene ZNF333, variant not shown         This clone was ignored    
AW188073 pooled Gene ZNF333, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u, .q-u, .r-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C