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Gene ZNF287TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
88 supporting clones for gene ZNF287 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA103127 cerebellum ZNF287.a 1 to 561 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
BG703788 brain, hippocampus ZNF287.a 1 to 696 1 to 694   available from MGC,   694/695
(99 %)
10 diff
(98.6 %id)
BC057791 Brain, hippocampus ZNF287.a 6 to 1490 1 to 1485   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1485/1499
(99 %)
3 diff
(99.8 %id)
NM_020653.2   ZNF287.a 6 to 4283 1 to 4278 exact RefSeq,   4278/4278
(100 %)
0 diff
(100 %id)
DB483179 hippocampus ZNF287.a 8 to 504 1 to 497       497/497
(100 %)
3 diff
(99.4 %id)
BP339969 Spleen ZNF287.a 8 to 586 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DA508096 brain ZNF287.a 9 to 475 2 to 469   capped   468/468
(100 %)
10 diff
(97.9 %id)
DB449403 testis ZNF287.a 14 to 737 1 to 722       722/723
(99 %)
6 diff
(99.2 %id)
DA227594 brain ZNF287.a 18 to 615 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA111460 cerebellum ZNF287.a 35 to 591 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB279912 uterus ZNF287.a 35 to 513 2 to 480   capped   479/479
(100 %)
1 diff
(99.8 %id)
DA124484 cerebellum ZNF287.a 38 to 527 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
DB214490 trachea ZNF287.a 51 to 521 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
AF217227   ZNF287.a 62 to 3203 1 to 3142 exact tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 3142/3142
(100 %)
0 diff
(100 %id)
T66202 whole brain ZNF287.a 67 to 538 1 to 460       460/460
(100 %)
17 diff
(96.4 %id)
BQ065231 lymph, lymphoma, cell line ZNF287.a 69 to 935 1 to 874       874/997
(87 %)
12 diff
(98.8 %id)
N44045 multiple sclerosis lesions ZNF287.a 75 to 314 1 to 237       237/237
(100 %)
10 diff
(95.8 %id)
DB445026 testis ZNF287.a 110 to 536 1 to 427       427/427
(100 %)
0 diff
(100 %id)
CN308513 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 ZNF287.a 275 to 843 1 to 569       569/569
(100 %)
5 diff
(99.2 %id)
TI_927047461   ZNF287.a 379 to 1491 63 to 1169     Submitted on the opposite strand 1107/1304
(84 %)
16 diff
(98.8 %id)
TI_927047607   ZNF287.a 379 to 1496 58 to 1164     Submitted on the opposite strand 1107/1165
(95 %)
19 diff
(98.4 %id)
TI_927047914   ZNF287.a 379 to 1119 745 to 5       741/1229
(60 %)
4 diff
(99.7 %id)
TI_927047915   ZNF287.a 379 to 943 570 to 7       564/1242
(45 %)
4 diff
(99.7 %id)
TI_1243021353   ZNF287.a 380 to 1286 126 to 1030     Submitted on the opposite strand 905/1030
(87 %)
18 diff
(98.3 %id)
TI_1243023257   ZNF287.a 380 to 1440 62 to 1119     Submitted on the opposite strand 1058/1124
(94 %)
22 diff
(98.1 %id)
BC113363 Brain, cerebral cortex, PCR rescued clones ZNF287.a 383 to 2766 1 to 2384 exact     2384/2384
(100 %)
0 diff
(100 %id)
TI_927047913   ZNF287.a 386 to 1510 1125 to 11       1115/1245
(89 %)
8 diff
(99.4 %id)
BC032002 Skin, squamous cell carcinoma ZNF287.a 386 to 1490 1 to 1105   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1105/1142
(96 %)
1 diff
(100.0 %id)
BG678797 skin, squamous cell carcinoma ZNF287.a 386 to 983 1 to 598   available from MGC,   598/598
(100 %)
2 diff
(99.7 %id)
BC101487 Brain, cerebral cortex, PCR rescued clones ZNF287.a 387 to 2758 1 to 2372 exact     2372/2372
(100 %)
0 diff
(100 %id)
CR457194   ZNF287.a 480 to 2744 1 to 2265       2265/2265
(100 %)
0 diff
(100 %id)
TI_1243017877   ZNF287.a 577 to 1738 1 to 1147       1147/1240
(92 %)
20 diff
(98.4 %id)
AW404800 lymph ZNF287.a 642 to 938 18 to 314       297/314
(94 %)
9 diff
(97.2 %id)
TI_927047912   ZNF287.a 750 to 1794 1050 to 9       1042/1232
(84 %)
8 diff
(99.4 %id)
TI_1243022805   ZNF287.a 759 to 1795 1038 to 6       1033/1230
(83 %)
4 diff
(99.7 %id)
CD677577 eye, Trabecular meshwork ZNF287.a 760 to 1387 1 to 628       628/628
(100 %)
0 diff
(100 %id)
CX788819 human embryonic stem cells ZNF287.a 841 to 1490 1 to 650   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 650/672
(96 %)
1 diff
(99.9 %id)
BE501785 Kidney ZNF287.a 939 to 1504 568 to 3       566/568
(99 %)
0 diff
(100 %id)
AI765342 2 pooled tumors (clear cell type), Kidney ZNF287.a 948 to 1490 545 to 4       544/545
(99 %)
1 diff
(99.9 %id)
TI_927047918   ZNF287.a 960 to 2181 1214 to 9       1208/1247
(96 %)
25 diff
(98.0 %id)
AW591875 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors ZNF287.a 981 to 1507 535 to 9   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 527/535
(98 %)
0 diff
(100 %id)
TI_1243017879   ZNF287.a 1013 to 2151 8 to 1138       1131/1259
(89 %)
21 diff
(98.4 %id)
DB552076 hippocampus ZNF287.a 1026 to 1488 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
AU130954   ZNF287.a 1054 to 1920 2 to 868   capped   867/867
(100 %)
10 diff
(98.9 %id)
DB510016 testis ZNF287.a 1062 to 1488 1 to 425     Submitted on the opposite strand 425/425
(100 %)
8 diff
(98.2 %id)
FN112025 breast carcinoma ZNF287.a 1064 to 1127 64 to 1     Submitted on the opposite strand 64/65
(98 %)
0 diff
(100 %id)
BX355898 Placenta Cot 25-normalized ZNF287.a 1132 to 1490 1 to 370       370/370
(100 %)
14 diff
(96.3 %id)
AA770369 pooled ZNF287.a 1159 to 1494 340 to 4       337/340
(99 %)
0 diff
(100 %id)
TI_1243022811   ZNF287.a 1190 to 2369 1179 to 10       1170/1249
(93 %)
0 diff
(100 %id)
TI_927047917   ZNF287.a 1252 to 2372 1123 to 5       1119/1245
(89 %)
0 diff
(100 %id)
AI302995 2 pooled tumors (clear cell type), Kidney ZNF287.a 1290 to 1507 237 to 20   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 218/237
(91 %)
0 diff
(100 %id)
TI_1243017873   ZNF287.a 1322 to 2523 18 to 1205       1188/1270
(93 %)
22 diff
(98.3 %id)
BX390277 Placenta Cot 25-normalized ZNF287.a 1336 to 1490 2 to 157       156/162
(96 %)
6 diff
(96.3 %id)
TI_1243018857   ZNF287.a 1541 to 2776 1266 to 52     Submitted on the opposite strand 1215/1278
(95 %)
0 diff
(100 %id)
TI_1243022873   ZNF287.a 1583 to 2776 1237 to 50     Submitted on the opposite strand 1188/1281
(92 %)
0 diff
(100 %id)
TI_927047460   ZNF287.a 1608 to 2766 1193 to 44     Submitted on the opposite strand 1150/1264
(90 %)
0 diff
(100 %id)
AF027140 brain ZNF287.a 1632 to 1835 1 to 204       204/204
(100 %)
1 diff
(99.6 %id)
TI_927047511   ZNF287.a 1696 to 2766 1119 to 48     Submitted on the opposite strand 1072/1119
(95 %)
0 diff
(100 %id)
DA243946 brain ZNF287.a 1782 to 2372 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
BP375528 uterus ZNF287.a 2507 to 3060 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DA546822   ZNF287.a 2652 to 3222 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
T66138 whole brain ZNF287.a 2920 to 3209 291 to 1       291/291
(100 %)
4 diff
(98.7 %id)
N50226 multiple sclerosis lesions ZNF287.a 2987 to 3224 1 to 242       242/242
(100 %)
4 diff
(98.4 %id)
F09762 brain, total brain ZNF287.a 3002 to 3203 202 to 1       202/202
(100 %)
1 diff
(99.6 %id)
BM685282 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid ZNF287.a 3158 to 3673 534 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 516/525
(98 %)
0 diff
(100 %id)
AJ230816 lung ZNF287.a 3363 to 3674 312 to 1       312/313
(99 %)
0 diff
(100 %id)
TI_149308610   ZNF287.a 3385 to 4283 969 to 89   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 881/945
(93 %)
24 diff
(97.5 %id)
BM979793 lung, Primary Lung Epithelial Cells ZNF287.a 3547 to 4283 755 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 737/737
(100 %)
1 diff
(99.9 %id)
R63548 placenta ZNF287.a 3553 to 3873 1 to 327       327/332
(98 %)
11 diff
(96.7 %id)
DB514422 testis ZNF287.a 3565 to 4283 1 to 719   tiling clone, Submitted on the opposite strand 719/719
(100 %)
12 diff
(98.4 %id)
DB368068   ZNF287.a 3727 to 4275 547 to 1       547/551
(99 %)
10 diff
(98.2 %id)
R63503 placenta ZNF287.a 3904 to 4277 391 to 1       391/418
(93 %)
22 diff
(94.8 %id)
AW026018 Kidney ZNF287.a 3917 to 4275 360 to 1       360/360
(100 %)
4 diff
(98.9 %id)
FN173690 breast carcinoma ZNF287.a 4024 to 4097 1 to 73       73/84
(86 %)
2 diff
(97.7 %id)
N49113 multiple sclerosis lesions ZNF287.a 4057 to 4258 203 to 2       202/203
(99 %)
0 diff
(100 %id)
DA881640   ZNF287.b 1 to 566 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DB330367   ZNF287.b 1960 to 2499 540 to 1   tiling clone,   540/540
(100 %)
0 diff
(100 %id)
AA417844 germinal center B cell ZNF287.c 1 to 304 1 to 304   tiling clone,   304/304
(100 %)
1 diff
(99.7 %id)
AA417757 germinal center B cell ZNF287.c 1386 to 1801 416 to 1   tiling clone,   416/416
(100 %)
0 diff
(100 %id)
BC041159 Colon, Kidney, Stomach, adult, whole pooled ZNF287.d 1 to 1650 1 to 1650 exact tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1650/1711
(96 %)
1 diff
(100.0 %id)
BI764281 pooled colon, kidney, stomach ZNF287.d 1 to 824 1 to 824   available from MGC,   824/824
(100 %)
0 diff
(100 %id)
TI_57148723   ZNF287.d 1 to 824 33 to 856       824/856
(96 %)
6 diff
(99.3 %id)
BP326906 prostata ZNF287.e-u 1 to 580 4 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
BP234743 coronary artery ZNF287.e-u 1 to 581 2 to 582 exact tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DB060942 testis ZNF287.e-u 10 to 534 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
TI_154088755   ZNF287.e-u 133 to 778 61 to 712   tiling clone, Submitted on the opposite strand 652/1249
(52 %)
21 diff
(98.4 %id)
AI830722 2 pooled tumors (clear cell type), Kidney ZNF287.f 1 to 436 438 to 2 S114F V115Y Y116V N117* tiling clone,   437/438
(99 %)
0 diff
(100 %id)
BX472493   ZNF287.g 1 to 580 11 to 591 A21S tiling clone,   589/591
(99 %)
6 diff
(99.0 %id)
Z46024 brain, total brain ZNF287.h-u 1 to 359 1 to 359 exact tiling clone, to resequence,   359/359
(100 %)
0 diff
(100 %id)
Z41639 brain, total brain ZNF287.h-u 1503 to 1800 298 to 1   tiling clone, to resequence,   298/298
(100 %)
0 diff
(100 %id)
AL359578 brain ZNF287.i-u 1 to 1395 1 to 1395 T36A tiling clone, available from DKFZ, AAA   1395/1395
(100 %)
1 diff
(100.0 %id)
BX095331 germinal center B cell ZNF287.j-u 1 to 692 1 to 692   tiling clone,   692/692
(100 %)
0 diff
(100 %id)
ES313685 beard hair, skin ZNF287.j-u 266 to 785 1 to 520 W20V N31I R40K F41I E46X ... tiling clone,   520/520
(100 %)
8 diff
(98.5 %id)
CN308512 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 ZNF287.k 1 to 668 1 to 668 G2R tiling clone,   668/668
(100 %)
4 diff
(99.5 %id)
DR005733 Prostate ZNF287.l 1 to 474 7 to 480 A61L L64W L65V tiling clone,   474/480
(98 %)
6 diff
(98.8 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h-u, .i-u, .j-u, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI