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Gene ZNF273TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
120 supporting clones for gene ZNF273 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_021148.2   .a 1 to 4319 7 to 4325 exact RefSeq,   4325/4325
(100 %)
0 diff
(100 %id)
DA324039 hippocampus .a 1 to 564 2 to 566   tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
DA324061 hippocampus .a 1 to 549 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB245693 uterus, tumor tissue .a 9 to 570 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
BX283885 embryonal carcinoma, testis .a 19 to 344 33 to 359       327/359
(91 %)
6 diff
(98.4 %id)
DA975598 synovial membrane tissue from rheumatioidarthritis .a 22 to 583 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DB057295 testis .a 24 to 559 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA094179 cerebellum .a 27 to 577 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA094186 cerebellum .a 27 to 596 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DB105467 thymus .a 31 to 594 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DN998712 bone marrow .a 83 to 680 6 to 602   tiling clone,   597/603
(99 %)
15 diff
(97.6 %id)
NR_003099.1   .b 1 to 4408 7 to 4414 exact RefSeq, tiling clone,   4414/4414
(100 %)
0 diff
(100 %id)
DA807335 brain .b 1 to 537 7 to 543   capped   542/543
(99 %)
1 diff
(99.9 %id)
DB073146 testis .b 10 to 471 2 to 464   capped   463/463
(100 %)
1 diff
(99.8 %id)
DB278143 uterus .b 10 to 484 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
BG530224 embryonal carcinoma, testis .b 20 to 741 1 to 725       725/813
(89 %)
14 diff
(98.3 %id)
DA781573 brain .b 20 to 588 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
BP283144 bone marrow .b 22 to 603 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA248895 brain .b 25 to 621 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
BX475233   .b 25 to 476 1 to 452       452/452
(100 %)
2 diff
(99.6 %id)
DA806065 brain .b 27 to 589 2 to 564   capped   563/565
(99 %)
2 diff
(99.7 %id)
BP284477 bone marrow .b 28 to 615 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
BU509138 leiomyosarcoma, uterus .b 29 to 908 1 to 884       884/884
(100 %)
16 diff
(98.2 %id)
BC063818 Uterus, leiomyosarcoma .b 41 to 3785 13 to 3785 exact available from MGC, AAA   3773/3773
(100 %)
36 diff
(99.1 %id)
CN365947 embryonic stem cells, cell lines H1, H7, andH9 .b 48 to 487 25 to 464       440/464
(94 %)
6 diff
(98.8 %id)
DR006359 Prostate .b 135 to 628 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
AL832810 lymph node .b 421 to 3786 1 to 3395   available from DKFZ, AAA   3395/3395
(100 %)
32 diff
(99.1 %id)
BC041102 Testis, embryonal carcinoma .b 497 to 3785 1 to 3314   available from MGC, AAA   3314/3314
(100 %)
34 diff
(99.0 %id)
TI_1948231397   .b 853 to 1868 1165 to 130       1036/1397
(74 %)
0 diff
(100 %id)
CN340908 embryonic stem cells, DMSO-treated H9 cellline .b 1066 to 1791 1 to 723       723/723
(100 %)
7 diff
(99.1 %id)
X78932   .b 1121 to 2075 1 to 981       981/981
(100 %)
33 diff
(96.7 %id)
N98899 lung .b 1285 to 1721 1 to 434       434/436
(99 %)
5 diff
(98.9 %id)
BX096072 lung .b 1287 to 1958 1 to 676       676/715
(94 %)
6 diff
(99.2 %id)
AU132789   .b 1342 to 2192 2 to 880   capped   879/882
(99 %)
8 diff
(99.1 %id)
N69908 lung .b 1780 to 2086 337 to 1       337/338
(99 %)
6 diff
(98.3 %id)
CN340909 embryonic stem cells, cell lines H1, H7, andH9 .b 1966 to 2658 37 to 729       693/731
(94 %)
2 diff
(99.8 %id)
CN340907 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2252 to 2581 1 to 330       330/330
(100 %)
0 diff
(100 %id)
DB130903 thymus .b 2465 to 3018 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
CB856648 anterior tongue, pooled .b 2659 to 3131 23 to 495     Submitted on the opposite strand 473/495
(95 %)
6 diff
(98.8 %id)
BX103065 liver and spleen .b 2823 to 3581 1 to 759       759/759
(100 %)
4 diff
(99.5 %id)
R95797 liver and spleen .b 2823 to 3291 1 to 479       479/482
(99 %)
16 diff
(96.7 %id)
BG776464 lung, mucoepidermoid carcinoma .b 3018 to 3678 1 to 663       663/663
(100 %)
12 diff
(98.2 %id)
AV747647 Pituitary .b 3037 to 3524 1 to 485       485/486
(99 %)
10 diff
(98.0 %id)
BG502210 embryonal carcinoma, testis .b 3087 to 3783 1 to 688       688/690
(99 %)
13 diff
(98.2 %id)
AV723589 hypothalamus .b 3185 to 3811 1 to 627       627/636
(98 %)
7 diff
(98.9 %id)
BG060114 brain, glioblastoma without EGFR amplification .b 3278 to 3790 513 to 1       513/513
(100 %)
2 diff
(99.7 %id)
FN139511 breast carcinoma .b 3293 to 3396 106 to 1     Submitted on the opposite strand 106/106
(100 %)
4 diff
(96.3 %id)
AU154250   .b 3298 to 3792 500 to 1       500/501
(99 %)
7 diff
(98.7 %id)
BQ013511 placenta .b 3532 to 3788 278 to 21       258/283
(91 %)
0 diff
(100 %id)
R95752 liver and spleen .b 3580 to 3799 220 to 1       220/222
(99 %)
1 diff
(99.6 %id)
BF239843 bone marrow, from chronic myelogenous leukemia .b 3675 to 4186 246 to 763       518/853
(60 %)
6 diff
(99.3 %id)
BF699476 brain, primitive neuroectoderm .b 3700 to 4393 1 to 688       688/861
(79 %)
26 diff
(97.0 %id)
BE958523 brain, primitive neuroectoderm .b 3720 to 4361 1 to 643       643/679
(94 %)
12 diff
(98.3 %id)
BG532890 embryonal carcinoma, testis .b 3735 to 4458 1 to 719   tiling clone,   719/719
(100 %)
10 diff
(98.7 %id)
BE960931 melanotic melanoma, high MDR, skin .b 3775 to 4378 1 to 595       595/838
(71 %)
13 diff
(98.5 %id)
CB856649 anterior tongue, pooled .b 3781 to 4408 628 to 1     Submitted on the opposite strand 628/628
(100 %)
1 diff
(99.9 %id)
AK090648 cerebellum .c 1 to 3107 2 to 3138 exact tiling clone, available from FLJ,   3138/3138
(100 %)
40 diff
(98.8 %id)
AX746558   .c 1 to 3107 2 to 3138 exact     3138/3138
(100 %)
40 diff
(98.8 %id)
DA054519 cerebellum .c 1 to 558 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA206809 brain .c 21 to 586 2 to 568   tiling clone, capped   567/567
(100 %)
4 diff
(99.3 %id)
DA220329 brain .c 731 to 1292 2 to 562   tiling clone, capped   561/561
(100 %)
9 diff
(98.4 %id)
TI_1948230900   .c 1373 to 2351 130 to 1109       980/1364
(71 %)
46 diff
(96.7 %id)
TI_1948231646   .c 1373 to 2331 120 to 1074       955/1412
(67 %)
35 diff
(97.6 %id)
TI_1948231647   .c 1373 to 2427 125 to 1189       1065/1276
(83 %)
43 diff
(96.7 %id)
EL737031 mixed .c 1377 to 1972 1 to 596       596/596
(100 %)
0 diff
(100 %id)
TI_1948231151   .c 1377 to 2429 139 to 1182       1044/1425
(73 %)
59 diff
(95.9 %id)
BG391074 embryonal carcinoma, cell line, testis .c 1520 to 2178 1 to 657   available from MGC,   657/657
(100 %)
6 diff
(99.1 %id)
BP420445 small intestine .c 1590 to 2036 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
BF508454   .c 1618 to 1782 180 to 15   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 166/180
(92 %)
0 diff
(100 %id)
CD299892 testis .c 1706 to 2351 1 to 658       658/941
(69 %)
19 diff
(98.0 %id)
TI_1948231648   .c 1764 to 2890 1245 to 128       1118/1383
(80 %)
0 diff
(100 %id)
BF749575 breast_normal .c 1774 to 2329 575 to 25     Submitted on the opposite strand 551/577
(95 %)
0 diff
(100 %id)
CK326989 breast_normal .c 1839 to 2328 21 to 512       492/512
(96 %)
6 diff
(98.9 %id)
TI_1948230902   .c 1870 to 2890 1152 to 128       1025/1335
(76 %)
0 diff
(100 %id)
TI_1948231153   .c 1870 to 2890 1156 to 131       1026/1385
(74 %)
0 diff
(100 %id)
CV354427 breast_normal .c 1899 to 2304 101 to 511       411/511
(80 %)
6 diff
(98.9 %id)
BI040062 nervous_tumor .c 1985 to 2330 350 to 2       349/350
(99 %)
0 diff
(100 %id)
DR006245 Prostate .c 2453 to 2980 1 to 531   tiling clone,   531/599
(88 %)
5 diff
(99.2 %id)
BQ005518 Chondrosarcoma, Left Pelvis .c 2583 to 3107 572 to 19   tiling clone, AAA   554/554
(100 %)
33 diff
(94.1 %id)
DB296465 cerebellum .c 2593 to 3107 544 to 1       544/544
(100 %)
32 diff
(94.2 %id)
AW884543 ovary .c 2609 to 2912 303 to 1       303/317
(95 %)
1 diff
(99.7 %id)
CA313963 Human Lung Epithelial cells, lung .c 2611 to 3107 544 to 19   AAA   526/535
(98 %)
6 diff
(98.9 %id)
AA781125   .c 2713 to 3110 433 to 7   tiling clone,   427/433
(98 %)
0 diff
(100 %id)
BG532323 embryonal carcinoma, testis .d 1 to 550 3 to 551 I78X tiling clone,   551/551
(100 %)
3 diff
(99.5 %id)
BG503551 embryonal carcinoma, testis .d 1 to 550 1 to 556 T22S A23S K24*     556/556
(100 %)
13 diff
(97.7 %id)
BU932314 mixed (pool of 40 RNAs) .d 4 to 793 1 to 797 exact tiling clone,   797/798
(99 %)
14 diff
(98.3 %id)
BC008386 Bladder, carcinoma .d 9 to 1222 1 to 1214 E45K tiling clone, available from MGC, AAA   1214/1214
(100 %)
2 diff
(99.9 %id)
DA612403   .d 11 to 538 2 to 530 P107L capped   529/529
(100 %)
4 diff
(99.3 %id)
BG612589 embryonal carcinoma, testis .d 19 to 519 33 to 534 exact     502/534
(94 %)
7 diff
(98.7 %id)
BE567328 bladder, carcinoma, cell line .d 29 to 523 1 to 494 E45K I78M A79L V80S S81L ...     494/499
(98 %)
5 diff
(99.0 %id)
BF027839 bladder, carcinoma, cell line .d 29 to 469 1 to 444 I18X A23G K24* available from MGC,   444/444
(100 %)
6 diff
(98.7 %id)
BG614892 embryonal carcinoma, testis .d 29 to 550 1 to 524 M103N V104G A105S K106Q P107D ...     524/524
(100 %)
11 diff
(98.0 %id)
BE566483 bladder, carcinoma, cell line .d 31 to 529 1 to 498 P13R L14Y P15L A16Q G17V ...     498/498
(100 %)
9 diff
(98.2 %id)
AK097702 testis .e 1 to 2277 8 to 2285 P22A tiling clone, available from FLJ,   2285/2285
(100 %)
12 diff
(99.5 %id)
DB047089 testis .e 1 to 543 8 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DB094402 testis .e 1 to 555 7 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DB338281 testis .e 2081 to 2277 203 to 1       203/203
(100 %)
6 diff
(97.1 %id)
BU183131 bone marrow, from acute myelogenous leukemia .f 1 to 798 1 to 799 exact tiling clone,   799/799
(100 %)
20 diff
(97.5 %id)
BC007078 Bone marrow, acute myelogenous leukemia .f 4 to 1476 1 to 1473   available from MGC, AAA   1473/1473
(100 %)
1 diff
(100.0 %id)
BC019234 Bone marrow, acute myelogenous leukemia .f 4 to 1476 5 to 1477   tiling clone, available from MGC, AAA   1473/1473
(100 %)
1 diff
(100.0 %id)
BE748280 bone marrow, from acute myelogenous leukemia .f 24 to 586 1 to 563   available from MGC,   563/563
(100 %)
3 diff
(99.5 %id)
TI_1948230901   .f 296 to 1391 122 to 1217   AAA   1096/1267
(86 %)
62 diff
(95.2 %id)
TI_1948231396   .f 296 to 1359 121 to 1207       1087/1285
(84 %)
64 diff
(95.1 %id)
CV028771 mixed .f 300 to 448 1 to 149       149/160
(93 %)
1 diff
(99.4 %id)
TI_1948231152   .f 300 to 1418 128 to 1260       1133/1277
(88 %)
62 diff
(95.2 %id)
BQ575139 Chondrosarcoma Grade II, Left Pelvis .f 538 to 1261 742 to 19   AAA   724/724
(100 %)
3 diff
(99.6 %id)
BE748871 bone marrow, from acute myelogenous leukemia .f 659 to 1402 746 to 1   available from MGC,   746/749
(99 %)
7 diff
(99.1 %id)
AW172914 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .f 1012 to 1477 474 to 9       466/474
(98 %)
0 diff
(100 %id)
N22182 cochlea, ear .f 1200 to 1477 278 to 1       278/284
(97 %)
0 diff
(100 %id)
N81189 cochlea, ear .f 1208 to 1476 1 to 269   fully sequenced, AAA   269/269
(100 %)
0 diff
(100 %id)
N22289 cochlea, ear .f 1333 to 1477 145 to 1   fully sequenced,   145/145
(100 %)
0 diff
(100 %id)
DB034489 testis .g 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
BM465909 eye, retinoblastoma .g 490 to 1185 1 to 696 K170Q K198Q tiling clone,   801/1035
(77 %)
25 diff
(97.6 %id)
AL705049 human skeletal muscle .h 1 to 612 1 to 612 exact tiling clone,   612/612
(100 %)
0 diff
(100 %id)
BX507041 Liver .i 1 to 592 1 to 593 exact tiling clone,   593/593
(100 %)
4 diff
(99.4 %id)
DB224039 trachea .j 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
3 diff
(99.5 %id)
DB236600 trachea .j 34 to 579 2 to 547 G31R H32P F33L L34S E35G ... tiling clone, capped   546/546
(100 %)
5 diff
(99.1 %id)
N54733 multiple sclerosis lesions .k-u 1 to 362 1 to 363   tiling clone,   363/365
(99 %)
6 diff
(98.4 %id)
BX090594 pooled .k-u 79 to 539 1 to 453 P49L S50P P51L F55S P56S ... tiling clone,   453/453
(100 %)
13 diff
(97.2 %id)
BF223897 pooled germ cell tumors .l-u 1 to 388 392 to 5 exact tiling clone,   388/392
(98 %)
0 diff
(100 %id)
BF838045 head_neck .m-u 1 to 201 8 to 208 I3F L4X tiling clone,   201/208
(96 %)
6 diff
(97.2 %id)
AL523314 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized Gene ZNF273, variant not shown         Suspected internal deletion, this clone was ignored    
AL562189 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized Gene ZNF273, variant not shown         Suspected internal deletion, this clone was ignored    
AA922121 pooled Gene ZNF273, variant not shown         Suspected internal deletion, this clone was ignored    
BC108740 Uterus, leiomyosarcoma Gene ZNF273, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BU509612 leiomyosarcoma, uterus Gene ZNF273, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948231395   Gene ZNF273, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C