To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene ZNF253andZNF93TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
222 supporting clones for gene ZNF253andZNF93 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX089026 bone marrow, CD34+, CD38- from normal bone marrow donor .a 1 to 353 369 to 16     Submitted on the opposite strand 354/390
(90 %)
0 diff
(100 %id)
AI612150 bone marrow, CD34+, CD38- from normal bone marrow donor .a 1 to 353 362 to 9   tiling clone,   354/395
(89 %)
0 diff
(100 %id)
DA785894 brain .a 298 to 874 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
NM_031218.3   .a 318 to 3111 1 to 2794 exact RefSeq,   2794/2794
(100 %)
0 diff
(100 %id)
DA774089 brain .a 319 to 889 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB445718 testis .a 332 to 1017 1 to 685       685/685
(100 %)
7 diff
(99.0 %id)
DN996316 breast cancer, Mammary gland (cancer tissue) .a 336 to 978 1 to 644   tiling clone,   644/644
(100 %)
6 diff
(99.1 %id)
DB505818 hypothalamus .a 342 to 1026 1 to 685       685/685
(100 %)
3 diff
(99.6 %id)
DA508882 brain .a 346 to 930 2 to 586   capped   585/585
(100 %)
5 diff
(99.2 %id)
BM761875 lymph node, stomach .a 346 to 813 1 to 468       468/468
(100 %)
2 diff
(99.6 %id)
BM842045 lymph node, stomach .a 346 to 853 1 to 508   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 508/525
(96 %)
2 diff
(99.7 %id)
BM844223 lymph node, stomach .a 346 to 843 1 to 497       497/497
(100 %)
4 diff
(99.2 %id)
BC107581 Lung, mucoepidermoid carcinoma .a 347 to 850 1 to 504   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 504/535
(94 %)
4 diff
(99.3 %id)
DB153588 thymus .a 347 to 933 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
BG496417 lung, mucoepidermoid carcinoma .a 350 to 850 1 to 504   available from MGC,   504/518
(97 %)
5 diff
(99.1 %id)
BG495874 lung, mucoepidermoid carcinoma .a 350 to 847 1 to 497       497/867
(57 %)
7 diff
(99.2 %id)
BC070372 Lung, mucoepidermoid carcinoma .a 351 to 850 1 to 500   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 500/532
(93 %)
0 diff
(100 %id)
DA434651 tongue, tumor tissue .a 352 to 819 2 to 469   capped   468/468
(100 %)
0 diff
(100 %id)
DA738251   .a 352 to 1176 2 to 826   capped   825/827
(99 %)
9 diff
(99.0 %id)
DA789177 brain .a 352 to 936 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA793120 brain .a 352 to 853 2 to 505   capped   504/504
(100 %)
3 diff
(99.5 %id)
DA795385 brain .a 352 to 898 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA941470 Spleen .a 352 to 953 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DN997896 breast cancer, Mammary gland (cancer tissue) .a 352 to 900 1 to 549       549/549
(100 %)
4 diff
(99.3 %id)
DB261349 uterus .a 352 to 919 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA732268   .a 354 to 972 2 to 628   capped   627/643
(97 %)
11 diff
(98.3 %id)
DA790815 brain .a 354 to 903 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB109021 thymus .a 354 to 934 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA735354   .a 356 to 1094 2 to 739   capped   738/745
(99 %)
3 diff
(99.6 %id)
DA524668 brain .a 357 to 920 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA553539   .a 359 to 914 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB112838 thymus .a 359 to 937 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA275236 corpus callosum .a 362 to 913 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA741500   .a 362 to 933 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
CN419730 embryonic stem cells, cell lines H1, H7, andH9 .a 363 to 940 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
AA587676 adrenal adenoma, adrenal gland .a 370 to 714 1 to 346     Submitted on the opposite strand 346/350
(98 %)
5 diff
(98.6 %id)
DN999557   .a 376 to 1058 8 to 690       683/690
(98 %)
11 diff
(98.5 %id)
BX281668 embryonal carcinoma, cell line, testis .a 389 to 865 1 to 477       477/477
(100 %)
0 diff
(100 %id)
DA478093   .a 389 to 935 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DB234383 trachea .a 389 to 853 2 to 466   capped   465/465
(100 %)
1 diff
(99.8 %id)
DA757825   .a 390 to 926 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA737145   .a 392 to 1220 2 to 831   capped   830/830
(100 %)
6 diff
(99.3 %id)
DA796482 brain .a 392 to 853 2 to 463   capped   462/462
(100 %)
1 diff
(99.8 %id)
BG257405 embryonal carcinoma, cell line, testis .a 393 to 1059 6 to 667       662/679
(97 %)
18 diff
(97.4 %id)
BC038096 Uterus, leiomyosarcoma .a 394 to 853 12 to 471   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 460/529
(86 %)
1 diff
(99.9 %id)
BM458007 leiomyosarcoma, uterus .a 394 to 853 1 to 460   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 460/1064
(43 %)
1 diff
(100.0 %id)
DA631658 Kidney .a 397 to 926 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA721697   .a 401 to 632 2 to 233   capped   232/232
(100 %)
2 diff
(99.2 %id)
DA736118   .a 413 to 1328 2 to 913   capped   912/912
(100 %)
12 diff
(98.7 %id)
CN419729 embryonic stem cells, DMSO-treated H9 cellline .a 420 to 750 1 to 331       331/331
(100 %)
0 diff
(100 %id)
TI_2016724385   .a 463 to 1586 58 to 1180     Submitted on the opposite strand 1123/1260
(89 %)
25 diff
(98.1 %id)
TI_2016724925   .a 463 to 1625 1168 to 8       1159/1288
(89 %)
15 diff
(98.9 %id)
TI_2016729085   .a 463 to 1574 62 to 1161     Submitted on the opposite strand 1100/1296
(84 %)
25 diff
(98.1 %id)
TI_1971558075   .a 463 to 1054 47 to 638       592/638
(92 %)
10 diff
(98.5 %id)
BC136718 Brain, cerebellum, PCR rescued clones .a 466 to 2455 1 to 1990 exact tiling clone,   1990/1990
(100 %)
0 diff
(100 %id)
BC136719 Testicle, PCR rescued clones .a 466 to 2455 1 to 1990 exact     1990/1990
(100 %)
0 diff
(100 %id)
BM761850 lymph node, stomach .a 521 to 797 1 to 277       277/277
(100 %)
2 diff
(99.3 %id)
BG289439 bladder, transitional cell papilloma, cell line .a 774 to 1447 1 to 676       676/990
(68 %)
4 diff
(99.6 %id)
DA732282   .a 779 to 1514 2 to 738   capped   737/737
(100 %)
9 diff
(98.8 %id)
AU149698   .a 2561 to 3083 519 to 1   tiling clone,   519/519
(100 %)
10 diff
(98.1 %id)
DB370848   .a 2564 to 3111 550 to 1   tiling clone,   550/553
(99 %)
7 diff
(98.8 %id)
AU153236   .a 2578 to 3111 535 to 1       535/535
(100 %)
10 diff
(98.2 %id)
DB324730   .a 2579 to 3111 533 to 1   tiling clone,   533/533
(100 %)
1 diff
(99.9 %id)
AU154192   .a 2590 to 3111 527 to 1       527/532
(99 %)
11 diff
(98.0 %id)
AU152357   .a 2604 to 3111 506 to 1   tiling clone,   506/549
(92 %)
6 diff
(99.0 %id)
AU149679   .a 2658 to 3083 424 to 1       424/426
(99 %)
5 diff
(98.9 %id)
DB148623 thymus .b -9 to 459 2 to 471   tiling clone, capped   470/470
(100 %)
1 diff
(99.8 %id)
CD637294   .b 161 to 332 173 to 1       173/173
(100 %)
4 diff
(97.7 %id)
CD637295   .b 161 to 333 1 to 174       174/174
(100 %)
4 diff
(97.8 %id)
CD637296   .b 161 to 332 172 to 1       172/172
(100 %)
3 diff
(98.3 %id)
CD637297   .b 161 to 333 1 to 173       173/173
(100 %)
3 diff
(98.3 %id)
DA572502 whole embryo, mainly body .b 359 to 1172 2 to 813   tiling clone, capped   812/840
(96 %)
13 diff
(98.5 %id)
DB125440 thymus .b 619 to 1190 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
AK295921 substantia nigra .b 649 to 2746 1 to 2098   tiling clone,   2098/2098
(100 %)
2 diff
(100.0 %id)
DC336684 substantia nigra .b 649 to 1217 1 to 569       569/569
(100 %)
0 diff
(100 %id)
TI_1971555339   .b 812 to 1921 1112 to 1       1112/1255
(88 %)
129 diff
(89.8 %id)
CN419731 embryonic stem cells, cell lines H1, H7, andH9 .b 864 to 1261 1 to 398       398/398
(100 %)
1 diff
(99.8 %id)
TI_2016730523   .b 937 to 2118 1240 to 57     Submitted on the opposite strand 1184/1298
(91 %)
0 diff
(100 %id)
TI_2016729077   .b 986 to 2118 1180 to 59     Submitted on the opposite strand 1122/1237
(90 %)
0 diff
(100 %id)
TI_2016730231   .b 987 to 2118 1169 to 55     Submitted on the opposite strand 1115/1279
(87 %)
0 diff
(100 %id)
BP254659 Kidney .b 1002 to 1583 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BC039001 Testis, embryonal carcinoma .b 1005 to 1719 1 to 715   available from MGC, AAA   715/741
(96 %)
1 diff
(99.9 %id)
BG390090 embryonal carcinoma, cell line, testis .b 1019 to 1614 1 to 596   available from MGC,   596/596
(100 %)
0 diff
(100 %id)
BP306873   .b 1149 to 1728 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BU165449 eye, retinoblastoma .b 1676 to 2498 1 to 823       823/823
(100 %)
2 diff
(99.8 %id)
AA005106 liver and spleen .b 1811 to 2079 1 to 266       266/266
(100 %)
5 diff
(98.2 %id)
CN419727 embryonic stem cells, DMSO-treated H9 cellline .b 1834 to 2021 1 to 188       188/188
(100 %)
0 diff
(100 %id)
DB510743 testis .b 2100 to 2774 1 to 675     Submitted on the opposite strand 675/675
(100 %)
1 diff
(99.9 %id)
AW136598   .b 2164 to 2554 423 to 33   AAA   391/406
(96 %)
0 diff
(100 %id)
AI653614 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2255 to 2774 519 to 1   tiling clone,   519/519
(100 %)
1 diff
(99.9 %id)
DB577111 hypothalamus .b 2288 to 2774 1 to 488     Submitted on the opposite strand 488/488
(100 %)
5 diff
(99.0 %id)
CB051026 Prostate .b 2314 to 2770 483 to 27   AAA   457/506
(90 %)
0 diff
(100 %id)
BX116100 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2334 to 2782 455 to 7       449/455
(98 %)
0 diff
(100 %id)
DB514493 testis .b 2342 to 2774 1 to 434     Submitted on the opposite strand 434/434
(100 %)
5 diff
(98.9 %id)
AI343868 2 pooled tumors (clear cell type), Kidney .b 2357 to 2777 424 to 6       419/424
(98 %)
0 diff
(100 %id)
AW439140 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2382 to 2776 398 to 1       398/398
(100 %)
3 diff
(99.3 %id)
AU150137   .b 2401 to 2774 374 to 1       374/374
(100 %)
2 diff
(99.5 %id)
AI041559   .b 2411 to 2893 485 to 3   tiling clone,   483/485
(99 %)
0 diff
(100 %id)
AI247815 liver and spleen .b 2430 to 2774 343 to 1       343/343
(100 %)
4 diff
(98.9 %id)
BF438809 pooled .b 2471 to 2779 309 to 1       309/309
(100 %)
4 diff
(98.8 %id)
AI287583 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2494 to 2779 284 to 1       284/284
(100 %)
4 diff
(98.6 %id)
W86185 liver and spleen .b 2528 to 2774 250 to 1       250/256
(97 %)
5 diff
(98.1 %id)
DB359537 whole embryo, mainly body .b 2676 to 3232 565 to 1       565/566
(99 %)
24 diff
(95.8 %id)
BM015522 breast, mammary adenocarcinoma, cell line .b 2796 to 3232 1 to 437   AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 437/437
(100 %)
0 diff
(100 %id)
TI_59393768   .b 2796 to 3249 88 to 540   tiling clone,   453/666
(68 %)
2 diff
(99.7 %id)
BJ991120 hepatoblastoma .c 1 to 578 6 to 583   tiling clone,   583/583
(100 %)
2 diff
(99.7 %id)
BJ991121 hepatoblastoma .c 2322 to 2861 540 to 1   tiling clone,   540/540
(100 %)
1 diff
(99.9 %id)
DA507922 brain .d 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
DA749175   .d 13 to 581 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DN997734 breast cancer, Mammary gland (cancer tissue) .d 23 to 572 8 to 558       551/558
(98 %)
6 diff
(99.0 %id)
DN991401 brain, whole brain .d 23 to 696 7 to 680       674/681
(98 %)
10 diff
(98.6 %id)
BG142261 Islets of Langerhans, Pancreas .d 24 to 732 1 to 709       709/709
(100 %)
4 diff
(99.5 %id)
BX500657 Liver .d 40 to 695 1 to 656       656/656
(100 %)
8 diff
(98.8 %id)
DB229582 trachea .d 41 to 630 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA918430 small intestine .d 42 to 599 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA324277 hippocampus .d 43 to 593 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA772559 brain .d 43 to 618 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA805721 brain .d 43 to 587 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DA929325 small intestine .d 43 to 602 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA948947 Spleen .d 43 to 598 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA101728 cerebellum .d 47 to 583 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA108695 cerebellum .d 47 to 640 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
DA110847 cerebellum .d 47 to 631 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA776442 brain .d 47 to 616 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB176349 kidney, tumor tissue .d 47 to 601 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA709777   .d 51 to 605 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA071291 cerebellum .d 53 to 600 2 to 549   capped   548/550
(99 %)
1 diff
(99.9 %id)
DA737849   .d 53 to 926 2 to 874   capped   873/875
(99 %)
8 diff
(99.1 %id)
BC014148 Eye, retinoblastoma .d 65 to 2392 1 to 2328 exact tiling clone, available from MGC, AAA   2328/2328
(100 %)
0 diff
(100 %id)
NM_021047.2   .d 65 to 2392 1 to 2328 exact RefSeq, AAA   2328/2328
(100 %)
0 diff
(100 %id)
BP313095 mammary gland .d 71 to 383 1 to 313       313/583
(53 %)
2 diff
(99.7 %id)
DA789527 brain .d 72 to 650 2 to 582   capped   581/581
(100 %)
5 diff
(99.2 %id)
DA593021 lung .d 74 to 643 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA798782 brain .d 74 to 611 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DB177880 kidney, tumor tissue .d 74 to 627 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
CF552484 Pooled muscle (cardiac and skeletal) .d 75 to 929 22 to 887       866/892
(97 %)
30 diff
(96.7 %id)
DA731541   .d 75 to 825 2 to 755   capped   754/761
(99 %)
13 diff
(98.3 %id)
DA751972   .d 75 to 650 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA705763   .d 78 to 575 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
BE252748 eye, retinoblastoma .d 82 to 743 1 to 666   available from MGC,   666/671
(99 %)
20 diff
(97.1 %id)
BC125063 PCR rescued clones .d 86 to 2028 1 to 1943 exact     1943/1944
(99 %)
1 diff
(100.0 %id)
CN295470 embryonic stem cells, cell lines H1, H7, andH9 .d 131 to 806 1 to 677       677/677
(100 %)
3 diff
(99.6 %id)
DA273795 corpus callosum .d 159 to 725 8 to 575   capped   568/574
(98 %)
7 diff
(98.8 %id)
CN295469 embryonic stem cells, cell lines H1, H7, andH9 .d 194 to 806 1 to 614       614/614
(100 %)
5 diff
(99.2 %id)
TI_1948216191   .d 378 to 1226 122 to 979   fully sequenced,   858/979
(87 %)
14 diff
(98.6 %id)
TI_1948216346   .d 378 to 1154 124 to 912   fully sequenced,   789/912
(86 %)
6 diff
(99.4 %id)
TI_1948216663   .d 378 to 1205 121 to 952   fully sequenced,   832/952
(87 %)
21 diff
(97.8 %id)
TI_1948216508   .d 379 to 1153 121 to 902       782/1341
(58 %)
27 diff
(98.0 %id)
EL735108 mixed .d 385 to 986 1 to 602       602/602
(100 %)
1 diff
(99.9 %id)
AK074872   .d 415 to 2645 1 to 2231   tiling clone, available from FLJ,   2231/2231
(100 %)
2 diff
(100.0 %id)
DA734592   .d 416 to 1140 2 to 726   capped   725/727
(99 %)
3 diff
(99.6 %id)
CR993539 T-Lymphocytes .d 793 to 1649 1 to 858       858/858
(100 %)
7 diff
(99.2 %id)
DB043290 testis .d 818 to 1388 2 to 573   capped   572/573
(99 %)
2 diff
(99.7 %id)
TI_1948216347   .d 1124 to 1661 662 to 116   fully sequenced,   547/662
(82 %)
5 diff
(99.3 %id)
TI_1948216664   .d 1175 to 1661 608 to 120   fully sequenced,   489/608
(80 %)
5 diff
(99.2 %id)
TI_1948216192   .d 1196 to 1661 584 to 115   fully sequenced,   470/584
(80 %)
5 diff
(99.2 %id)
DB370470   .d 1998 to 2556 560 to 1       560/562
(99 %)
3 diff
(99.5 %id)
DB366706   .d 2065 to 2645 577 to 1       577/577
(100 %)
13 diff
(97.8 %id)
AA897778 metastatic prostate bone lesion .d 2489 to 2623 138 to 4       135/143
(94 %)
0 diff
(100 %id)
DA167341 amygdala .e 1 to 483 2 to 484   tiling clone, capped   483/483
(100 %)
1 diff
(99.8 %id)
DA601230   .e 3 to 241 2 to 240   capped   239/239
(100 %)
0 diff
(100 %id)
DA514638 brain .e 28 to 571 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB139261 thymus .e 45 to 497 2 to 454   capped   453/453
(100 %)
0 diff
(100 %id)
DA943216 Spleen .e 52 to 607 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA526384 brain .e 54 to 618 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA531266 brain .e 54 to 662 2 to 610   capped   609/609
(100 %)
2 diff
(99.7 %id)
DA310221 hippocampus .e 64 to 617 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BU186714 embryonal carcinoma, cell line, testis .e 73 to 991 1 to 927   available from MGC,   927/927
(100 %)
17 diff
(98.2 %id)
BC065572 Eye, retinoblastoma .e 78 to 2337 1 to 2260 exact tiling clone, available from MGC, AAA   2260/2260
(100 %)
0 diff
(100 %id)
DA169451 amygdala .e 79 to 638 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BP230993 brain .e 84 to 668 1 to 585       585/585
(100 %)
0 diff
(100 %id)
BU173345 eye, retinoblastoma .e 84 to 992 1 to 911       911/912
(99 %)
7 diff
(99.3 %id)
DA209569 brain .e 85 to 654 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA303364 hippocampus .e 85 to 671 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
BC125064 PCR rescued clones .e 97 to 1816 1 to 1720 exact     1720/1721
(99 %)
1 diff
(100.0 %id)
BE766205 nervous_tumor .e 234 to 449 1 to 216       216/218
(99 %)
5 diff
(97.8 %id)
DA429685 colon .e 686 to 1243 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
AW887417 ovary .e 741 to 1018 278 to 1       278/278
(100 %)
15 diff
(94.7 %id)
BX090541   .e 987 to 1706 1 to 724       724/724
(100 %)
3 diff
(99.6 %id)
BU192157 embryonal carcinoma, cell line, testis .e 1179 to 2080 1 to 902       902/904
(99 %)
19 diff
(97.9 %id)
AW999427 breast_normal .e 1337 to 1639 308 to 7     Submitted on the opposite strand 302/308
(98 %)
0 diff
(100 %id)
BQ215037 embryonal carcinoma, cell line, testis .e 1474 to 2211 33 to 780       748/994
(75 %)
28 diff
(97.2 %id)
N41945.
matches multiple genes
melanocyte .e 1534 to 1786 1 to 253     also hits gene SNX19 253/253
(100 %)
1 diff
(99.7 %id)
AA090458   .e 1600 to 1689 1 to 87       87/87
(100 %)
3 diff
(96.6 %id)
BC022891 Testis, embryonal carcinoma .e 1766 to 3362 1 to 1597   tiling clone, available from MGC, AAA   1597/1597
(100 %)
3 diff
(99.9 %id)
BG504312 embryonal carcinoma, testis .e 1769 to 2488 1 to 722   available from MGC,   722/726
(99 %)
5 diff
(99.4 %id)
DB319961   .e 1822 to 2344 524 to 1       524/524
(100 %)
3 diff
(99.5 %id)
AI694256 colon .e 1943 to 2164 222 to 1       222/222
(100 %)
2 diff
(99.1 %id)
BF438321 Prostate .e 1983 to 2409 427 to 1       427/427
(100 %)
0 diff
(100 %id)
BF874442 lung_tumor .e 2030 to 2255 34 to 257       224/267
(83 %)
3 diff
(98.9 %id)
BX451492 brain, fetal brain .e 2030 to 2959 1 to 928   tiling clone,   928/932
(99 %)
14 diff
(98.5 %id)
AI867517 Prostate .e 2044 to 2409 366 to 1       366/366
(100 %)
0 diff
(100 %id)
AW469280 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2628 to 3153 526 to 1       526/526
(100 %)
0 diff
(100 %id)
AW469272 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2664 to 3153 490 to 1       490/490
(100 %)
0 diff
(100 %id)
BQ022496 placenta .e 2762 to 2986 242 to 18   AAA   225/225
(100 %)
1 diff
(99.6 %id)
BP417647 small intestine .e 3000 to 3356 1 to 358     Submitted on the opposite strand 358/358
(100 %)
3 diff
(99.2 %id)
BU940607 mixed (pool of 40 RNAs) .f -9 to 783 1 to 795   tiling clone,   795/795
(100 %)
15 diff
(98.2 %id)
DA341151 substantia nigra .f 1 to 548 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BU567590 testis .f 3 to 808 1 to 822 V88S F89L H90S K91* tiling clone,   822/835
(98 %)
46 diff
(94.5 %id)
CN295468 embryonic stem cells, DMSO-treated H9 cellline .f 13 to 563 1 to 551       551/551
(100 %)
4 diff
(99.3 %id)
CN295467 embryonic stem cells, DMSO-treated H9 cellline .f 16 to 664 1 to 652   tiling clone,   652/656
(99 %)
7 diff
(99.0 %id)
BG777184 lung, mucoepidermoid carcinoma .g 1 to 688 7 to 694 K111R available from MGC,   694/694
(100 %)
12 diff
(98.3 %id)
BC020837 Lung, mucoepidermoid carcinoma .g 1 to 1292 6 to 1297 K111R tiling clone, available from MGC, AAA   1297/1297
(100 %)
3 diff
(99.8 %id)
BC058821 Bone marrow, chronic myelogenous leukemia .g 21 to 1353 1 to 1333 exact tiling clone, available from MGC, AAA   1333/1333
(100 %)
4 diff
(99.7 %id)
BF185241 bone marrow, from chronic myelogenous leukemia .g 24 to 723 1 to 689 C20A L21W D22T T23L A24H ... available from MGC,   689/846
(81 %)
21 diff
(97.6 %id)
CN419728 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .g 36 to 727 1 to 692 exact tiling clone,   692/692
(100 %)
0 diff
(100 %id)
BX096570 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g 538 to 1039 1 to 502       502/502
(100 %)
0 diff
(100 %id)
AW946315 lung_tumor .g 575 to 813 238 to 1     Submitted on the opposite strand 238/240
(99 %)
4 diff
(98.4 %id)
AW946349 lung_tumor .g 575 to 816 265 to 26     Submitted on the opposite strand 240/267
(89 %)
0 diff
(100 %id)
AI287601 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g 874 to 1291 417 to 1       417/417
(100 %)
3 diff
(99.3 %id)
DA026123   .h 1 to 565 6 to 571 D29Y P108T K110Q C111M I112H ... tiling clone, capped   570/570
(100 %)
3 diff
(99.5 %id)
AL710992 human skeletal muscle .i 1 to 590 1 to 591 L83I tiling clone,   591/591
(100 %)
3 diff
(99.5 %id)
CX783315 human embryonic stem cells .i 557 to 1392 1 to 836   tiling clone,   836/836
(100 %)
0 diff
(100 %id)
R47247   .i 876 to 1114 239 to 1       239/240
(99 %)
0 diff
(100 %id)
CX783253 human embryonic stem cells .i 1584 to 2145 591 to 30   tiling clone, AAA   562/562
(100 %)
2 diff
(99.7 %id)
BI768624 pooled lung and spleen .i 1598 to 2389 1 to 781   tiling clone,   781/786
(99 %)
30 diff
(96.2 %id)
TI_57180891   .i 1599 to 2389 65 to 844       780/849
(91 %)
30 diff
(96.5 %id)
BE093638 breast .i 2330 to 2616 284 to 1   tiling clone, Submitted on the opposite strand 284/284
(100 %)
3 diff
(99.0 %id)
BE093709 breast .i 2353 to 2620 1 to 268   tiling clone,   268/271
(98 %)
4 diff
(98.6 %id)
BG542138 lung .j 1 to 768 1 to 770 L44W G45E D46I P47H Q48S ... tiling clone,   770/871
(88 %)
17 diff
(98.1 %id)
BE972575 testis .k 1 to 549 1 to 552 L31W G32E E33S P34H Q35S ... tiling clone,   552/552
(100 %)
14 diff
(97.5 %id)
CN295471 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 59 to 355 13 to 309   tiling clone,   297/309
(96 %)
7 diff
(97.8 %id)
CN413720 embryonic stem cells, cell lines H1, H7, andH9 .l-u 1 to 674 1 to 674 exact tiling clone,   674/674
(100 %)
0 diff
(100 %id)
BX494163 Liver .l-u 92 to 610 1 to 521       521/521
(100 %)
3 diff
(99.5 %id)
DB079621 testis .m 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
AF038951 bone marrow Gene ZNF253andZNF93, variant not shown         Suspected internal deletion, this clone was ignored    
AK022550   Gene ZNF253andZNF93, variant not shown       available from FLJ, This clone was ignored    
AK074757   Gene ZNF253andZNF93, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AK096342   Gene ZNF253andZNF93, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
TI_1971556323   Gene ZNF253andZNF93, variant not shown         This clone was ignored    
DB312452 thalamus Gene ZNF253andZNF93, variant not shown         This clone was ignored    
DA407997 thalamus Gene ZNF253andZNF93, variant not shown       capped This clone was ignored    
BX107128 melanocyte Gene ZNF253andZNF93, variant not shown         This clone was ignored    
CR590630 fetal brain Gene ZNF253andZNF93, variant not shown         Suspected internal deletion, this clone was ignored    
BX419616 brain, fetal brain Gene ZNF253andZNF93, variant not shown         Suspected internal deletion, this clone was ignored    
BM800562 leiomyosarcoma, uterus Gene ZNF253andZNF93, variant not shown         Suspected internal deletion, this clone was ignored    
BM994096.
matches multiple genes
lung, Metastatic Chondrosarcoma Gene ZNF253andZNF93, variant not shown       AAA Suspected internal deletion, this clone was ignored, also hits gene wahama    
BM994096.
matches multiple genes
lung, Metastatic Chondrosarcoma Gene wahama, variant not shown       AAA Suspected internal deletion, this clone was ignored, also hits gene wahama    
BC053607 Testis, embryonal carcinoma Gene ZNF253andZNF93, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
AU123664   Gene ZNF253andZNF93, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC