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Gene ZNF253andZNF93TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
222 supporting clones for gene ZNF253andZNF93 back to top
cDNA accession
Links to the sequence		 Tissue

most 5' clones
in red		 Match
mRNA		 From bp
to bp
in mRNA		 From bp
to bp
in accs.		 Clone encodes
complete protein
(with AA variation)		 Features Anomalies
detected by
AceView		 Accession
match over
(% length)		 Base differences
relative to genome
(% identity)
AA090458   .e 1600 to 1689 1 to 87       87/87
(100 %)		 3 diff
(96.6 %id)
AK074872   .d 415 to 2645 1 to 2231   tiling clone, available from FLJ,   2231/2231
(100 %)		 2 diff
(100.0 %id)
AK295921 substantia nigra .b 649 to 2746 1 to 2098   tiling clone,   2098/2098
(100 %)		 2 diff
(100.0 %id)
DA026123   .h 1 to 565 6 to 571 D29Y P108T K110Q C111M I112H ... tiling clone, capped   570/570
(100 %)		 3 diff
(99.5 %id)
AW887417 ovary .e 741 to 1018 278 to 1       278/278
(100 %)		 15 diff
(94.7 %id)
AW946315 lung_tumor .g 575 to 813 238 to 1     Submitted on the opposite strand 238/240
(99 %)		 4 diff
(98.4 %id)
AW946349 lung_tumor .g 575 to 816 265 to 26     Submitted on the opposite strand 240/267
(89 %)		 0 diff
(100 %id)
AW999427 breast_normal .e 1337 to 1639 308 to 7     Submitted on the opposite strand 302/308
(98 %)		 0 diff
(100 %id)
BC065572 Eye, retinoblastoma .e 78 to 2337 1 to 2260 exact tiling clone, available from MGC, AAA   2260/2260
(100 %)		 0 diff
(100 %id)
BC125063 PCR rescued clones .d 86 to 2028 1 to 1943 exact     1943/1944
(99 %)		 1 diff
(100.0 %id)
BC125064 PCR rescued clones .e 97 to 1816 1 to 1720 exact     1720/1721
(99 %)		 1 diff
(100.0 %id)
BC136718 Brain, cerebellum, PCR rescued clones .a 466 to 2455 1 to 1990 exact tiling clone,   1990/1990
(100 %)		 0 diff
(100 %id)
BC136719 Testicle, PCR rescued clones .a 466 to 2455 1 to 1990 exact     1990/1990
(100 %)		 0 diff
(100 %id)
TI_2016724385   .a 463 to 1586 58 to 1180     Submitted on the opposite strand 1123/1260
(89 %)		 25 diff
(98.1 %id)
TI_2016724925   .a 463 to 1625 1168 to 8       1159/1288
(89 %)		 15 diff
(98.9 %id)
TI_2016729077   .b 986 to 2118 1180 to 59     Submitted on the opposite strand 1122/1237
(90 %)		 0 diff
(100 %id)
TI_2016729085   .a 463 to 1574 62 to 1161     Submitted on the opposite strand 1100/1296
(84 %)		 25 diff
(98.1 %id)
TI_2016730231   .b 987 to 2118 1169 to 55     Submitted on the opposite strand 1115/1279
(87 %)		 0 diff
(100 %id)
TI_2016730523   .b 937 to 2118 1240 to 57     Submitted on the opposite strand 1184/1298
(91 %)		 0 diff
(100 %id)
TI_1971555339   .b 812 to 1921 1112 to 1       1112/1255
(88 %)		 129 diff
(89.8 %id)
TI_1971558075   .a 463 to 1054 47 to 638       592/638
(92 %)		 10 diff
(98.5 %id)
BE093638 breast .i 2330 to 2616 284 to 1   tiling clone, Submitted on the opposite strand 284/284
(100 %)		 3 diff
(99.0 %id)
BE093709 breast .i 2353 to 2620 1 to 268   tiling clone,   268/271
(98 %)		 4 diff
(98.6 %id)
BE766205 nervous_tumor .e 234 to 449 1 to 216       216/218
(99 %)		 5 diff
(97.8 %id)
BF874442 lung_tumor .e 2030 to 2255 34 to 257       224/267
(83 %)		 3 diff
(98.9 %id)
DA071291 cerebellum .d 53 to 600 2 to 549   capped   548/550
(99 %)		 1 diff
(99.9 %id)
DA101728 cerebellum .d 47 to 583 2 to 538   capped   537/537
(100 %)		 0 diff
(100 %id)
DA108695 cerebellum .d 47 to 640 2 to 594   capped   593/593
(100 %)		 1 diff
(99.9 %id)
DA110847 cerebellum .d 47 to 631 2 to 586   capped   585/585
(100 %)		 0 diff
(100 %id)
DA167341 amygdala .e 1 to 483 2 to 484   tiling clone, capped   483/483
(100 %)		 1 diff
(99.8 %id)
DA169451 amygdala .e 79 to 638 2 to 562   capped   561/561
(100 %)		 1 diff
(99.9 %id)
DA209569 brain .e 85 to 654 2 to 572   capped   571/571
(100 %)		 1 diff
(99.9 %id)
DA273795 corpus callosum .d 159 to 725 8 to 575   capped   568/574
(98 %)		 7 diff
(98.8 %id)
DA275236 corpus callosum .a 362 to 913 2 to 552   capped   551/551
(100 %)		 2 diff
(99.7 %id)
DA303364 hippocampus .e 85 to 671 2 to 587   capped   586/586
(100 %)		 1 diff
(99.9 %id)
DA310221 hippocampus .e 64 to 617 2 to 555   capped   554/554
(100 %)		 0 diff
(100 %id)
DA324277 hippocampus .d 43 to 593 2 to 552   capped   551/551
(100 %)		 0 diff
(100 %id)
DA341151 substantia nigra .f 1 to 548 2 to 550   capped   549/549
(100 %)		 1 diff
(99.9 %id)
DC336684 substantia nigra .b 649 to 1217 1 to 569       569/569
(100 %)		 0 diff
(100 %id)
BX089026 bone marrow, CD34+, CD38- from normal bone marrow donor .a 1 to 353 369 to 16     Submitted on the opposite strand 354/390
(90 %)		 0 diff
(100 %id)
BX090541   .e 987 to 1706 1 to 724       724/724
(100 %)		 3 diff
(99.6 %id)
BX096570 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g 538 to 1039 1 to 502       502/502
(100 %)		 0 diff
(100 %id)
BX116100 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2334 to 2782 455 to 7       449/455
(98 %)		 0 diff
(100 %id)
BX281668 embryonal carcinoma, cell line, testis .a 389 to 865 1 to 477       477/477
(100 %)		 0 diff
(100 %id)
CD637294   .b 161 to 332 173 to 1       173/173
(100 %)		 4 diff
(97.7 %id)
CD637295   .b 161 to 333 1 to 174       174/174
(100 %)		 4 diff
(97.8 %id)
CD637296   .b 161 to 332 172 to 1       172/172
(100 %)		 3 diff
(98.3 %id)
CD637297   .b 161 to 333 1 to 173       173/173
(100 %)		 3 diff
(98.3 %id)
CN295467 embryonic stem cells, DMSO-treated H9 cellline .f 16 to 664 1 to 652   tiling clone,   652/656
(99 %)		 7 diff
(99.0 %id)
CN295468 embryonic stem cells, DMSO-treated H9 cellline .f 13 to 563 1 to 551       551/551
(100 %)		 4 diff
(99.3 %id)
CN295469 embryonic stem cells, cell lines H1, H7, andH9 .d 194 to 806 1 to 614       614/614
(100 %)		 5 diff
(99.2 %id)
CN295470 embryonic stem cells, cell lines H1, H7, andH9 .d 131 to 806 1 to 677       677/677
(100 %)		 3 diff
(99.6 %id)
CN295471 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 59 to 355 13 to 309   tiling clone,   297/309
(96 %)		 7 diff
(97.8 %id)
CN413720 embryonic stem cells, cell lines H1, H7, andH9 .l-u 1 to 674 1 to 674 exact tiling clone,   674/674
(100 %)		 0 diff
(100 %id)
CN419727 embryonic stem cells, DMSO-treated H9 cellline .b 1834 to 2021 1 to 188       188/188
(100 %)		 0 diff
(100 %id)
CN419728 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .g 36 to 727 1 to 692 exact tiling clone,   692/692
(100 %)		 0 diff
(100 %id)
CN419729 embryonic stem cells, DMSO-treated H9 cellline .a 420 to 750 1 to 331       331/331
(100 %)		 0 diff
(100 %id)
CN419730 embryonic stem cells, cell lines H1, H7, andH9 .a 363 to 940 1 to 577       577/577
(100 %)		 3 diff
(99.5 %id)
CN419731 embryonic stem cells, cell lines H1, H7, andH9 .b 864 to 1261 1 to 398       398/398
(100 %)		 1 diff
(99.8 %id)
DA429685 colon .e 686 to 1243 2 to 560   capped   559/559
(100 %)		 2 diff
(99.7 %id)
BX451492 brain, fetal brain .e 2030 to 2959 1 to 928   tiling clone,   928/932
(99 %)		 14 diff
(98.5 %id)
DA434651 tongue, tumor tissue .a 352 to 819 2 to 469   capped   468/468
(100 %)		 0 diff
(100 %id)
DA478093   .a 389 to 935 2 to 548   capped   547/547
(100 %)		 2 diff
(99.7 %id)
AL710992 human skeletal muscle .i 1 to 590 1 to 591 L83I tiling clone,   591/591
(100 %)		 3 diff
(99.5 %id)
BX494163 Liver .l-u 92 to 610 1 to 521       521/521
(100 %)		 3 diff
(99.5 %id)
BX500657 Liver .d 40 to 695 1 to 656       656/656
(100 %)		 8 diff
(98.8 %id)
EL735108 mixed .d 385 to 986 1 to 602       602/602
(100 %)		 1 diff
(99.9 %id)
BP230993 brain .e 84 to 668 1 to 585       585/585
(100 %)		 0 diff
(100 %id)
DA507922 brain .d 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)		 1 diff
(99.9 %id)
DA508882 brain .a 346 to 930 2 to 586   capped   585/585
(100 %)		 5 diff
(99.2 %id)
DA514638 brain .e 28 to 571 2 to 546   capped   545/545
(100 %)		 1 diff
(99.9 %id)
DA524668 brain .a 357 to 920 2 to 565   capped   564/564
(100 %)		 1 diff
(99.9 %id)
DA526384 brain .e 54 to 618 2 to 566   capped   565/565
(100 %)		 1 diff
(99.9 %id)
DA531266 brain .e 54 to 662 2 to 610   capped   609/609
(100 %)		 2 diff
(99.7 %id)
DB445718 testis .a 332 to 1017 1 to 685       685/685
(100 %)		 7 diff
(99.0 %id)
DB510743 testis .b 2100 to 2774 1 to 675     Submitted on the opposite strand 675/675
(100 %)		 1 diff
(99.9 %id)
DB514493 testis .b 2342 to 2774 1 to 434     Submitted on the opposite strand 434/434
(100 %)		 5 diff
(98.9 %id)
DB505818 hypothalamus .a 342 to 1026 1 to 685       685/685
(100 %)		 3 diff
(99.6 %id)
DB577111 hypothalamus .b 2288 to 2774 1 to 488     Submitted on the opposite strand 488/488
(100 %)		 5 diff
(99.0 %id)
DA553539   .a 359 to 914 2 to 557   capped   556/556
(100 %)		 0 diff
(100 %id)
DA572502 whole embryo, mainly body .b 359 to 1172 2 to 813   tiling clone, capped   812/840
(96 %)		 13 diff
(98.5 %id)
DB359537 whole embryo, mainly body .b 2676 to 3232 565 to 1       565/566
(99 %)		 24 diff
(95.8 %id)
BP417647 small intestine .e 3000 to 3356 1 to 358     Submitted on the opposite strand 358/358
(100 %)		 3 diff
(99.2 %id)
BJ991120 hepatoblastoma .c 1 to 578 6 to 583   tiling clone,   583/583
(100 %)		 2 diff
(99.7 %id)
BJ991121 hepatoblastoma .c 2322 to 2861 540 to 1   tiling clone,   540/540
(100 %)		 1 diff
(99.9 %id)
DA593021 lung .d 74 to 643 2 to 572   capped   571/571
(100 %)		 3 diff
(99.5 %id)
BP254659 Kidney .b 1002 to 1583 1 to 582       582/582
(100 %)		 0 diff
(100 %id)
DA601230   .e 3 to 241 2 to 240   capped   239/239
(100 %)		 0 diff
(100 %id)
DB319961   .e 1822 to 2344 524 to 1       524/524
(100 %)		 3 diff
(99.5 %id)
N41945.
matches multiple genes		 melanocyte .e 1534 to 1786 1 to 253     also hits gene SNX19 253/253
(100 %)		 1 diff
(99.7 %id)
W86185 liver and spleen .b 2528 to 2774 250 to 1       250/256
(97 %)		 5 diff
(98.1 %id)
AA005106 liver and spleen .b 1811 to 2079 1 to 266       266/266
(100 %)		 5 diff
(98.2 %id)
AA587676 adrenal adenoma, adrenal gland .a 370 to 714 1 to 346     Submitted on the opposite strand 346/350
(98 %)		 5 diff
(98.6 %id)
AA897778 metastatic prostate bone lesion .d 2489 to 2623 138 to 4       135/143
(94 %)		 0 diff
(100 %id)
AI041559   .b 2411 to 2893 485 to 3   tiling clone,   483/485
(99 %)		 0 diff
(100 %id)
AI247815 liver and spleen .b 2430 to 2774 343 to 1       343/343
(100 %)		 4 diff
(98.9 %id)
AI287583 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2494 to 2779 284 to 1       284/284
(100 %)		 4 diff
(98.6 %id)
AI287601 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g 874 to 1291 417 to 1       417/417
(100 %)		 3 diff
(99.3 %id)
AI343868 2 pooled tumors (clear cell type), Kidney .b 2357 to 2777 424 to 6       419/424
(98 %)		 0 diff
(100 %id)
AI612150 bone marrow, CD34+, CD38- from normal bone marrow donor .a 1 to 353 362 to 9   tiling clone,   354/395
(89 %)		 0 diff
(100 %id)
AI653614 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2255 to 2774 519 to 1   tiling clone,   519/519
(100 %)		 1 diff
(99.9 %id)
AI867517 Prostate .e 2044 to 2409 366 to 1       366/366
(100 %)		 0 diff
(100 %id)
AI694256 colon .e 1943 to 2164 222 to 1       222/222
(100 %)		 2 diff
(99.1 %id)
AW136598   .b 2164 to 2554 423 to 33   AAA   391/406
(96 %)		 0 diff
(100 %id)
AW439140 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2382 to 2776 398 to 1       398/398
(100 %)		 3 diff
(99.3 %id)
AW469280 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2628 to 3153 526 to 1       526/526
(100 %)		 0 diff
(100 %id)
AW469272 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2664 to 3153 490 to 1       490/490
(100 %)		 0 diff
(100 %id)
BF438809 pooled .b 2471 to 2779 309 to 1       309/309
(100 %)		 4 diff
(98.8 %id)
CB051026 Prostate .b 2314 to 2770 483 to 27   AAA   457/506
(90 %)		 0 diff
(100 %id)
BC014148 Eye, retinoblastoma .d 65 to 2392 1 to 2328 exact tiling clone, available from MGC, AAA   2328/2328
(100 %)		 0 diff
(100 %id)
BE252748 eye, retinoblastoma .d 82 to 743 1 to 666   available from MGC,   666/671
(99 %)		 20 diff
(97.1 %id)
BF438321 Prostate .e 1983 to 2409 427 to 1       427/427
(100 %)		 0 diff
(100 %id)
BE972575 testis .k 1 to 549 1 to 552 L31W G32E E33S P34H Q35S ... tiling clone,   552/552
(100 %)		 14 diff
(97.5 %id)
BC058821 Bone marrow, chronic myelogenous leukemia .g 21 to 1353 1 to 1333 exact tiling clone, available from MGC, AAA   1333/1333
(100 %)		 4 diff
(99.7 %id)
BF185241 bone marrow, from chronic myelogenous leukemia .g 24 to 723 1 to 689 C20A L21W D22T T23L A24H ... available from MGC,   689/846
(81 %)		 21 diff
(97.6 %id)
BG289439 bladder, transitional cell papilloma, cell line .a 774 to 1447 1 to 676       676/990
(68 %)		 4 diff
(99.6 %id)
BG257405 embryonal carcinoma, cell line, testis .a 393 to 1059 6 to 667       662/679
(97 %)		 18 diff
(97.4 %id)
BC039001 Testis, embryonal carcinoma .b 1005 to 1719 1 to 715   available from MGC, AAA   715/741
(96 %)		 1 diff
(99.9 %id)
BG390090 embryonal carcinoma, cell line, testis .b 1019 to 1614 1 to 596   available from MGC,   596/596
(100 %)		 0 diff
(100 %id)
BC022891 Testis, embryonal carcinoma .e 1766 to 3362 1 to 1597   tiling clone, available from MGC, AAA   1597/1597
(100 %)		 3 diff
(99.9 %id)
BG504312 embryonal carcinoma, testis .e 1769 to 2488 1 to 722   available from MGC,   722/726
(99 %)		 5 diff
(99.4 %id)
BC070372 Lung, mucoepidermoid carcinoma .a 351 to 850 1 to 500   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 500/532
(93 %)		 0 diff
(100 %id)
BG496417 lung, mucoepidermoid carcinoma .a 350 to 850 1 to 504   available from MGC,   504/518
(97 %)		 5 diff
(99.1 %id)
BC107581 Lung, mucoepidermoid carcinoma .a 347 to 850 1 to 504   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 504/535
(94 %)		 4 diff
(99.3 %id)
BG495874 lung, mucoepidermoid carcinoma .a 350 to 847 1 to 497       497/867
(57 %)		 7 diff
(99.2 %id)
BG542138 lung .j 1 to 768 1 to 770 L44W G45E D46I P47H Q48S ... tiling clone,   770/871
(88 %)		 17 diff
(98.1 %id)
BC020837 Lung, mucoepidermoid carcinoma .g 1 to 1292 6 to 1297 K111R tiling clone, available from MGC, AAA   1297/1297
(100 %)		 3 diff
(99.8 %id)
BG777184 lung, mucoepidermoid carcinoma .g 1 to 688 7 to 694 K111R available from MGC,   694/694
(100 %)		 12 diff
(98.3 %id)
BI768624 pooled lung and spleen .i 1598 to 2389 1 to 781   tiling clone,   781/786
(99 %)		 30 diff
(96.2 %id)
BM015522 breast, mammary adenocarcinoma, cell line .b 2796 to 3232 1 to 437   AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 437/437
(100 %)		 0 diff
(100 %id)
BC038096 Uterus, leiomyosarcoma .a 394 to 853 12 to 471   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 460/529
(86 %)		 1 diff
(99.9 %id)
BM458007 leiomyosarcoma, uterus .a 394 to 853 1 to 460   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 460/1064
(43 %)		 1 diff
(100.0 %id)
BG142261 Islets of Langerhans, Pancreas .d 24 to 732 1 to 709       709/709
(100 %)		 4 diff
(99.5 %id)
BU192157 embryonal carcinoma, cell line, testis .e 1179 to 2080 1 to 902       902/904
(99 %)		 19 diff
(97.9 %id)
BU186714 embryonal carcinoma, cell line, testis .e 73 to 991 1 to 927   available from MGC,   927/927
(100 %)		 17 diff
(98.2 %id)
BQ215037 embryonal carcinoma, cell line, testis .e 1474 to 2211 33 to 780       748/994
(75 %)		 28 diff
(97.2 %id)
BU165449 eye, retinoblastoma .b 1676 to 2498 1 to 823       823/823
(100 %)		 2 diff
(99.8 %id)
BU173345 eye, retinoblastoma .e 84 to 992 1 to 911       911/912
(99 %)		 7 diff
(99.3 %id)
BU567590 testis .f 3 to 808 1 to 822 V88S F89L H90S K91* tiling clone,   822/835
(98 %)		 46 diff
(94.5 %id)
BU940607 mixed (pool of 40 RNAs) .f -9 to 783 1 to 795   tiling clone,   795/795
(100 %)		 15 diff
(98.2 %id)
CX783253 human embryonic stem cells .i 1584 to 2145 591 to 30   tiling clone, AAA   562/562
(100 %)		 2 diff
(99.7 %id)
CX783315 human embryonic stem cells .i 557 to 1392 1 to 836   tiling clone,   836/836
(100 %)		 0 diff
(100 %id)
CF552484 Pooled muscle (cardiac and skeletal) .d 75 to 929 22 to 887       866/892
(97 %)		 30 diff
(96.7 %id)
TI_57180891   .i 1599 to 2389 65 to 844       780/849
(91 %)		 30 diff
(96.5 %id)
TI_59393768   .b 2796 to 3249 88 to 540   tiling clone,   453/666
(68 %)		 2 diff
(99.7 %id)
DA631658 Kidney .a 397 to 926 2 to 531   capped   530/530
(100 %)		 0 diff
(100 %id)
BP306873   .b 1149 to 1728 1 to 581       581/581
(100 %)		 2 diff
(99.7 %id)
NM_021047.2   .d 65 to 2392 1 to 2328 exact RefSeq, AAA   2328/2328
(100 %)		 0 diff
(100 %id)
NM_031218.3   .a 318 to 3111 1 to 2794 exact RefSeq,   2794/2794
(100 %)		 0 diff
(100 %id)
DA705763   .d 78 to 575 2 to 499   capped   498/498
(100 %)		 0 diff
(100 %id)
DA709777   .d 51 to 605 2 to 556   capped   555/555
(100 %)		 0 diff
(100 %id)
DA721697   .a 401 to 632 2 to 233   capped   232/232
(100 %)		 2 diff
(99.2 %id)
DA731541   .d 75 to 825 2 to 755   capped   754/761
(99 %)		 13 diff
(98.3 %id)
AU149679   .a 2658 to 3083 424 to 1       424/426
(99 %)		 5 diff
(98.9 %id)
DA732268   .a 354 to 972 2 to 628   capped   627/643
(97 %)		 11 diff
(98.3 %id)
AU149698   .a 2561 to 3083 519 to 1   tiling clone,   519/519
(100 %)		 10 diff
(98.1 %id)
DA732282   .a 779 to 1514 2 to 738   capped   737/737
(100 %)		 9 diff
(98.8 %id)
AU150137   .b 2401 to 2774 374 to 1       374/374
(100 %)		 2 diff
(99.5 %id)
DA734592   .d 416 to 1140 2 to 726   capped   725/727
(99 %)		 3 diff
(99.6 %id)
DB366706   .d 2065 to 2645 577 to 1       577/577
(100 %)		 13 diff
(97.8 %id)
AU152357   .a 2604 to 3111 506 to 1   tiling clone,   506/549
(92 %)		 6 diff
(99.0 %id)
DA735354   .a 356 to 1094 2 to 739   capped   738/745
(99 %)		 3 diff
(99.6 %id)
AU153236   .a 2578 to 3111 535 to 1       535/535
(100 %)		 10 diff
(98.2 %id)
DA736118   .a 413 to 1328 2 to 913   capped   912/912
(100 %)		 12 diff
(98.7 %id)
AU154192   .a 2590 to 3111 527 to 1       527/532
(99 %)		 11 diff
(98.0 %id)
DA737145   .a 392 to 1220 2 to 831   capped   830/830
(100 %)		 6 diff
(99.3 %id)
DA737849   .d 53 to 926 2 to 874   capped   873/875
(99 %)		 8 diff
(99.1 %id)
DB370470   .d 1998 to 2556 560 to 1       560/562
(99 %)		 3 diff
(99.5 %id)
DA738251   .a 352 to 1176 2 to 826   capped   825/827
(99 %)		 9 diff
(99.0 %id)
DB370848   .a 2564 to 3111 550 to 1   tiling clone,   550/553
(99 %)		 7 diff
(98.8 %id)
DA741500   .a 362 to 933 2 to 573   capped   572/572
(100 %)		 1 diff
(99.9 %id)
DB324730   .a 2579 to 3111 533 to 1   tiling clone,   533/533
(100 %)		 1 diff
(99.9 %id)
DA749175   .d 13 to 581 2 to 570   capped   569/569
(100 %)		 1 diff
(99.9 %id)
DA751972   .d 75 to 650 2 to 576   capped   575/575
(100 %)		 1 diff
(99.9 %id)
DA757825   .a 390 to 926 2 to 538   capped   537/537
(100 %)		 1 diff
(99.9 %id)
DA772559 brain .d 43 to 618 2 to 577   capped   576/576
(100 %)		 1 diff
(99.9 %id)
DA774089 brain .a 319 to 889 2 to 572   capped   571/571
(100 %)		 1 diff
(99.9 %id)
DA776442 brain .d 47 to 616 2 to 571   capped   570/570
(100 %)		 1 diff
(99.9 %id)
DA785894 brain .a 298 to 874 2 to 578   capped   577/577
(100 %)		 2 diff
(99.7 %id)
DA789177 brain .a 352 to 936 2 to 586   capped   585/585
(100 %)		 1 diff
(99.9 %id)
DA789527 brain .d 72 to 650 2 to 582   capped   581/581
(100 %)		 5 diff
(99.2 %id)
DA790815 brain .a 354 to 903 2 to 551   capped   550/550
(100 %)		 1 diff
(99.9 %id)
DA793120 brain .a 352 to 853 2 to 505   capped   504/504
(100 %)		 3 diff
(99.5 %id)
DA795385 brain .a 352 to 898 2 to 547   capped   546/546
(100 %)		 2 diff
(99.7 %id)
DA796482 brain .a 392 to 853 2 to 463   capped   462/462
(100 %)		 1 diff
(99.8 %id)
DA798782 brain .d 74 to 611 2 to 540   capped   539/539
(100 %)		 1 diff
(99.9 %id)
DA805721 brain .d 43 to 587 2 to 546   capped   545/545
(100 %)		 2 diff
(99.7 %id)
BP313095 mammary gland .d 71 to 383 1 to 313       313/583
(53 %)		 2 diff
(99.7 %id)
R47247   .i 876 to 1114 239 to 1       239/240
(99 %)		 0 diff
(100 %id)
CR993539 T-Lymphocytes .d 793 to 1649 1 to 858       858/858
(100 %)		 7 diff
(99.2 %id)
BM761850 lymph node, stomach .a 521 to 797 1 to 277       277/277
(100 %)		 2 diff
(99.3 %id)
BM761875 lymph node, stomach .a 346 to 813 1 to 468       468/468
(100 %)		 2 diff
(99.6 %id)
BM842045 lymph node, stomach .a 346 to 853 1 to 508   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 508/525
(96 %)		 2 diff
(99.7 %id)
BM844223 lymph node, stomach .a 346 to 843 1 to 497       497/497
(100 %)		 4 diff
(99.2 %id)
TI_1948216191   .d 378 to 1226 122 to 979   fully sequenced,   858/979
(87 %)		 14 diff
(98.6 %id)
TI_1948216192   .d 1196 to 1661 584 to 115   fully sequenced,   470/584
(80 %)		 5 diff
(99.2 %id)
TI_1948216346   .d 378 to 1154 124 to 912   fully sequenced,   789/912
(86 %)		 6 diff
(99.4 %id)
TI_1948216347   .d 1124 to 1661 662 to 116   fully sequenced,   547/662
(82 %)		 5 diff
(99.3 %id)
TI_1948216508   .d 379 to 1153 121 to 902       782/1341
(58 %)		 27 diff
(98.0 %id)
TI_1948216663   .d 378 to 1205 121 to 952   fully sequenced,   832/952
(87 %)		 21 diff
(97.8 %id)
TI_1948216664   .d 1175 to 1661 608 to 120   fully sequenced,   489/608
(80 %)		 5 diff
(99.2 %id)
DA918430 small intestine .d 42 to 599 2 to 559   capped   558/558
(100 %)		 1 diff
(99.9 %id)
DA929325 small intestine .d 43 to 602 2 to 561   capped   560/560
(100 %)		 0 diff
(100 %id)
DA941470 Spleen .a 352 to 953 2 to 603   capped   602/602
(100 %)		 0 diff
(100 %id)
DA943216 Spleen .e 52 to 607 2 to 557   capped   556/556
(100 %)		 0 diff
(100 %id)
DA948947 Spleen .d 43 to 598 2 to 557   capped   556/556
(100 %)		 1 diff
(99.9 %id)
DN997896 breast cancer, Mammary gland (cancer tissue) .a 352 to 900 1 to 549       549/549
(100 %)		 4 diff
(99.3 %id)
DN999557   .a 376 to 1058 8 to 690       683/690
(98 %)		 11 diff
(98.5 %id)
DN997734 breast cancer, Mammary gland (cancer tissue) .d 23 to 572 8 to 558       551/558
(98 %)		 6 diff
(99.0 %id)
DN991401 brain, whole brain .d 23 to 696 7 to 680       674/681
(98 %)		 10 diff
(98.6 %id)
DN996316 breast cancer, Mammary gland (cancer tissue) .a 336 to 978 1 to 644   tiling clone,   644/644
(100 %)		 6 diff
(99.1 %id)
DB043290 testis .d 818 to 1388 2 to 573   capped   572/573
(99 %)		 2 diff
(99.7 %id)
DB079621 testis .m 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)		 0 diff
(100 %id)
DB109021 thymus .a 354 to 934 2 to 582   capped   581/581
(100 %)		 0 diff
(100 %id)
DB112838 thymus .a 359 to 937 2 to 580   capped   579/579
(100 %)		 0 diff
(100 %id)
DB125440 thymus .b 619 to 1190 2 to 573   capped   572/572
(100 %)		 2 diff
(99.7 %id)
DB139261 thymus .e 45 to 497 2 to 454   capped   453/453
(100 %)		 0 diff
(100 %id)
DB148623 thymus .b -9 to 459 2 to 471   tiling clone, capped   470/470
(100 %)		 1 diff
(99.8 %id)
DB153588 thymus .a 347 to 933 2 to 588   capped   587/587
(100 %)		 1 diff
(99.9 %id)
DB176349 kidney, tumor tissue .d 47 to 601 2 to 556   capped   555/555
(100 %)		 0 diff
(100 %id)
DB177880 kidney, tumor tissue .d 74 to 627 2 to 555   capped   554/554
(100 %)		 1 diff
(99.9 %id)
DB229582 trachea .d 41 to 630 2 to 591   capped   590/590
(100 %)		 0 diff
(100 %id)
DB234383 trachea .a 389 to 853 2 to 466   capped   465/465
(100 %)		 1 diff
(99.8 %id)
BQ022496 placenta .e 2762 to 2986 242 to 18   AAA   225/225
(100 %)		 1 diff
(99.6 %id)
DB261349 uterus .a 352 to 919 2 to 570   capped   569/569
(100 %)		 1 diff
(99.9 %id)
AF038951 bone marrow .a 346 to 853 1 to 508     Suspected internal deletion, this clone was ignored 508/525
(96 %)		 2 diff
(99.7 %id)
AK022550   .a 346 to 853 1 to 508   available from FLJ, This clone was ignored 508/525
(96 %)		 2 diff
(99.7 %id)
AK074757   .a 346 to 843 1 to 497   available from FLJ, Suspected internal deletion, this clone was ignored 497/497
(100 %)		 4 diff
(99.2 %id)
AK096342   .a 346 to 843 1 to 497   available from FLJ, Suspected internal deletion, this clone was ignored 497/497
(100 %)		 4 diff
(99.2 %id)
TI_1971556323   .d 378 to 1226 122 to 979     This clone was ignored 858/979
(87 %)		 14 diff
(98.6 %id)
DA407997 thalamus .d 1196 to 1661 584 to 115   capped This clone was ignored 470/584
(80 %)		 5 diff
(99.2 %id)
DB312452 thalamus .d 378 to 1154 124 to 912     This clone was ignored 789/912
(86 %)		 6 diff
(99.4 %id)
BX107128 melanocyte .d 1124 to 1661 662 to 116     This clone was ignored 547/662
(82 %)		 5 diff
(99.3 %id)
CR590630 fetal brain .d 379 to 1153 121 to 902     Suspected internal deletion, this clone was ignored 782/1341
(58 %)		 27 diff
(98.0 %id)
BX419616 brain, fetal brain .d 378 to 1205 121 to 952     Suspected internal deletion, this clone was ignored 832/952
(87 %)		 21 diff
(97.8 %id)
BM800562 leiomyosarcoma, uterus .d 1175 to 1661 608 to 120     Suspected internal deletion, this clone was ignored 489/608
(80 %)		 5 diff
(99.2 %id)
BM994096.
matches multiple genes		 lung, Metastatic Chondrosarcoma .d 42 to 599 2 to 559   AAA Suspected internal deletion, this clone was ignored, also hits gene wahama 558/558
(100 %)		 1 diff
(99.9 %id)
BM994096.
matches multiple genes		 lung, Metastatic Chondrosarcoma .d 43 to 602 2 to 561   AAA Suspected internal deletion, this clone was ignored, also hits gene wahama 560/560
(100 %)		 0 diff
(100 %id)
BC053607 Testis, embryonal carcinoma .a 352 to 953 2 to 603   available from MGC, AAA Suspected internal deletion, this clone was ignored 602/602
(100 %)		 0 diff
(100 %id)
AU123664   .e 52 to 607 2 to 557   capped This clone was ignored 556/556
(100 %)		 0 diff
(100 %id)
DA948947 Spleen .d 43 to 598 2 to 557   capped   556/556
(100 %)		 1 diff
(99.9 %id)
DN997896 breast cancer, Mammary gland (cancer tissue) .a 352 to 900 1 to 549       549/549
(100 %)		 4 diff
(99.3 %id)
DN997896 breast cancer, Mammary gland (cancer tissue) .a 352 to 900 1 to 549       549/549
(100 %)		 4 diff
(99.3 %id)
DN999557   .a 376 to 1058 8 to 690       683/690
(98 %)		 11 diff
(98.5 %id)
DN997734 breast cancer, Mammary gland (cancer tissue) .d 23 to 572 8 to 558       551/558
(98 %)		 6 diff
(99.0 %id)
DN997734 breast cancer, Mammary gland (cancer tissue) .d 23 to 572 8 to 558       551/558
(98 %)		 6 diff
(99.0 %id)
DN991401 brain, whole brain .d 23 to 696 7 to 680       674/681
(98 %)		 10 diff
(98.6 %id)
DN991401 brain, whole brain .d 23 to 696 7 to 680       674/681
(98 %)		 10 diff
(98.6 %id)
DN996316 breast cancer, Mammary gland (cancer tissue) .a 336 to 978 1 to 644   tiling clone,   644/644
(100 %)		 6 diff
(99.1 %id)
DN996316 breast cancer, Mammary gland (cancer tissue) .a 336 to 978 1 to 644   tiling clone,   644/644
(100 %)		 6 diff
(99.1 %id)
DB043290 testis .d 818 to 1388 2 to 573   capped   572/573
(99 %)		 2 diff
(99.7 %id)
DB079621 testis .m 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)		 0 diff
(100 %id)
DB109021 thymus .a 354 to 934 2 to 582   capped   581/581
(100 %)		 0 diff
(100 %id)
DB112838 thymus .a 359 to 937 2 to 580   capped   579/579
(100 %)		 0 diff
(100 %id)
DB125440 thymus .b 619 to 1190 2 to 573   capped   572/572
(100 %)		 2 diff
(99.7 %id)
DB139261 thymus .e 45 to 497 2 to 454   capped   453/453
(100 %)		 0 diff
(100 %id)
DB148623 thymus .b -9 to 459 2 to 471   tiling clone, capped   470/470
(100 %)		 1 diff
(99.8 %id)
DB153588 thymus .a 347 to 933 2 to 588   capped   587/587
(100 %)		 1 diff
(99.9 %id)
DB176349 kidney, tumor tissue .d 47 to 601 2 to 556   capped   555/555
(100 %)		 0 diff
(100 %id)
DB177880 kidney, tumor tissue .d 74 to 627 2 to 555   capped   554/554
(100 %)		 1 diff
(99.9 %id)
DB229582 trachea .d 41 to 630 2 to 591   capped   590/590
(100 %)		 0 diff
(100 %id)
DB234383 trachea .a 389 to 853 2 to 466   capped   465/465
(100 %)		 1 diff
(99.8 %id)
BQ022496 placenta .e 2762 to 2986 242 to 18   AAA   225/225
(100 %)		 1 diff
(99.6 %id)
DB261349 uterus .a 352 to 919 2 to 570   capped   569/569
(100 %)		 1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC