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Gene ZMYM1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
106 supporting clones for gene ZMYM1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK299779 brain .a 1 to 3939 1 to 3941 A21G S22R L23P R24* tiling clone,   3941/3941
(100 %)
4 diff
(99.9 %id)
DC376778 brain .a 1 to 550 1 to 552       552/552
(100 %)
1 diff
(99.9 %id)
CD683862 normal nasopharynx .a 4 to 652 19 to 668       646/668
(96 %)
6 diff
(99.2 %id)
BX472981   .a 8 to 526 1 to 523       523/523
(100 %)
7 diff
(98.7 %id)
NM_024772.3   .b 1 to 4170 1 to 4172 exact RefSeq,   4172/4172
(100 %)
1 diff
(100.0 %id)
BX473043   .b 9 to 441 1 to 435   tiling clone,   435/435
(100 %)
2 diff
(99.6 %id)
CD696667 normal nasopharynx .b 12 to 418 34 to 443       406/443
(91 %)
7 diff
(98.5 %id)
DB186326 liver, tumor tissue .b 16 to 593 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DB216372 trachea .b 16 to 555 2 to 545   tiling clone, capped   544/544
(100 %)
3 diff
(99.5 %id)
DA865085 placenta .b 17 to 605 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
BX537537 human heart .b 20 to 4171 1 to 4152 V73M I95F L96S Q97R K98R ... tiling clone, available from DKFZ, AAA   4152/4152
(100 %)
5 diff
(99.9 %id)
DW443862 Liver .b 36 to 244 18 to 228       207/228
(90 %)
11 diff
(95.2 %id)
TI_1948087554   .b 139 to 1039 130 to 1038       909/1487
(61 %)
26 diff
(98.3 %id)
TI_1948087718   .b 147 to 1064 143 to 1058       918/1340
(68 %)
44 diff
(96.8 %id)
TI_1948087893   .b 147 to 1064 138 to 1053       916/1319
(69 %)
18 diff
(98.7 %id)
TI_1948088069   .b 147 to 951 131 to 931       801/1363
(58 %)
15 diff
(98.9 %id)
DB133236 thymus .b 1310 to 1893 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
CN397981 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1478 to 2128 1 to 651       651/651
(100 %)
0 diff
(100 %id)
CV569567 cornea, eye .b 1549 to 2168 1 to 620       620/620
(100 %)
0 diff
(100 %id)
CA455078   .b 1677 to 2561 1 to 893       893/893
(100 %)
8 diff
(99.2 %id)
TI_1948088070   .b 1755 to 2853 1225 to 123       1103/1333
(82 %)
0 diff
(100 %id)
CB131944 Liver .b 1820 to 2315 1 to 496       496/496
(100 %)
0 diff
(100 %id)
DT219819 brain .b 1825 to 2353 1 to 529       529/529
(100 %)
0 diff
(100 %id)
FN146963 breast carcinoma .b 1827 to 1938 110 to 1     Submitted on the opposite strand 110/121
(90 %)
2 diff
(98.4 %id)
TI_1948087894   .b 1879 to 2853 1090 to 122       969/1319
(73 %)
0 diff
(100 %id)
TI_1948087555   .b 1962 to 2853 993 to 93       901/1324
(68 %)
0 diff
(100 %id)
BU561365 testis .b 2015 to 2727 1 to 723       723/796
(90 %)
17 diff
(97.9 %id)
BU567393 testis .b 2015 to 2739 1 to 738       738/805
(91 %)
15 diff
(98.2 %id)
BU568057 testis .b 2015 to 2820 1 to 810       810/811
(99 %)
10 diff
(98.8 %id)
BU568340 testis .b 2015 to 2727 1 to 727       727/758
(95 %)
16 diff
(97.9 %id)
BU569739 testis .b 2015 to 2692 1 to 681       681/752
(90 %)
5 diff
(99.4 %id)
BU852345 testis .b 2015 to 2808 1 to 800       800/805
(99 %)
10 diff
(98.8 %id)
BU852791 testis .b 2015 to 2552 1 to 550       550/782
(70 %)
37 diff
(95.3 %id)
BU853016 testis .b 2015 to 2728 1 to 726       726/773
(93 %)
18 diff
(97.7 %id)
BU853753 testis .b 2015 to 2741 1 to 733       733/771
(95 %)
21 diff
(97.3 %id)
BU854244 testis .b 2015 to 2714 1 to 707       707/793
(89 %)
10 diff
(98.8 %id)
BU854264 testis .b 2015 to 2609 1 to 608       608/855
(71 %)
22 diff
(97.5 %id)
BU854440 testis .b 2015 to 2789 1 to 783       783/783
(100 %)
19 diff
(97.6 %id)
BU570450 testis .b 2015 to 2797 1 to 800       800/804
(99 %)
25 diff
(96.9 %id)
CK130281 mixed .b 2186 to 2855 1 to 665       665/729
(91 %)
11 diff
(98.5 %id)
AK026804 Human lung .b 2190 to 4172 1 to 1983   available from FLJ, AAA   1983/1983
(100 %)
2 diff
(99.9 %id)
BP292882 lung .b 2190 to 2771 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP293106 lung .b 2190 to 2771 1 to 582       582/582
(100 %)
0 diff
(100 %id)
TI_1948087719   .b 2202 to 2853 784 to 130       655/1459
(44 %)
0 diff
(100 %id)
FN124950 breast carcinoma .b 2293 to 2377 1 to 86       86/86
(100 %)
3 diff
(96.6 %id)
BP229076 brain .b 2555 to 3137 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BM552225 leiomyosarcoma, uterus .b 2584 to 3543 1 to 974       974/1015
(95 %)
21 diff
(98.0 %id)
BP376803 uterus .b 2589 to 3135 1 to 549       549/552
(99 %)
24 diff
(95.7 %id)
BF914062 uterus_tumor .b 2849 to 2951 103 to 1     Submitted on the opposite strand 103/103
(100 %)
1 diff
(99.1 %id)
CB132609 Liver .b 2864 to 3491 1 to 628       628/628
(100 %)
0 diff
(100 %id)
DB344778 thymus .b 3610 to 4172 562 to 1   tiling clone,   562/562
(100 %)
1 diff
(99.9 %id)
BI548355 brain, hippocampus .c 1 to 796 2 to 802   available from MGC,   802/802
(100 %)
15 diff
(98.2 %id)
BI548592 brain, hippocampus .c 1 to 650 2 to 652       652/652
(100 %)
11 diff
(98.4 %id)
DB068092 testis .c 1 to 552 2 to 556   tiling clone, capped   555/555
(100 %)
3 diff
(99.5 %id)
BC037313 Brain, hippocampus .c 4 to 4202 5 to 4206 L900F S901I S902I E903* tiling clone, available from MGC, AAA   4202/4202
(100 %)
4 diff
(100.0 %id)
TI_44167094   .c 6 to 650 99 to 744       646/744
(86 %)
10 diff
(98.7 %id)
TI_44167175   .c 6 to 796 111 to 906       796/906
(87 %)
15 diff
(98.4 %id)
DA180400 amygdala .c 2935 to 3492 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CK032889 mixed .c 2971 to 3730 771 to 13     Submitted on the opposite strand 759/771
(98 %)
0 diff
(100 %id)
BG614996 embryonal carcinoma, testis .c 3065 to 3799 1 to 744       744/857
(86 %)
20 diff
(97.7 %id)
BP338027 Spleen .c 3237 to 3815 1 to 579       579/579
(100 %)
0 diff
(100 %id)
CN397980 embryonic stem cells, cell lines H1, H7, andH9 .c 3313 to 3576 1 to 264       264/264
(100 %)
2 diff
(99.3 %id)
BE328639 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 3368 to 3865 497 to 1       497/500
(99 %)
12 diff
(97.6 %id)
AA453867 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3519 to 3900 1 to 382   fully sequenced,   382/382
(100 %)
0 diff
(100 %id)
BQ574726 Chondrosarcoma Grade II, Left Pelvis .c 3529 to 4205 694 to 19   AAA   676/676
(100 %)
2 diff
(99.8 %id)
AA089659   .c 3533 to 3786 1 to 247       247/247
(100 %)
9 diff
(96.4 %id)
AW197345 pooled germ cell tumors .c 3542 to 3945 413 to 10       404/413
(97 %)
0 diff
(100 %id)
Z33449   .c 3548 to 3963 1 to 419       419/419
(100 %)
3 diff
(99.3 %id)
FN067026 breast carcinoma .c 3678 to 3782 102 to 1     Submitted on the opposite strand 102/103
(99 %)
3 diff
(97.1 %id)
AW593217 pooled .c 3699 to 4208 513 to 4       510/513
(99 %)
0 diff
(100 %id)
AI093135 heart .c 3714 to 4208 497 to 4       494/497
(99 %)
0 diff
(100 %id)
FN131993 breast carcinoma .c 3719 to 3840 1 to 121       121/121
(100 %)
1 diff
(99.2 %id)
G36777   .c 3810 to 4206 403 to 1     Submitted on the opposite strand 403/451
(89 %)
8 diff
(98.3 %id)
W61156 heart .c 3810 to 4206 403 to 1       403/451
(89 %)
8 diff
(98.3 %id)
AA905104 pooled .c 3822 to 4224 425 to 23   AAA   403/403
(100 %)
3 diff
(99.3 %id)
CA310982 Human Lung Epithelial cells, lung .c 3852 to 4205 14 to 367   AAA Submitted on the opposite strand 354/367
(96 %)
7 diff
(98.1 %id)
CA311017 Human Lung Epithelial cells, lung .c 3852 to 4205 14 to 367   AAA Submitted on the opposite strand 354/367
(96 %)
7 diff
(98.1 %id)
AA453782 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3870 to 4202 332 to 1   fully sequenced,   332/332
(100 %)
1 diff
(99.7 %id)
AW276555 lung, two pooled squamous cell carcinomas .c 3880 to 4202 342 to 19   AAA   324/324
(100 %)
2 diff
(99.4 %id)
AA724699 parathyroid gland, parathyroid tumor .c 3901 to 4208 309 to 4       306/309
(99 %)
0 diff
(100 %id)
W48559 senescent fibroblast .c 4093 to 4554 1 to 464   tiling clone,   464/464
(100 %)
4 diff
(99.2 %id)
AA284259 senescent fibroblast .c 4110 to 4685 1 to 575     Submitted on the opposite strand 575/575
(100 %)
4 diff
(99.4 %id)
W48560 senescent fibroblast .c 4354 to 4767 415 to 1   tiling clone,   415/415
(100 %)
2 diff
(99.6 %id)
T85532.
matches multiple genes
liver and spleen .c 4358 to 4719 1 to 367   tiling clone, also hits gene klurerbo 367/408
(89 %)
10 diff
(97.6 %id)
T85317.
matches multiple genes
liver and spleen .c 4458 to 4743 298 to 7     also hits gene klurerbo 292/341
(85 %)
0 diff
(100 %id)
BX648307 human fetal kidney .d 1 to 3980 1 to 3982 S256P E439G N701S T808A tiling clone, available from DKFZ, AAA   3982/3982
(100 %)
11 diff
(99.8 %id)
DA857880 placenta .e 1 to 546 2 to 548   tiling clone, to resequence, capped   547/547
(100 %)
1 diff
(99.9 %id)
DB147822 thymus .e 1247 to 1806 2 to 562   tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DB328946 placenta .e 3898 to 4449 552 to 1   tiling clone, to resequence,   552/552
(100 %)
2 diff
(99.7 %id)
DB345872 thymus .e 4152 to 4691 541 to 1   tiling clone,   541/541
(100 %)
3 diff
(99.5 %id)
DB089582 testis .f 1 to 560 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
AK125741 testis .f 472 to 2296 1 to 1825 exact tiling clone, available from FLJ,   1825/1825
(100 %)
0 diff
(100 %id)
DB050458 testis .f 473 to 1039 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DR005719 Prostate .f 844 to 1428 1 to 585       585/585
(100 %)
5 diff
(99.2 %id)
CV024847 mixed .f 912 to 1565 1 to 650       650/675
(96 %)
10 diff
(98.6 %id)
EH321575   .f 1494 to 1571 1 to 79       79/79
(100 %)
1 diff
(98.8 %id)
DB338530 testis .f 1788 to 2296 509 to 1       509/509
(100 %)
0 diff
(100 %id)
AK096206   .g 1 to 3055 1 to 3058 V124M I146N L147S Q148P K149E ... tiling clone, available from FLJ,   3058/3058
(100 %)
3 diff
(100.0 %id)
DA116057 cerebellum .g 2 to 565 2 to 567   tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
DA661439   .g 2 to 581 2 to 584   capped   583/583
(100 %)
3 diff
(99.5 %id)
DB321905   .g 2533 to 3055 527 to 1       527/528
(99 %)
5 diff
(99.1 %id)
Z78297 brain, Prostate .h 164 to 568 212 to 616   tiling clone,   612/616
(99 %)
10 diff
(98.4 %id)
BF242500 bone marrow, from acute myelogenous leukemia .h 334 to 810 55 to 529   tiling clone,   558/880
(63 %)
22 diff
(97.5 %id)
AK308655 cerebellum .i 1 to 1006 1 to 1008 V124M tiling clone,   1008/1008
(100 %)
2 diff
(99.9 %id)
BX498292 Liver .j 1 to 600 1 to 599 V17A H91T S92L A93L N94T ... tiling clone,   599/599
(100 %)
6 diff
(99.0 %id)
DB096812 testis .k 1 to 589 9 to 597 V73M tiling clone, capped   589/589
(100 %)
1 diff
(99.9 %id)
DR005519 Prostate .l 1 to 393 8 to 402 S109L L111F tiling clone,   395/402
(98 %)
9 diff
(97.8 %id)
DW414304 Liver .m 1 to 297 18 to 316 A7G S8R L9P R10* tiling clone,   295/316
(93 %)
6 diff
(98.2 %id)
CD692609 normal nasopharynx .n 1 to 504 35 to 541 A13G S14R L15P R16* tiling clone,   507/541
(93 %)
6 diff
(98.9 %id)
EH351218   .n 454 to 533 1 to 79   tiling clone,   79/79
(100 %)
1 diff
(98.8 %id)
CD654180 Embryonic Stem cells .o-u 1 to 746 12 to 750 exact tiling clone,   739/808
(91 %)
6 diff
(99.3 %id)
BF171522 blood Gene ZMYM1, variant not shown         This clone was ignored    
BG209884.
matches multiple genes
  Gene ZMYM1, variant not shown         This clone was ignored, also hits gene lurubo    
BG209884.
matches multiple genes
  Gene lurubo, variant not shown         This clone was ignored, also hits gene lurubo    
CN414370 embryonic stem cells, DMSO-treated H9 cellline Gene ZMYM1, variant not shown         This clone was ignored    
CR936813 uterus Gene ZMYM1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
T27122   Gene ZMYM1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C