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Gene ZFYVE9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
135 supporting clones for gene ZFYVE9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DR002597 fetal brain .a 1 to 701 1 to 701   tiling clone,   701/701
(100 %)
2 diff
(99.8 %id)
DR005493 Prostate .a 92 to 813 1 to 721       721/723
(99 %)
6 diff
(99.2 %id)
DB489628 hypothalamus .a 153 to 619 1 to 465       465/465
(100 %)
15 diff
(96.8 %id)
NM_004799.2   .a 374 to 5287 1 to 4914 exact RefSeq, AAA   4914/4914
(100 %)
0 diff
(100 %id)
DR005886 Prostate .a 385 to 840 1 to 455       455/455
(100 %)
5 diff
(99.0 %id)
AW004975 colon .a 388 to 579 1 to 192     Submitted on the opposite strand 192/192
(100 %)
0 diff
(100 %id)
AI809186 B-cell, chronic lymphotic leukemia .a 398 to 854 1 to 457     Submitted on the opposite strand 457/457
(100 %)
9 diff
(98.1 %id)
AW452917   .a 398 to 608 10 to 220     Submitted on the opposite strand 211/220
(95 %)
7 diff
(96.9 %id)
BF058621 fibrotheoma, ovary .a 399 to 836 1 to 435     Submitted on the opposite strand 435/439
(99 %)
14 diff
(96.9 %id)
AI207521 Liver .a 406 to 996 593 to 1       593/604
(98 %)
6 diff
(99.1 %id)
AW390991 stomach .a 407 to 739 344 to 15       330/344
(95 %)
11 diff
(96.9 %id)
AF104304   .a 415 to 5235 1 to 4822 D13G K14Q V15G L16V D17R ... AAA   4822/4822
(100 %)
3 diff
(100.0 %id)
H97939 melanocyte .a 415 to 1022 1 to 606     Submitted on the opposite strand 606/610
(99 %)
7 diff
(98.9 %id)
AW609496 stomach .a 417 to 747 10 to 337       329/344
(95 %)
11 diff
(96.9 %id)
BQ362912 stomach .a 508 to 739 16 to 248       233/251
(92 %)
12 diff
(95.3 %id)
DR432894 mixed .a 541 to 1258 1 to 710       710/713
(99 %)
18 diff
(97.5 %id)
DR432560 mixed .a 541 to 1236 1 to 696       696/697
(99 %)
7 diff
(99.0 %id)
DR432998 mixed .a 541 to 1258 1 to 710       710/712
(99 %)
14 diff
(98.1 %id)
DR432767 mixed .a 541 to 1301 1 to 760       760/845
(89 %)
15 diff
(98.3 %id)
DR433184 mixed .a 541 to 1167 1 to 615       615/681
(90 %)
18 diff
(97.4 %id)
BC032680 Testis, embryonal carcinoma .a 543 to 5287 9 to 4753 exact tiling clone, available from MGC, AAA   4745/4745
(100 %)
0 diff
(100 %id)
CV030862 mixed .a 546 to 1105 1 to 570       570/570
(100 %)
24 diff
(95.8 %id)
BM463429 embryonal carcinoma, cell line, testis .a 546 to 1552 1 to 1010       1010/1010
(100 %)
22 diff
(97.9 %id)
TI_1948150767   .a 546 to 1400 128 to 993       866/1340
(64 %)
32 diff
(97.7 %id)
TI_1948150768   .a 546 to 1254 125 to 834       710/1007
(70 %)
8 diff
(99.3 %id)
TI_1948151033   .a 546 to 1266 129 to 861       733/1382
(53 %)
36 diff
(97.4 %id)
TI_1948151034   .a 546 to 1237 123 to 817       695/1018
(68 %)
11 diff
(99.0 %id)
TI_1948151309   .a 546 to 1508 130 to 1100       971/1311
(74 %)
44 diff
(96.7 %id)
TI_1948151310   .a 546 to 1328 126 to 917       792/955
(82 %)
20 diff
(98.0 %id)
TI_1948151594   .a 546 to 1355 128 to 933       806/1252
(64 %)
35 diff
(97.3 %id)
TI_1948151595   .a 546 to 1341 121 to 922       802/954
(84 %)
15 diff
(98.5 %id)
BF846574 lung_normal .a 685 to 1105 440 to 22     Submitted on the opposite strand 419/450
(93 %)
0 diff
(100 %id)
BQ329647 lung_normal .a 685 to 1105 440 to 22       419/450
(93 %)
0 diff
(100 %id)
AB209125 brain .a 820 to 5235 1 to 4416       4416/4416
(100 %)
1 diff
(100.0 %id)
BE082534 breast .a 996 to 1432 10 to 446       437/447
(97 %)
6 diff
(98.7 %id)
BE082533 breast .a 1009 to 1437 1 to 429       429/429
(100 %)
9 diff
(98.0 %id)
BG536226 lung .a 1032 to 1671 1 to 643       643/657
(97 %)
11 diff
(98.4 %id)
DA804871 brain .a 1078 to 1609 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
AI632587 pooled germ cell tumors .a 1227 to 1794 568 to 1       568/568
(100 %)
1 diff
(99.9 %id)
AI797623 pooled .a 1329 to 1794 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
BX096354 uterus .a 1347 to 1990 1 to 644       644/644
(100 %)
6 diff
(99.1 %id)
AA147530 uterus .a 1350 to 1682 13 to 351   fully sequenced,   339/351
(96 %)
7 diff
(98.1 %id)
BM716723 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1350 to 2020 1 to 669       669/669
(100 %)
2 diff
(99.8 %id)
BF671658 muscle (skeletal) .a 1374 to 2043 1 to 666       666/906
(73 %)
13 diff
(98.6 %id)
CB047955 Prostate .a 1416 to 1971 10 to 565       556/565
(98 %)
6 diff
(99.0 %id)
AW614993 Kidney .a 1464 to 2058 592 to 1       592/592
(100 %)
0 diff
(100 %id)
AW301671 Kidney .a 1518 to 2056 541 to 3       539/541
(99 %)
0 diff
(100 %id)
CB048575 Prostate .a 1594 to 2120 595 to 69       527/595
(88 %)
0 diff
(100 %id)
BE048597 Kidney .a 1619 to 2061 443 to 1       443/443
(100 %)
0 diff
(100 %id)
DB292465 uterus .a 1625 to 2227 2 to 604   capped   603/603
(100 %)
0 diff
(100 %id)
AA156466 uterus .a 1652 to 2058 408 to 1   fully sequenced,   408/408
(100 %)
0 diff
(100 %id)
BF510071   .a 1674 to 2067 399 to 6   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 394/409
(96 %)
0 diff
(100 %id)
DA248814 brain .a 1686 to 2278 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
AI201730 Prostate .a 1697 to 2120 453 to 30   AAA   424/439
(96 %)
0 diff
(100 %id)
DB275884 uterus .a 1771 to 2342 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AW377196 colon .a 1928 to 2387 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AW377178 colon .a 2035 to 2447 417 to 4       414/417
(99 %)
0 diff
(100 %id)
BE082543 breast .a 2226 to 2357 132 to 1     Submitted on the opposite strand 132/142
(92 %)
1 diff
(99.3 %id)
AW580326 head_neck .a 2410 to 2910 511 to 9       503/522
(96 %)
3 diff
(99.5 %id)
AA312775   .a 2453 to 2725 1 to 273       273/320
(85 %)
1 diff
(99.7 %id)
BQ339964 nervous_normal .a 2471 to 3048 1 to 580       580/642
(90 %)
28 diff
(95.7 %id)
BF961623 nervous_normal .a 2476 to 2918 7 to 449       443/449
(98 %)
6 diff
(98.7 %id)
BQ340252 nervous_normal .a 2476 to 3050 574 to 1       574/598
(95 %)
5 diff
(99.2 %id)
BF960281 nervous_normal .a 2481 to 2653 12 to 190       179/190
(94 %)
6 diff
(96.9 %id)
BI035332 nervous_normal .a 2482 to 3020 1 to 539       539/539
(100 %)
4 diff
(99.3 %id)
BQ340247 nervous_normal .a 2482 to 3050 1 to 569       569/569
(100 %)
5 diff
(99.2 %id)
AW889576 nervous_tumor .a 2524 to 2688 158 to 1       158/163
(96 %)
15 diff
(90.8 %id)
BQ339930 nervous_normal .a 2545 to 3000 84 to 539       456/544
(83 %)
8 diff
(98.6 %id)
BF953986 nervous_normal .a 2556 to 3063 510 to 1       510/510
(100 %)
7 diff
(98.7 %id)
BF090054 nervous_normal .a 2558 to 3054 498 to 4       495/498
(99 %)
4 diff
(99.2 %id)
BF735457 amnion_normal .a 2699 to 3126 448 to 23     Submitted on the opposite strand 426/448
(95 %)
3 diff
(99.4 %id)
BF961624 nervous_normal .a 2739 to 3050 1 to 311       311/311
(100 %)
2 diff
(99.4 %id)
CN407487 embryonic stem cells, DMSO-treated H9 cellline .a 2843 to 3552 9 to 719       711/719
(98 %)
10 diff
(98.7 %id)
BQ338840 nervous_normal .a 2900 to 3390 495 to 1       495/495
(100 %)
26 diff
(94.8 %id)
BE843202 testis_normal .a 3255 to 3401 12 to 157       146/159
(91 %)
7 diff
(95.6 %id)
CD624051   .a 3474 to 4254 8 to 790       781/791
(98 %)
6 diff
(99.3 %id)
CD624053   .a 3474 to 4192 8 to 726       719/726
(99 %)
0 diff
(100 %id)
CD624054   .a 3474 to 4257 786 to 3       784/793
(98 %)
2 diff
(99.8 %id)
CD624061   .a 3474 to 4217 8 to 751       744/751
(99 %)
0 diff
(100 %id)
CD624062   .a 3474 to 4254 780 to 1       780/787
(99 %)
6 diff
(99.3 %id)
CD624063   .a 3474 to 3916 8 to 449       442/449
(98 %)
8 diff
(98.3 %id)
CD624064   .a 3474 to 4257 786 to 3       784/796
(98 %)
2 diff
(99.8 %id)
CD624052   .a 3480 to 4254 772 to 1       772/772
(100 %)
4 diff
(99.5 %id)
BI334801 cervical carcinoma cell line, cervix .a 3651 to 4392 1 to 751       747/751
(99 %)
16 diff
(97.9 %id)
BI333812 cervical carcinoma cell line, cervix .a 3651 to 4394 1 to 745       745/750
(99 %)
3 diff
(99.6 %id)
BF364761 nervous_normal .a 3695 to 4237 14 to 568       555/568
(97 %)
32 diff
(94.4 %id)
BF364762 nervous_normal .a 3699 to 4302 612 to 13       600/612
(98 %)
6 diff
(99.1 %id)
TI_1948151312   .a 3796 to 4826 1145 to 125       1021/1319
(77 %)
18 diff
(98.7 %id)
CR747691 epithelioid carcinoma, Pancreas .a 3844 to 4337 11 to 504       494/504
(98 %)
6 diff
(98.9 %id)
BQ421818 epithelioid carcinoma, Pancreas .a 3846 to 4647 1 to 815       815/941
(86 %)
22 diff
(97.7 %id)
TI_1948150770   .a 3870 to 4826 1094 to 133       962/1370
(70 %)
29 diff
(97.9 %id)
BF364774 nervous_normal .a 3884 to 4296 481 to 69       413/481
(85 %)
0 diff
(100 %id)
AI124859 brain, pooled frontal lobe .a 3901 to 4319 423 to 5       419/424
(98 %)
15 diff
(96.5 %id)
CD624060   .a 3920 to 4260 1 to 340       340/340
(100 %)
8 diff
(97.7 %id)
CD624059   .a 3926 to 4257 333 to 3       331/339
(97 %)
0 diff
(100 %id)
TI_1948150769   .a 3982 to 4826 965 to 120       846/1189
(71 %)
4 diff
(99.7 %id)
TI_1948151311   .a 3982 to 4826 964 to 123       842/1196
(70 %)
6 diff
(99.5 %id)
TI_1948151596   .a 3982 to 4826 972 to 124       849/1204
(70 %)
9 diff
(99.3 %id)
TI_1948151597   .a 3982 to 4826 971 to 129       843/1319
(63 %)
11 diff
(99.2 %id)
TI_1948151036   .a 3983 to 4826 969 to 126       842/1336
(63 %)
16 diff
(98.9 %id)
CD624055   .a 4004 to 4260 8 to 264       257/264
(97 %)
8 diff
(97.0 %id)
CD624056   .a 4004 to 4257 256 to 3       254/263
(96 %)
0 diff
(100 %id)
CD624057   .a 4004 to 4260 8 to 264       257/264
(97 %)
8 diff
(97.0 %id)
CD624058   .a 4004 to 4257 256 to 3       254/263
(96 %)
0 diff
(100 %id)
CD624066   .a 4004 to 4260 8 to 264       257/264
(97 %)
8 diff
(97.0 %id)
CD624067   .a 4004 to 4257 256 to 3       254/263
(96 %)
0 diff
(100 %id)
DT218942 brain .a 4015 to 4598 1 to 584       584/584
(100 %)
0 diff
(100 %id)
TI_1948151035   .a 4041 to 4826 911 to 122       790/1217
(64 %)
7 diff
(99.5 %id)
CB049545 Prostate .a 4109 to 4758 6 to 654       649/654
(99 %)
7 diff
(99.0 %id)
BE718095 head_neck .a 4110 to 4302 202 to 10       193/202
(95 %)
0 diff
(100 %id)
DR432891 mixed .a 4133 to 4826 685 to 2       684/690
(99 %)
16 diff
(97.7 %id)
DR432562 mixed .a 4162 to 4826 667 to 2       666/667
(99 %)
1 diff
(99.9 %id)
DR432992 mixed .a 4214 to 4815 606 to 7       600/675
(88 %)
2 diff
(99.8 %id)
BG676689 skin, squamous cell carcinoma .a 4227 to 4936 1 to 728       728/955
(76 %)
33 diff
(96.6 %id)
EG328733 pooled .a 4315 to 4696 383 to 2     Submitted on the opposite strand 382/383
(99 %)
0 diff
(100 %id)
EG328748 pooled .a 4315 to 4467 153 to 1     Submitted on the opposite strand 153/153
(100 %)
1 diff
(99.4 %id)
EG328732 pooled .a 4348 to 4729 1 to 381       381/381
(100 %)
1 diff
(99.8 %id)
EG328747 pooled .a 4375 to 4729 1 to 355       355/355
(100 %)
6 diff
(98.4 %id)
BF812545 colon_ins .a 4390 to 4544 155 to 1     Submitted on the opposite strand 155/155
(100 %)
0 diff
(100 %id)
BF439490 pooled .a 4575 to 5235 673 to 12   AAA   662/662
(100 %)
3 diff
(99.6 %id)
AA187401   .a 4788 to 5229 1 to 442       442/442
(100 %)
0 diff
(100 %id)
AI609010 normal gingiva (cell line from primarykeratinocytes) .a 4811 to 5236 427 to 2       426/427
(99 %)
0 diff
(100 %id)
AI652765 pooled germ cell tumors .a 4988 to 5236 255 to 7       249/255
(97 %)
0 diff
(100 %id)
AI983120 pooled germ cell tumors .a 4988 to 5236 255 to 7       249/255
(97 %)
0 diff
(100 %id)
AI918656 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 5070 to 5244 194 to 20   AAA   175/175
(100 %)
0 diff
(100 %id)
AW614053 pooled germ cell tumors .a 5121 to 5236 123 to 8       116/123
(94 %)
0 diff
(100 %id)
AF130419 brain .b 1 to 4567 1 to 4565 E1185D M1186E K1187G D1188L F1189H ... tiling clone,   4565/4565
(100 %)
2 diff
(100.0 %id)
NM_007324.2   .b 1 to 4737 1 to 4737 exact RefSeq, AAA   4737/4737
(100 %)
0 diff
(100 %id)
BX646047   .b 2041 to 2557 1 to 517       517/517
(100 %)
0 diff
(100 %id)
AF130420 brain .c 1 to 2625 1 to 2625 exact tiling clone,   2625/2625
(100 %)
0 diff
(100 %id)
NM_007323.1   .c 1 to 2625 1 to 2625 exact RefSeq,   2625/2625
(100 %)
0 diff
(100 %id)
AI028235   .d 1 to 859 863 to 3 F6S R9S R11G L14C G16E ... tiling clone,   861/873
(98 %)
17 diff
(98.1 %id)
BX098836 colon .e-u 1 to 711 1 to 711 exact tiling clone,   711/711
(100 %)
0 diff
(100 %id)
AA508754 colon .e-u 560 to 1005 446 to 1   tiling clone,   446/446
(100 %)
0 diff
(100 %id)
AV705707 adrenal gland Gene ZFYVE9, variant not shown         Suspected internal deletion, this clone was ignored    
BE078439 breast Gene ZFYVE9, variant not shown         This clone was ignored    
BX280280 pooled germ cell tumors Gene ZFYVE9, variant not shown         Suspected internal deletion, this clone was ignored    
AI917512 pooled germ cell tumors Gene ZFYVE9, variant not shown         Suspected internal deletion, this clone was ignored    
BG287630 bladder, transitional cell papilloma, cell line Gene ZFYVE9, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI