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Gene ZFYTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
47 supporting clones for gene ZFY back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
L10393 testis .a 1 to 2691 1 to 2691 A333R tiling clone,   2691/2691
(100 %)
7 diff
(99.8 %id)
NM_003411.3   .b 1 to 5239 1 to 5239 exact RefSeq, AAA Possibly primed on the genome, locally A rich (38/38 A in genome downstream of last aligned base) 5239/5239
(100 %)
0 diff
(100 %id)
AI469059 Kidney .b 29 to 595 1 to 561   tiling clone, Submitted on the opposite strand 561/563
(99 %)
16 diff
(97.2 %id)
BC114960 PCR rescued clones .b 175 to 3880 1 to 3706 exact tiling clone,   3706/3706
(100 %)
0 diff
(100 %id)
AA995930 Kidney .b 295 to 522 1 to 229     Submitted on the opposite strand 229/229
(100 %)
22 diff
(90.4 %id)
BU569066 testis .b 321 to 1132 1 to 818       816/820
(99 %)
11 diff
(98.7 %id)
M30607   .b 322 to 2971 1 to 2650 H555Y     2650/2659
(99 %)
3 diff
(99.9 %id)
NM_001145275.1   .c 1 to 4997 1 to 4997 exact RefSeq, AAA Possibly primed on the genome, locally A rich (38/38 A in genome downstream of last aligned base) 4997/4997
(100 %)
0 diff
(100 %id)
BC114526 PCR rescued clones .c 175 to 3638 1 to 3464 exact tiling clone,   3464/3464
(100 %)
1 diff
(100.0 %id)
NM_001145276.1   .d 1 to 4748 2 to 4749 exact RefSeq, AAA Possibly primed on the genome, locally A rich (38/38 A in genome downstream of last aligned base) 4749/4749
(100 %)
0 diff
(100 %id)
DB446149 testis .d 96 to 771 1 to 675   tiling clone,   675/675
(100 %)
8 diff
(98.9 %id)
AK301061 Spleen .d 318 to 2590 1 to 2273 exact tiling clone,   2273/2273
(100 %)
0 diff
(100 %id)
DC389293 Spleen .d 318 to 908 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
EC569618 Prostate .d 472 to 561 1 to 88       88/88
(100 %)
2 diff
(97.8 %id)
TI_1971553209   .d 661 to 1157 23 to 521       499/521
(95 %)
44 diff
(91.6 %id)
CD652103 Embryonic Stem cells .e 1 to 797 47 to 837   tiling clone,   791/845
(93 %)
16 diff
(98.2 %id)
TI_1971557957   .e 429 to 1470 1 to 1048   tiling clone,   1048/1304
(80 %)
75 diff
(94.3 %id)
BG177200 lymph, lymphoma, cell line .e 492 to 1148 1 to 663   tiling clone,   663/664
(99 %)
9 diff
(98.7 %id)
AL119312 amygdala .e 989 to 1700 1 to 726   tiling clone,   726/729
(99 %)
57 diff
(92.2 %id)
DB511231 testis .e 1027 to 1699 1 to 675   tiling clone, Submitted on the opposite strand 675/677
(99 %)
7 diff
(99.0 %id)
CR746478 embryonal carcinoma, cell line, testis .e 1825 to 2317 12 to 504   tiling clone,   493/504
(97 %)
6 diff
(98.9 %id)
CR747169 bladder, transitional cell papilloma, cell line .e 1825 to 2305 12 to 492       481/492
(97 %)
6 diff
(98.8 %id)
BG260633 bladder, transitional cell papilloma, cell line .e 1826 to 2500 1 to 663   tiling clone,   663/919
(72 %)
18 diff
(98.1 %id)
BQ950184 sciatic nerve .e 2437 to 3315 1 to 883   tiling clone,   883/931
(94 %)
25 diff
(97.4 %id)
BU570528 testis .e 2577 to 3304 1 to 737   tiling clone,   737/830
(88 %)
19 diff
(97.8 %id)
AL137603 testis .e 3142 to 3963 1 to 822   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (38/38 A in genome downstream of last aligned base) 822/822
(100 %)
0 diff
(100 %id)
BF592062 Kidney .e 3429 to 3943 515 to 2       514/515
(99 %)
0 diff
(100 %id)
AW027926 Kidney .e 3449 to 3931 507 to 24   AAA   484/494
(97 %)
0 diff
(100 %id)
AW675065 cervix .e 3450 to 3695 1 to 245   fully sequenced,   245/245
(100 %)
0 diff
(100 %id)
AI261592 Kidney .e 3455 to 3941 487 to 1       487/487
(100 %)
0 diff
(100 %id)
AW778852 colon, moderately-differentiated adenocarcinoma .e 3455 to 3941 487 to 1       487/487
(100 %)
0 diff
(100 %id)
AA902815 pooled germ cell tumors .e 3464 to 3941 478 to 1       478/478
(100 %)
0 diff
(100 %id)
AI990722 pooled germ cell tumors .e 3498 to 3943 448 to 2       447/448
(99 %)
0 diff
(100 %id)
AI990718 pooled germ cell tumors .e 3508 to 3943 442 to 5       438/442
(99 %)
0 diff
(100 %id)
AA766898 germinal center B cell .e 3512 to 3941 443 to 14   AAA Possibly primed on the genome, locally A rich (38/38 A in genome downstream of last aligned base) 430/430
(100 %)
0 diff
(100 %id)
AL039661 testis .e 3630 to 3958 330 to 1       330/330
(100 %)
5 diff
(98.5 %id)
AW674333 cervix .e 3665 to 3944 279 to 1   fully sequenced,   279/279
(100 %)
2 diff
(99.3 %id)
AK310553 thymus .f 1 to 1842 2 to 1843 exact tiling clone,   1843/1843
(100 %)
0 diff
(100 %id)
DB104479 thymus .f 1 to 560 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
CB990394 Human Placenta, placenta .f 210 to 815 28 to 633       606/686
(88 %)
8 diff
(98.9 %id)
BP364622 lung .f 310 to 892 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BI600096 brain, hypothalamus .g 1 to 685 1 to 684 I83T E84* tiling clone,   684/700
(97 %)
11 diff
(98.5 %id)
TI_45215997   .g 6 to 685 88 to 766 I83T E84*     679/927
(73 %)
14 diff
(98.5 %id)
AI831955 B-cell, chronic lymphotic leukemia .h-u 1 to 525 526 to 1 G23V R85P R86A R87P P88T ... tiling clone,   526/526
(100 %)
3 diff
(99.5 %id)
AI523646 B-cell, chronic lymphotic leukemia .h-u 69 to 547 479 to 1   tiling clone,   479/479
(100 %)
0 diff
(100 %id)
BE675633 B-cell, chronic lymphotic leukemia .h-u 69 to 463 396 to 1       396/396
(100 %)
2 diff
(99.5 %id)
AA910927 Kidney .h-u 84 to 463 376 to 1       376/376
(100 %)
6 diff
(98.5 %id)
CR743290 pooled germ cell tumors Gene ZFY, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC