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Gene ZFP28TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
83 supporting clones for gene ZFP28 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB959490 Human Placenta, placenta .a 1 to 615 28 to 646   tiling clone,   619/770
(80 %)
11 diff
(98.6 %id)
DR001530 fetal brain .a 1 to 617 1 to 616       616/616
(100 %)
7 diff
(98.9 %id)
BI554013 brain, hippocampus .a 19 to 598 52 to 625       574/625
(91 %)
12 diff
(98.1 %id)
TI_44167385   .a 19 to 598 52 to 625       574/625
(91 %)
12 diff
(98.1 %id)
AB037852 brain .a 24 to 4099 1 to 4076 F383S available from KIAA,   4076/4076
(100 %)
2 diff
(100.0 %id)
AF507045   .a 24 to 4109 1 to 4086 exact tiling clone, AAA   4086/4086
(100 %)
0 diff
(100 %id)
BG720503 testis .a 24 to 782 1 to 766   available from MGC,   766/848
(90 %)
27 diff
(96.9 %id)
NM_020828.1   .a 24 to 4109 1 to 4086 exact RefSeq, AAA   4086/4086
(100 %)
0 diff
(100 %id)
DB476071 hippocampus .a 29 to 708 1 to 673       673/673
(100 %)
19 diff
(97.2 %id)
BC127002 PCR rescued clones .a 39 to 2765 1 to 2727 A40V A43G     2727/2727
(100 %)
2 diff
(100.0 %id)
BC127003 PCR rescued clones .a 39 to 2765 1 to 2727 exact     2727/2727
(100 %)
0 diff
(100 %id)
DA126569 cerebellum .a 40 to 610 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BU169403 eye, retinoblastoma .a 62 to 616 1 to 556       556/887
(62 %)
19 diff
(97.9 %id)
DA697792   .a 93 to 660 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
CV029776 mixed .a 95 to 546 1 to 452       452/452
(100 %)
5 diff
(98.9 %id)
DA097136 cerebellum .a 116 to 665 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA533297 brain .a 207 to 768 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA557740   .a 207 to 749 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
AL713426 human skeletal muscle .a 215 to 692 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
DA185622 amygdala .a 236 to 790 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BP289302 lung .a 470 to 1052 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
BG574473 breast, mammary adenocarcinoma, cell line .a 742 to 1605 1 to 878       878/878
(100 %)
17 diff
(98.1 %id)
CR749659 fetal brain .a 990 to 4114 245 to 3369   available from DKFZ, AAA   3125/3369
(92 %)
6 diff
(99.9 %id)
BX491432   .a 991 to 1281 249 to 539       291/539
(53 %)
6 diff
(98.9 %id)
AL042491 testis .a 1174 to 1839 1 to 668       668/669
(99 %)
3 diff
(99.6 %id)
EC487441 Prostate .a 1310 to 1413 108 to 6       103/108
(95 %)
0 diff
(100 %id)
DA116309 cerebellum .a 1312 to 1878 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
EC474207 Prostate .a 1313 to 1415 113 to 10       104/114
(91 %)
0 diff
(100 %id)
H65586 liver and spleen .a 1428 to 1738 1 to 314       314/316
(99 %)
4 diff
(98.8 %id)
BG827307 muscle, rhabdomyosarcoma .a 1463 to 2035 1 to 573       573/578
(99 %)
3 diff
(99.5 %id)
DA108143 cerebellum .a 1663 to 2240 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
AA385073 thyroid gland .a 1685 to 2066 1 to 382       382/383
(99 %)
3 diff
(99.3 %id)
AW966605   .a 1686 to 2251 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
BG430796 Kidney .a 1946 to 2700 1 to 758       758/758
(100 %)
6 diff
(99.3 %id)
BG030458 breast, mammary adenocarcinoma, cell line .a 2350 to 3071 1 to 716       716/949
(75 %)
9 diff
(99.1 %id)
F08528 brain, total brain .a 2458 to 2666 1 to 209       209/209
(100 %)
5 diff
(97.7 %id)
BF358879 lung_tumor .a 2573 to 2789 220 to 5       216/220
(98 %)
0 diff
(100 %id)
BM754007 stomach .a 2645 to 3090 1 to 446       446/446
(100 %)
0 diff
(100 %id)
BU618569 Cell Line, Chondrosarcoma .a 2684 to 3184 519 to 19   AAA   501/501
(100 %)
0 diff
(100 %id)
BQ022635 placenta .a 2759 to 3179 439 to 19   AAA   421/421
(100 %)
0 diff
(100 %id)
BM698777 eye, fetal eyes .a 2975 to 3406 1 to 432       432/432
(100 %)
0 diff
(100 %id)
AA633931 lung .a 2983 to 3177 195 to 1       195/195
(100 %)
0 diff
(100 %id)
BE503014 carcinoid, lung .a 3125 to 3599 475 to 1       475/475
(100 %)
0 diff
(100 %id)
TI_154127518   .a 3214 to 4118 987 to 101   AAA   887/976
(90 %)
20 diff
(98.0 %id)
BX102556 liver and spleen .a 3340 to 4101 1 to 762   AAA   762/762
(100 %)
2 diff
(99.8 %id)
T80906 liver and spleen .a 3340 to 3641 1 to 305       305/354
(86 %)
12 diff
(96.7 %id)
BQ006498 Chondrosarcoma, Left Pelvis .a 3374 to 4109 754 to 19   AAA   736/736
(100 %)
2 diff
(99.8 %id)
CA417190 Chondrosarcoma Cell line .a 3383 to 4118 749 to 15   AAA   735/735
(100 %)
4 diff
(99.5 %id)
TI_154068178   .a 3456 to 4101 728 to 85   AAA   644/649
(99 %)
77 diff
(88.2 %id)
BQ019638 Chondrosarcoma, Left Pubic Bone .a 3504 to 4092 606 to 19   AAA   588/588
(100 %)
1 diff
(99.9 %id)
AW978667   .a 3557 to 4100 543 to 1     Submitted on the opposite strand 543/545
(99 %)
24 diff
(95.6 %id)
AA676900 liver and spleen .a 3666 to 4094 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AA831323 germinal center B cell .a 3681 to 4101 433 to 13   AAA   421/421
(100 %)
0 diff
(100 %id)
AI057431 liver and spleen .a 3698 to 4101 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI080984 liver and spleen .a 3728 to 4101 374 to 1       374/374
(100 %)
1 diff
(99.8 %id)
T80833 liver and spleen .a 3771 to 4096 336 to 1       336/398
(84 %)
18 diff
(95.5 %id)
BQ716029 sympathetic trunk .a 4020 to 4715 1 to 703   tiling clone,   703/932
(75 %)
27 diff
(97.2 %id)
AA130647   .a 4240 to 4698 1 to 460     Submitted on the opposite strand 460/460
(100 %)
1 diff
(99.8 %id)
AA146742 colon, tumor .a 4541 to 4962 1 to 423     Submitted on the opposite strand 423/424
(99 %)
6 diff
(98.6 %id)
DB358121 whole embryo, mainly head .a 4544 to 5124 1 to 580   tiling clone, Submitted on the opposite strand 580/587
(98 %)
21 diff
(96.5 %id)
BX095153   .a 4710 to 5437 1 to 729   AAA   729/729
(100 %)
3 diff
(99.6 %id)
AA399391   .a 4710 to 5163 1 to 454   fully sequenced,   454/454
(100 %)
2 diff
(99.6 %id)
AI828337 adenocarcinoma, Pancreas .a 4970 to 5338 370 to 1       370/370
(100 %)
4 diff
(99.0 %id)
AI093747 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4986 to 5435 450 to 1   tiling clone,   450/450
(100 %)
0 diff
(100 %id)
AA398016   .a 5133 to 5440 308 to 1   tiling clone, fully sequenced,   308/308
(100 %)
1 diff
(99.7 %id)
BC028416 testis .b 1 to 3487 1 to 3487 R10H S324F tiling clone, available from MGC, AAA   3487/3487
(100 %)
5 diff
(99.9 %id)
BC099903 Brain, hippocampus .b 1 to 3487 1 to 3487 R10H S324F AAA   3487/3487
(100 %)
5 diff
(99.9 %id)
AK289583 cerebellum .b 11 to 1229 1 to 1219 S141W tiling clone,   1219/1219
(100 %)
1 diff
(100.0 %id)
TI_1948091890   .b 63 to 1118 130 to 1190 R10H L237P A238G V239C D240* fully sequenced,   1061/1190
(89 %)
41 diff
(96.6 %id)
TI_1948092040   .b 63 to 1122 132 to 1190 R10H N251I F252S C253V K254R ... fully sequenced,   1059/1190
(88 %)
42 diff
(96.5 %id)
TI_1948092192   .b 63 to 620 135 to 692   fully sequenced,   558/692
(80 %)
6 diff
(99.2 %id)
TI_1948092341   .b 63 to 620 133 to 690   fully sequenced,   558/690
(80 %)
6 diff
(99.2 %id)
TI_1948091891   .b 559 to 1115 679 to 123   fully sequenced,   557/679
(82 %)
0 diff
(100 %id)
TI_1948092041   .b 559 to 1115 680 to 124   fully sequenced,   557/680
(81 %)
0 diff
(100 %id)
TI_1948092193   .b 559 to 1115 677 to 121   fully sequenced,   557/677
(82 %)
0 diff
(100 %id)
TI_1948092342   .b 559 to 1115 680 to 124   fully sequenced,   557/680
(81 %)
0 diff
(100 %id)
BF059299 pooled germ cell tumors .b 868 to 1383 516 to 1   tiling clone,   516/516
(100 %)
0 diff
(100 %id)
AW594181 pooled germ cell tumors .b 880 to 1374 494 to 1       494/494
(100 %)
3 diff
(99.4 %id)
AW291672   .b 935 to 1383 466 to 18   AAA   449/449
(100 %)
1 diff
(99.8 %id)
DB636740 hippocampus .b 2820 to 3493 1 to 673     Submitted on the opposite strand 673/673
(100 %)
7 diff
(99.0 %id)
DA685063   .c-u 1 to 541 2 to 542   tiling clone, capped   541/541
(100 %)
1 diff
(99.9 %id)
DB074233 testis .c-u 76 to 622 2 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
AI334167 lung .d 1 to 452 452 to 1 P4X tiling clone,   452/452
(100 %)
0 diff
(100 %id)
AI243251 pooled .d 10 to 452 444 to 1       444/448
(99 %)
1 diff
(99.8 %id)
AW440002 2 pooled tumors (clear cell type), Kidney .d 141 to 538 399 to 1   tiling clone,   399/399
(100 %)
2 diff
(99.5 %id)
DA662620   .e 1 to 532 2 to 533 exact tiling clone, capped   532/532
(100 %)
0 diff
(100 %id)
DB087018 testis .f 1 to 575 2 to 576 exact tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
AW590434 pooled germ cell tumors .g-u 1 to 570 570 to 1 exact tiling clone,   570/570
(100 %)
0 diff
(100 %id)
AF226995 atrial muscle Gene ZFP28, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e, .f, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C