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Gene ZNF628TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
45 supporting clones for gene ZNF628 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC089449 Chondrosarcoma Lung Metastasis .a 1 to 3843 1 to 3843 T234A V439A tiling clone, AAA   3843/3843
(100 %)
5 diff
(99.9 %id)
CF125227 Chondrosarcoma Lung Metastasis cell lines, lung .a 1 to 615 1 to 614       614/614
(100 %)
1 diff
(99.9 %id)
NM_033113.2   .a 1 to 3847 1 to 3847 exact RefSeq, AAA   3847/3847
(100 %)
0 diff
(100 %id)
TI_154186749   .a 1 to 860 49 to 901       853/1012
(84 %)
30 diff
(97.1 %id)
CR995992 T-Lymphocytes .a 556 to 1248 1 to 693       693/695
(99 %)
2 diff
(99.8 %id)
BF724583 eye, Iris .a 1891 to 2282 1 to 392       392/392
(100 %)
1 diff
(99.8 %id)
BY798301 eye .a 2115 to 2580 1 to 466       466/466
(100 %)
0 diff
(100 %id)
BI761477 pooled colon, kidney, stomach .a 2203 to 2877 1 to 687       687/800
(85 %)
62 diff
(92.3 %id)
TI_57149272   .a 2203 to 2751 30 to 580   AAA   551/814
(67 %)
4 diff
(99.6 %id)
CR746998 pooled colon, kidney, stomach .a 2208 to 2686 1 to 479   tiling clone,   479/479
(100 %)
0 diff
(100 %id)
BU944663 adenocarcinoma, cell line, breast .a 2452 to 3335 1 to 891       891/913
(97 %)
19 diff
(98.0 %id)
BU166694 melanotic melanoma, cell line, skin .a 2646 to 3249 1 to 605       605/981
(61 %)
10 diff
(99.0 %id)
BU179823 melanotic melanoma, cell line, skin .a 2646 to 3199 1 to 558       558/979
(56 %)
14 diff
(98.6 %id)
BC016036 Skin, melanotic melanoma. .a 2693 to 3847 1 to 1155   available from MGC, AAA   1155/1155
(100 %)
1 diff
(100.0 %id)
BE891963 melanotic melanoma, skin .a 2702 to 3142 1 to 439   available from MGC,   439/439
(100 %)
2 diff
(99.6 %id)
BX284088 skin, squamous cell carcinoma .a 2713 to 3134 1 to 427       427/436
(97 %)
2 diff
(99.6 %id)
BG681196 skin, squamous cell carcinoma .a 2726 to 3635 1 to 909       909/909
(100 %)
24 diff
(97.4 %id)
CF552749 Pooled muscle (cardiac and skeletal) .a 2791 to 3632 1 to 847   tiling clone,   847/849
(99 %)
6 diff
(99.3 %id)
BM916735 amelanotic melanoma, cell line, skin .a 2833 to 3370 564 to 27     Submitted on the opposite strand 538/1242
(43 %)
0 diff
(100 %id)
BC047332 Liver, adenocarcinoma .a 2843 to 3847 1 to 1005   available from MGC, AAA   1005/1005
(100 %)
1 diff
(100.0 %id)
BG121626 adenocarcinoma, cell line, Liver .a 2844 to 3408 1 to 564   available from MGC,   564/811
(69 %)
12 diff
(98.6 %id)
BQ877992 ductal carcinoma, cell line, Pancreas .a 2854 to 3637 30 to 821       792/955
(82 %)
15 diff
(98.5 %id)
BU196853 ductal carcinoma, cell line, Pancreas .a 2856 to 3617 1 to 770       770/958
(80 %)
22 diff
(97.8 %id)
BQ686745 ductal carcinoma, cell line, Pancreas .a 2856 to 3637 1 to 787       787/973
(80 %)
16 diff
(98.4 %id)
BI116739 lung, small cell carcinoma .a 2870 to 3842 1 to 970       970/991
(97 %)
72 diff
(92.8 %id)
BQ897017 melanotic melanoma, cell line, skin .a 2874 to 3351 1 to 482       482/847
(56 %)
16 diff
(98.2 %id)
BU190227 melanotic melanoma, cell line, skin .a 2874 to 3686 1 to 826       826/946
(87 %)
22 diff
(97.7 %id)
BU183527 melanotic melanoma, cell line, skin .a 2874 to 3689 1 to 822       822/915
(89 %)
9 diff
(99.1 %id)
BU163321 melanotic melanoma, cell line, skin .a 2874 to 3623 1 to 755       755/964
(78 %)
26 diff
(97.4 %id)
BE207234 lung, small cell carcinoma .a 2894 to 3308 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
BE266530 lung, small cell carcinoma .a 2913 to 3477 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
AF367249 Liver .a 2939 to 3569 1 to 635       635/636
(99 %)
11 diff
(98.3 %id)
BG913938 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2977 to 3162 1 to 185       185/185
(100 %)
2 diff
(99.0 %id)
BQ215062 melanotic melanoma, skin .a 2987 to 3731 9 to 759       751/902
(83 %)
22 diff
(97.6 %id)
EC561911 Prostate .a 2993 to 3093 1 to 101       101/101
(100 %)
0 diff
(100 %id)
AA062848 heart .a 3350 to 3810 1 to 456       456/458
(99 %)
21 diff
(95.5 %id)
AI912315 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3379 to 3847 469 to 1       469/469
(100 %)
0 diff
(100 %id)
AW615682 lung, small cell carcinoma .a 3564 to 3847 294 to 11       284/294
(96 %)
0 diff
(100 %id)
AA827434 Kidney, kidney tumor .a 3602 to 3841 239 to 1       239/248
(96 %)
1 diff
(99.6 %id)
D60044   .a 3645 to 3847 1 to 203       203/203
(100 %)
5 diff
(97.6 %id)
D60343   .a 3645 to 3847 1 to 203       203/203
(100 %)
4 diff
(98.1 %id)
D60780   .a 3645 to 3847 1 to 201       201/201
(100 %)
1 diff
(99.6 %id)
AI597633 anaplastic oligodendroglioma, brain .a 3646 to 3843 226 to 29   AAA   198/199
(99 %)
2 diff
(99.0 %id)
AA035617 heart .a 3704 to 3843 140 to 2       139/140
(99 %)
0 diff
(100 %id)
CN268072 embryonic stem cells, cell lines H1, H7, andH9 .b 1 to 472 1 to 472 exact tiling clone,   472/472
(100 %)
0 diff
(100 %id)
BG290052 bladder, transitional cell papilloma, cell line Gene ZNF628, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C