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Gene ZDHHC22TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
58 supporting clones for gene ZDHHC22 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_174976.2   .a 1 to 3407 2 to 3408 exact RefSeq,   3408/3408
(100 %)
0 diff
(100 %id)
AK294840 brain .a 1 to 1368 1 to 1368 exact tiling clone,   1368/1368
(100 %)
2 diff
(99.9 %id)
DC322039 brain .a 1 to 563 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DA496626 brain .a 1 to 579 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DC352994 brain .a 1 to 341 1 to 341       341/341
(100 %)
3 diff
(99.2 %id)
DR000654 fetal brain .a 24 to 613 13 to 601       589/601
(98 %)
6 diff
(99.1 %id)
AW005908 anaplastic oligodendroglioma, brain .a 64 to 298 235 to 1       235/235
(100 %)
1 diff
(99.6 %id)
DR003113 fetal brain .a 142 to 611 121 to 592       472/592
(79 %)
8 diff
(98.7 %id)
BC117676 PCR rescued clones .a 175 to 2459 1 to 2307 exact tiling clone,   2307/2307
(100 %)
10 diff
(99.6 %id)
DC317912 amygdala .a 281 to 868 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
BG912213 anaplastic oligodendroglioma with 1p/19qloss, brain .a 632 to 1376 1 to 762   available from MGC,   739/778
(94 %)
51 diff
(93.5 %id)
BM171640 anaplastic oligodendroglioma with 1p/19qloss, brain .a 632 to 1328 1 to 698   available from MGC,   698/698
(100 %)
9 diff
(98.8 %id)
BC035881 Brain, anaplastic oligodendroglioma with1p/19q loss .a 640 to 3406 20 to 2796   tiling clone, available from MGC, AAA   2777/2788
(99 %)
14 diff
(99.5 %id)
BI823673 pooled brain, lung, testis .a 728 to 1370 685 to 31     Submitted on the opposite strand 655/693
(94 %)
0 diff
(100 %id)
TI_57200779   .a 728 to 1370 759 to 105     Submitted on the opposite strand 655/767
(85 %)
0 diff
(100 %id)
DC341096 thalamus .a 755 to 1327 1 to 573       573/573
(100 %)
0 diff
(100 %id)
CB155793 brain .a 763 to 1365 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
BI824432 pooled brain, lung, testis .a 866 to 1370 540 to 31     Submitted on the opposite strand 510/540
(94 %)
0 diff
(100 %id)
TI_57200861   .a 866 to 1370 562 to 53     Submitted on the opposite strand 510/562
(90 %)
0 diff
(100 %id)
DA173413 amygdala .a 1101 to 1676 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
BE258387 eye, retinoblastoma .a 1278 to 1923 1 to 666       666/706
(94 %)
16 diff
(97.8 %id)
BU193017 eye, retinoblastoma .a 1598 to 2409 1 to 842       842/874
(96 %)
26 diff
(97.1 %id)
CF264712 Brain glioblastoma .a 1743 to 2595 1 to 884       884/893
(98 %)
13 diff
(98.6 %id)
CN281283 embryonic stem cells, cell lines H1, H7, andH9 .a 1763 to 2086 9 to 342       334/342
(97 %)
6 diff
(98.3 %id)
BG818110 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1878 to 2661 11 to 797   tiling clone,   787/838
(93 %)
11 diff
(98.7 %id)
BE267333 lung, small cell carcinoma .a 1925 to 2597 1 to 666       666/704
(94 %)
11 diff
(98.5 %id)
BF346302 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1930 to 2700 1 to 774   tiling clone,   774/1059
(73 %)
20 diff
(98.2 %id)
BE266695 lung, small cell carcinoma .a 1934 to 2456 1 to 527       527/529
(99 %)
14 diff
(97.4 %id)
BE265474 lung, small cell carcinoma .a 1934 to 2567 1 to 624   tiling clone,   624/707
(88 %)
15 diff
(97.9 %id)
BG819258 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2104 to 2750 1 to 651       651/654
(99 %)
10 diff
(98.5 %id)
BE778331 eye, retinoblastoma .a 2155 to 2900 1 to 747       747/751
(99 %)
19 diff
(97.5 %id)
BQ440170 eye, retinoblastoma .a 2194 to 2910 1 to 732       732/766
(95 %)
24 diff
(96.9 %id)
N53200 multiple sclerosis lesions .a 2277 to 2428 1 to 152       152/152
(100 %)
4 diff
(97.4 %id)
BM713119 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2396 to 2974 1 to 579   tiling clone,   579/579
(100 %)
1 diff
(99.9 %id)
BM716493 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2396 to 2606 1 to 211       211/211
(100 %)
3 diff
(98.6 %id)
AA011099 heart .a 2432 to 2752 1 to 321       321/416
(77 %)
2 diff
(99.6 %id)
BF945160 nervous_normal .a 2679 to 3072 393 to 2     Submitted on the opposite strand 392/393
(99 %)
0 diff
(100 %id)
BG818087 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2799 to 3399 1 to 597   AAA   597/597
(100 %)
7 diff
(98.9 %id)
BU738548 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2816 to 3399 602 to 19   AAA   584/584
(100 %)
0 diff
(100 %id)
AW450401   .a 2828 to 3136 1 to 309     Submitted on the opposite strand 309/309
(100 %)
4 diff
(98.8 %id)
DB302662 amygdala .a 2835 to 3406 572 to 1       572/572
(100 %)
2 diff
(99.7 %id)
BM725985 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2842 to 3399 1 to 558   AAA   558/558
(100 %)
0 diff
(100 %id)
DB315663 brain .a 2875 to 3399 525 to 1       525/525
(100 %)
1 diff
(99.9 %id)
BG818857 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2916 to 3405 1 to 489       489/943
(51 %)
2 diff
(99.8 %id)
AI363193 anaplastic oligodendroglioma, brain .a 2941 to 3402 462 to 1       462/462
(100 %)
0 diff
(100 %id)
BE222693 brain, oligodendroglioma .a 2946 to 3406 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AI094961 brain, glioblastoma (pooled) .a 2958 to 3407 451 to 2   tiling clone,   450/451
(99 %)
0 diff
(100 %id)
AI085337 anaplastic oligodendroglioma, brain .a 2993 to 3402 412 to 3       410/412
(99 %)
0 diff
(100 %id)
AA778997   .a 3000 to 3399 400 to 1       400/400
(100 %)
0 diff
(100 %id)
AI272285 brain, oligodendroglioma .a 3024 to 3407 385 to 2       384/385
(99 %)
0 diff
(100 %id)
N51537 multiple sclerosis lesions .a 3030 to 3399 379 to 1       379/429
(88 %)
11 diff
(97.5 %id)
AW246803 lung, small cell carcinoma .a 3042 to 3399 368 to 11   AAA   358/358
(100 %)
4 diff
(98.9 %id)
AI197900 anaplastic oligodendroglioma, brain .a 3059 to 3400 342 to 1       342/342
(100 %)
5 diff
(98.6 %id)
BG222817 brain, glioblastoma without EGFR amplification .a 3066 to 3402 337 to 1       337/337
(100 %)
0 diff
(100 %id)
BG057078 anaplastic oligodendroglioma, brain .a 3110 to 3407 300 to 3       298/300
(99 %)
0 diff
(100 %id)
AA011100 heart .a 3127 to 3399 273 to 1       273/273
(100 %)
0 diff
(100 %id)
DC344027 thalamus .b 1 to 545 1 to 545 exact tiling clone,   545/545
(100 %)
0 diff
(100 %id)
AA412615   .c 1 to 341 1 to 341 exact tiling clone,   341/341
(100 %)
1 diff
(99.8 %id)
AK095612 brain Gene ZDHHC22, variant not shown       available from FLJ, Suspected internal deletion, suspected internal deletion, this clone was ignored    
DA364695 subthalamic nucleus Gene ZDHHC22, variant not shown       capped Suspected internal deletion, suspected internal deletion, this clone was ignored    
AI086469 anaplastic oligodendroglioma, brain Gene ZDHHC22, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI417394 anaplastic oligodendroglioma, brain Gene ZDHHC22, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C