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Gene ZDHHC11TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
93 supporting clones for gene ZDHHC11 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN296750 embryonic stem cells, cell lines H1, H7, andH9 ZDHHC11.a 1 to 656 1 to 656   tiling clone,   656/656
(100 %)
1 diff
(99.9 %id)
AK023215   ZDHHC11.a 103 to 2706 1 to 2623   tiling clone, available from FLJ,   2623/2623
(100 %)
27 diff
(99.0 %id)
NM_024786.2   ZDHHC11.a 103 to 2707 1 to 2605   RefSeq, AAA   2605/2605
(100 %)
0 diff
(100 %id)
AU131881   ZDHHC11.a 104 to 988 2 to 894   capped   893/893
(100 %)
14 diff
(98.5 %id)
DA332158 hippocampus ZDHHC11.a 450 to 1033 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA202319 brain ZDHHC11.a 479 to 1040 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BC032000 Skin, squamous cell carcinoma ZDHHC11.a 484 to 2707 1 to 2243   available from MGC, AAA   2243/2243
(100 %)
29 diff
(98.8 %id)
BG677648 skin, squamous cell carcinoma ZDHHC11.a 484 to 1191 1 to 707       707/707
(100 %)
7 diff
(99.1 %id)
CV029314 mixed ZDHHC11.a 487 to 1080 1 to 594       594/594
(100 %)
0 diff
(100 %id)
TI_1948126699   ZDHHC11.a 487 to 991 146 to 652       507/1315
(38 %)
13 diff
(99.1 %id)
TI_1948127338   ZDHHC11.a 487 to 1113 133 to 766       634/1363
(46 %)
24 diff
(98.3 %id)
DA998851 breast, tumor tissue ZDHHC11.a 761 to 1344 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
TI_1948126700   ZDHHC11.a 1010 to 1724 786 to 64       723/1220
(59 %)
13 diff
(99.0 %id)
TI_1948127021   ZDHHC11.a 1064 to 1724 774 to 112       663/1061
(62 %)
20 diff
(98.2 %id)
TI_1948127020   ZDHHC11.a 1113 to 1724 679 to 64       616/1188
(51 %)
7 diff
(99.5 %id)
TI_1948127643   ZDHHC11.a 1113 to 1724 738 to 121       618/1047
(59 %)
38 diff
(96.4 %id)
TI_1948127642   ZDHHC11.a 1123 to 1724 694 to 93       602/1268
(47 %)
5 diff
(99.7 %id)
BF868742 lung_tumor ZDHHC11.a 1543 to 1944 6 to 409       404/409
(98 %)
11 diff
(97.4 %id)
CK023929 brain/CNS, Human Brain - Cerebellar Cortex ZDHHC11.a 1674 to 2373 1 to 694       694/695
(99 %)
12 diff
(98.3 %id)
AA421803 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus ZDHHC11.a 1687 to 2170 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BQ338399.
matches multiple genes
nervous_normal ZDHHC11.a 1704 to 1842 16 to 158     also hits gene kameme 143/164
(87 %)
7 diff
(95.8 %id)
AV661671.
matches multiple genes
corresponding non cancerous liver tissue ZDHHC11.a 1723 to 2116 1 to 396     Submitted on the opposite strand, also hits gene kameme 396/396
(100 %)
31 diff
(92.2 %id)
Z45731.
matches multiple genes
brain, total brain ZDHHC11.a 1735 to 1926 1 to 192     also hits gene kameme 192/200
(96 %)
4 diff
(98.0 %id)
R60506.
matches multiple genes
whole brain ZDHHC11.a 1735 to 2104 1 to 379     also hits gene kameme 379/386
(98 %)
13 diff
(96.7 %id)
R20049.
matches multiple genes
whole brain ZDHHC11.a 1736 to 2132 1 to 405     also hits gene kameme 405/408
(99 %)
16 diff
(96.1 %id)
BQ331652.
matches multiple genes
lung_tumor ZDHHC11.a 1755 to 2130 23 to 395     also hits gene kameme 373/395
(94 %)
6 diff
(98.5 %id)
BM894483 insulinoma, Pancreas ZDHHC11.a 1860 to 2273 1 to 414   fully sequenced,   414/414
(100 %)
5 diff
(98.8 %id)
CN296751 embryonic stem cells, DMSO-treated H9 cellline ZDHHC11.a 2115 to 2639 71 to 593   tiling clone,   523/593
(88 %)
6 diff
(99.0 %id)
DB311936 thalamus ZDHHC11.a 2154 to 2707 552 to 1       552/552
(100 %)
26 diff
(95.3 %id)
AU153546   ZDHHC11.a 2203 to 2706 497 to 1       497/555
(89 %)
28 diff
(95.0 %id)
AA767372 germinal center B cell ZDHHC11.a 2226 to 2706 493 to 15   AAA   479/479
(100 %)
13 diff
(97.3 %id)
BM894210 insulinoma, Pancreas ZDHHC11.a 2243 to 2705 463 to 1   fully sequenced,   463/463
(100 %)
25 diff
(94.7 %id)
DB317760 brain ZDHHC11.a 2251 to 2706 454 to 1       454/454
(100 %)
13 diff
(97.2 %id)
AI248375 liver and spleen ZDHHC11.a 2327 to 2706 380 to 1       380/381
(99 %)
19 diff
(95.1 %id)
AA723382 heart ZDHHC11.a 2334 to 2708 373 to 1   tiling clone,   373/375
(99 %)
1 diff
(99.8 %id)
BQ353127 head_neck ZDHHC11.a 2339 to 2466 1 to 132       132/140
(94 %)
9 diff
(93.6 %id)
AA768200 germinal center B cell ZDHHC11.a 2350 to 2706 369 to 15   AAA   355/355
(100 %)
1 diff
(99.8 %id)
AI379904 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus ZDHHC11.a 2351 to 2706 356 to 3       354/356
(99 %)
0 diff
(100 %id)
AW977124   ZDHHC11.a 2379 to 2705 328 to 3     Submitted on the opposite strand 326/333
(97 %)
0 diff
(100 %id)
AI338678 lung ZDHHC11.a 2446 to 2706 264 to 4       261/264
(98 %)
0 diff
(100 %id)
BU428513 lymph ZDHHC11.b 1 to 367 1 to 367   tiling clone,   367/367
(100 %)
5 diff
(98.7 %id)
TI_154149295   ZDHHC11.b 8 to 551 79 to 620       542/824
(65 %)
27 diff
(96.8 %id)
AU127911   ZDHHC11.b 282 to 897 2 to 619   tiling clone, to resequence, capped   618/618
(100 %)
12 diff
(98.1 %id)
DB228608 trachea ZDHHC11.b 579 to 1143 2 to 566   tiling clone, capped   565/565
(100 %)
2 diff
(99.7 %id)
AU150300   ZDHHC11.b 1818 to 2322 507 to 1   tiling clone, to resequence,   507/571
(88 %)
39 diff
(93.2 %id)
DB022802 testis ZDHHC11.c 1 to 549 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB064018 testis ZDHHC11.c 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DB061028 testis ZDHHC11.c 3 to 546 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
AL514006 placenta ZDHHC11.c 517 to 1541 1 to 1019       1019/1059
(96 %)
11 diff
(99.0 %id)
CR605165 placenta ZDHHC11.c 517 to 2306 1 to 1790   tiling clone,   1790/1790
(100 %)
0 diff
(100 %id)
DB181348 liver, tumor tissue ZDHHC11.c 1239 to 1798 2 to 561   capped   560/560
(100 %)
7 diff
(98.8 %id)
BX451828 placenta ZDHHC11.c 1383 to 2306 1 to 920       920/920
(100 %)
16 diff
(98.3 %id)
BX432953 placenta ZDHHC11.c 1392 to 2283 889 to 1       889/889
(100 %)
12 diff
(98.7 %id)
BM547689 brain, hippocampus ZDHHC11.c 1425 to 2484 11 to 1078   tiling clone,   1068/1093
(97 %)
40 diff
(96.4 %id)
BM547748 brain, hippocampus ZDHHC11.c 1442 to 2457 8 to 1038   tiling clone,   1031/1075
(95 %)
27 diff
(97.5 %id)
BX432954 placenta ZDHHC11.c 1493 to 2282 790 to 1       790/819
(96 %)
12 diff
(98.6 %id)
BE770199 prostate_tumor ZDHHC11.d-u 1 to 415 9 to 423   tiling clone,   415/431
(96 %)
5 diff
(98.9 %id)
BX953714   ZDHHC11.d-u 5 to 726 1 to 721   tiling clone,   721/721
(100 %)
4 diff
(99.5 %id)
BU535704 adenocarcinoma, cell line, breast ZDHHC11.d-u 346 to 1027 1 to 686   tiling clone,   686/842
(81 %)
5 diff
(99.5 %id)
BU538011 adenocarcinoma, cell line, breast ZDHHC11.d-u 346 to 1248 1 to 904   tiling clone, AAA   904/904
(100 %)
27 diff
(97.1 %id)
DA092703 cerebellum ZDHHC11.e 1 to 494 2 to 495 exact tiling clone, capped   494/494
(100 %)
0 diff
(100 %id)
DB098057 testis ZDHHC11.f 1 to 586 2 to 587   tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
CR745213 pooled germ cell tumors ZDHHC11.f 14 to 489 1 to 476       476/476
(100 %)
0 diff
(100 %id)
CU452476 epidermis ZDHHC11.f 485 to 973 496 to 8   tiling clone, Submitted on the opposite strand 489/516
(94 %)
13 diff
(97.5 %id)
BX116213 lung ZDHHC11.g 1 to 388 1 to 389 G18T L19P S20F S21L A22G ... tiling clone,   389/389
(100 %)
3 diff
(99.3 %id)
AI221377 pooled ZDHHC11.h 1 to 387 1 to 387 exact tiling clone, Submitted on the opposite strand 387/387
(100 %)
0 diff
(100 %id)
AW170290 cervix, tumor ZDHHC11.h 1 to 393 1 to 393 M4V G60R S64G S65I A66S ... tiling clone, Submitted on the opposite strand 393/393
(100 %)
15 diff
(96.2 %id)
AY358673   ZDHHC11.i 1 to 1301 1 to 1301 exact tiling clone, AAA   1301/1301
(100 %)
1 diff
(100.0 %id)
CN360751 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 ZDHHC11.i 102 to 342 1 to 241       241/241
(100 %)
0 diff
(100 %id)
BE042819 colon, moderately-differentiated adenocarcinoma ZDHHC11.i 684 to 1296 630 to 17   tiling clone, AAA   614/618
(99 %)
33 diff
(94.7 %id)
DB339339.
matches multiple genes
testis ZDHHC11.i 761 to 1301 541 to 1   tiling clone, also hits gene rahame 541/541
(100 %)
9 diff
(98.4 %id)
N78741.
matches multiple genes
lung ZDHHC11.i 858 to 1301 442 to 1     also hits gene MST4 442/442
(100 %)
2 diff
(99.6 %id)
CK000304 mixed ZDHHC11.j 1 to 724 8 to 728 P77H Y78T V79C Q80K M81W ... tiling clone,   721/799
(90 %)
14 diff
(98.3 %id)
DA094494 cerebellum ZDHHC11.j 148 to 708 2 to 562   tiling clone, capped   561/562
(99 %)
4 diff
(99.3 %id)
CN360752 embryonic stem cells, cell lines H1, H7, andH9 ZDHHC11.k 1 to 489 1 to 489 exact tiling clone,   489/489
(100 %)
0 diff
(100 %id)
BX492248   ZDHHC11.k 287 to 540 1 to 254   tiling clone,   254/254
(100 %)
1 diff
(99.7 %id)
W16671 lung ZDHHC11.l 1 to 482 7 to 473 E53X L54W V55W V56S L57C ... tiling clone,   467/523
(89 %)
17 diff
(96.8 %id)
TI_154137047   ZDHHC11.m 104 to 888 826 to 42 exact tiling clone, Suspected internal deletion 816/982
(83 %)
7 diff
(99.3 %id)
DA184513.
matches multiple genes
amygdala ZDHHC11.n-u 1 to 563 2 to 565   tiling clone, capped also hits gene toyuyu 564/564
(100 %)
1 diff
(99.9 %id)
DA332014 hippocampus ZDHHC11.n-u 461 to 1005 2 to 546 exact tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
AI286188 pooled ZDHHC11.n-u 550 to 966 417 to 1       417/417
(100 %)
0 diff
(100 %id)
AI364254 serous papillary carcinoma, high grade, 2pooled tumors, uterus ZDHHC11.n-u 653 to 966 314 to 1       314/314
(100 %)
2 diff
(99.4 %id)
BF757949 colon ZDHHC11.o-u 1 to 370 1 to 372 A2L D11* tiling clone,   372/372
(100 %)
11 diff
(97.1 %id)
DB061844 testis ZDHHC11.o-u 266 to 821 2 to 556   tiling clone, capped   555/555
(100 %)
4 diff
(99.3 %id)
DA128968 cerebellum ZDHHC11.p 1 to 458 2 to 459 exact tiling clone, capped   458/458
(100 %)
0 diff
(100 %id)
BF365398.
matches multiple genes
nervous_tumor ZDHHC11.p 592 to 740 9 to 157   tiling clone, also hits gene kameme 149/157
(94 %)
6 diff
(96.2 %id)
AL602302 human skeletal muscle ZDHHC11.q-u 1 to 614 1 to 614 exact tiling clone,   614/614
(100 %)
3 diff
(99.6 %id)
DA532702 brain ZDHHC11.r-u 1 to 569 2 to 570 L10Q tiling clone, capped   569/570
(99 %)
3 diff
(99.5 %id)
DA395743 thalamus ZDHHC11.s-u 1 to 518 2 to 519 exact tiling clone, capped   518/518
(100 %)
0 diff
(100 %id)
DA358480 subthalamic nucleus ZDHHC11.t 1 to 514 2 to 515   tiling clone, capped   514/514
(100 %)
0 diff
(100 %id)
AA928177 pooled ZDHHC11.u-u 1 to 321 324 to 4 exact tiling clone,   321/324
(99 %)
0 diff
(100 %id)
AK024233   Gene ZDHHC11, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AL514005 placenta Gene ZDHHC11, variant not shown         This clone was ignored    
W90746 liver and spleen Gene ZDHHC11, variant not shown         Suspected internal deletion, this clone was ignored    
W90802 liver and spleen Gene ZDHHC11, variant not shown         Suspected internal deletion, this clone was ignored    
AA746191 Kidney Gene ZDHHC11, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI651629.
matches multiple genes
pooled germ cell tumors Gene ZDHHC11, variant not shown         This clone was ignored, also hits gene kameme    
AI651629.
matches multiple genes
pooled germ cell tumors Gene kameme, variant not shown         This clone was ignored, also hits gene kameme    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p, .q-u, .r-u, .s-u, .t, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C