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Gene ZC3H7ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
355 supporting clones for gene ZC3H7A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU430933 lymph .a 1 to 400 8 to 407   tiling clone, Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 400/407
(98 %)
7 diff
(98.3 %id)
TI_154152659   .a 1 to 507 80 to 589       510/514
(99 %)
10 diff
(98.1 %id)
AY163807 Liver .a 3 to 3846 1 to 3844 exact tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 3844/3844
(100 %)
0 diff
(100 %id)
NM_014153.2   .a 3 to 3846 1 to 3844 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 3844/3844
(100 %)
0 diff
(100 %id)
AK026956   .a 807 to 3846 1 to 3040   available from FLJ, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 3040/3040
(100 %)
3 diff
(100.0 %id)
BI005148 head_normal .a 2918 to 3334 26 to 442       417/442
(94 %)
6 diff
(98.7 %id)
BI001376 head_normal .a 2925 to 3373 54 to 504       451/504
(89 %)
6 diff
(98.9 %id)
BI002175 head_normal .a 2925 to 3373 55 to 499       445/499
(89 %)
6 diff
(98.8 %id)
BI005577 head_normal .a 2925 to 3307 14 to 401       388/401
(96 %)
8 diff
(98.1 %id)
BI005588 head_normal .a 2925 to 3370 36 to 483       448/487
(91 %)
8 diff
(98.4 %id)
BQ355037 head_neck .a 2925 to 3370 55 to 506       452/506
(89 %)
6 diff
(98.9 %id)
BQ359893 head_normal .a 2925 to 3219 15 to 309       295/309
(95 %)
6 diff
(98.1 %id)
BQ189318 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2931 to 3425 1 to 493   fully sequenced, Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 493/493
(100 %)
1 diff
(99.8 %id)
TI_154106370   .a 2935 to 3835 959 to 65   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 895/970
(92 %)
14 diff
(98.6 %id)
TI_151731596   .a 2935 to 3837 976 to 83   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 894/1008
(88 %)
20 diff
(98.1 %id)
BF850875 lung_normal .a 2945 to 3379 434 to 1     Submitted on the opposite strand 434/434
(100 %)
1 diff
(99.8 %id)
FN155428 breast carcinoma .a 2949 to 3024 1 to 76       76/76
(100 %)
4 diff
(94.8 %id)
BP423051 small intestine .a 2955 to 3373 1 to 419     Submitted on the opposite strand 419/419
(100 %)
0 diff
(100 %id)
CB053010 leiomyosarcoma, soft tissue .a 2962 to 3342 1 to 380   fully sequenced, Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 380/380
(100 %)
9 diff
(97.7 %id)
BI005090 head_normal .a 2999 to 3338 391 to 57       335/394
(85 %)
0 diff
(100 %id)
TI_154037315   .a 3019 to 3842 893 to 78   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 816/819
(99 %)
35 diff
(95.8 %id)
BM462825 melanotic melanoma, skin .a 3023 to 3836 12 to 828   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 817/829
(98 %)
13 diff
(98.5 %id)
BI003143 head_normal .a 3049 to 3379 346 to 15       332/346
(95 %)
0 diff
(100 %id)
R31860 placenta .a 3093 to 3388 1 to 299       299/379
(78 %)
9 diff
(97.7 %id)
N78401 multiple sclerosis lesions .a 3099 to 3548 1 to 475   fully sequenced,   475/475
(100 %)
22 diff
(95.4 %id)
W44716 parathyroid gland, parathyroid tumor .a 3101 to 3457 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
BP418724 small intestine .a 3102 to 3520 1 to 421     Submitted on the opposite strand 421/421
(100 %)
3 diff
(99.3 %id)
BQ447441 Knee, Osteoarthritic Cartilage .a 3113 to 3842 749 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 731/731
(100 %)
1 diff
(99.9 %id)
CA446766 Chondrosarcoma, Left Pubic Bone .a 3114 to 3835 738 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 722/722
(100 %)
0 diff
(100 %id)
TI_154132415   .a 3117 to 3833 784 to 60   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 725/877
(82 %)
0 diff
(100 %id)
TI_154015336   .a 3118 to 3832 60 to 776     Submitted on the opposite strand 717/1361
(52 %)
7 diff
(99.5 %id)
FN160532 breast carcinoma .a 3121 to 3212 94 to 1     Submitted on the opposite strand 94/94
(100 %)
2 diff
(97.9 %id)
AW956306   .a 3123 to 3834 705 to 1     Submitted on the opposite strand 705/709
(99 %)
20 diff
(97.2 %id)
BI005156 head_normal .a 3137 to 3380 254 to 12       243/254
(95 %)
0 diff
(100 %id)
BM999443 Fibrosarcoma .a 3145 to 3835 707 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 691/691
(100 %)
0 diff
(100 %id)
BQ000760 lung, Metastatic Chondrosarcoma .a 3163 to 3835 689 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 673/680
(98 %)
0 diff
(100 %id)
N34244 melanocyte .a 3174 to 3677 1 to 504       504/504
(100 %)
0 diff
(100 %id)
BU632222 cell lines, Chondrosarcoma .a 3186 to 3837 668 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 652/652
(100 %)
0 diff
(100 %id)
CN348539 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3187 to 3836 659 to 10     Submitted on the opposite strand 650/659
(98 %)
0 diff
(100 %id)
CV374344 head_normal .a 3198 to 3379 189 to 6     Submitted on the opposite strand 184/189
(97 %)
0 diff
(100 %id)
BM990666 lung, Lung Focal Fibrosis .a 3221 to 3846 644 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 626/626
(100 %)
0 diff
(100 %id)
CK820122 Islets of Langerhans, Pancreas .a 3244 to 3838 595 to 1       595/603
(98 %)
0 diff
(100 %id)
AA625065 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3245 to 3636 1 to 395       395/395
(100 %)
16 diff
(96.0 %id)
CK820123 Islets of Langerhans, Pancreas .a 3245 to 3828 1 to 584       584/588
(99 %)
2 diff
(99.7 %id)
N49938 multiple sclerosis lesions .a 3248 to 3836 593 to 1       593/594
(99 %)
10 diff
(98.4 %id)
BM273280 Islets of Langerhans, Pancreas .a 3261 to 3488 1 to 228   fully sequenced,   228/228
(100 %)
0 diff
(100 %id)
BM354212 Islets of Langerhans, Pancreas .a 3261 to 3823 1 to 563       563/563
(100 %)
0 diff
(100 %id)
N42761 melanocyte .a 3264 to 3425 1 to 168   fully sequenced,   168/168
(100 %)
3 diff
(98.3 %id)
BQ359891 head_normal .a 3275 to 3380 126 to 20       107/126
(84 %)
0 diff
(100 %id)
BF590221 pooled .a 3281 to 3836 560 to 5       556/560
(99 %)
0 diff
(100 %id)
AA885475 pooled .a 3283 to 3836 558 to 5       554/558
(99 %)
0 diff
(100 %id)
BM273222 Islets of Langerhans, Pancreas .a 3284 to 3838 555 to 1       555/555
(100 %)
2 diff
(99.7 %id)
AA779587   .a 3292 to 3822 533 to 3       531/533
(99 %)
0 diff
(100 %id)
BM509935 Pancreas, Purified pancreatic islet .a 3298 to 3841 544 to 1       544/544
(100 %)
0 diff
(100 %id)
AI829683 pooled .a 3303 to 3835 534 to 1       534/534
(100 %)
1 diff
(99.9 %id)
AW471299 adenocarcinoma, Pancreas .a 3304 to 3836 538 to 7       532/538
(98 %)
0 diff
(100 %id)
CB053009 leiomyosarcoma, soft tissue .a 3312 to 3837 553 to 28   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 526/526
(100 %)
1 diff
(99.9 %id)
FN141989 breast carcinoma .a 3324 to 3428 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
BE349157 malignant melanoma, metastatic to lymphnode, skin .a 3324 to 3835 512 to 1       512/512
(100 %)
0 diff
(100 %id)
C06463   .a 3331 to 3836 530 to 8       523/676
(77 %)
0 diff
(100 %id)
D11715 Liver .a 3337 to 3773 14 to 460       447/531
(84 %)
19 diff
(96.5 %id)
AI336215 lung .a 3341 to 3838 498 to 1       498/498
(100 %)
1 diff
(99.8 %id)
BQ027548 mixed .a 3351 to 3837 503 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 487/487
(100 %)
0 diff
(100 %id)
C75366   .a 3358 to 3836 503 to 9       495/504
(98 %)
0 diff
(100 %id)
AI399933 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3366 to 3835 469 to 1       469/469
(100 %)
3 diff
(99.4 %id)
AI620423 Prostate .a 3366 to 3835 470 to 1       470/470
(100 %)
0 diff
(100 %id)
CA444438 lung, Metastatic Chondrosarcoma .a 3366 to 3842 495 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 477/477
(100 %)
0 diff
(100 %id)
DB568437 hypothalamus .a 3370 to 3837 1 to 468     Submitted on the opposite strand 468/469
(99 %)
1 diff
(99.8 %id)
DB542509 hippocampus .a 3382 to 3835 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
AA994797 breast .a 3382 to 3836 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
AI392643 pooled .a 3383 to 3836 454 to 1       454/454
(100 %)
4 diff
(99.2 %id)
AI400371 Prostate .a 3383 to 3847 465 to 1       465/465
(100 %)
0 diff
(100 %id)
N31925 melanocyte .a 3395 to 3842 449 to 1   fully sequenced,   449/449
(100 %)
1 diff
(99.8 %id)
CK299465 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3395 to 3835 459 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 441/441
(100 %)
0 diff
(100 %id)
BI493057.
matches multiple genes
cochlea, ear .a 3398 to 3837 467 to 28   AAA Possibly primed on the genome, locally A rich (13/14 A in genome downstream of last aligned base), also hits gene geedeybu 440/447
(98 %)
3 diff
(99.4 %id)
AW022092 cochlea, ear .a 3398 to 3838 8 to 450       443/454
(97 %)
3 diff
(99.4 %id)
FN086168 breast carcinoma .a 3399 to 3481 14 to 96       83/96
(86 %)
6 diff
(93.8 %id)
AW574957 lymph .a 3404 to 3833 449 to 20   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 430/432
(99 %)
0 diff
(100 %id)
N80814.
matches multiple genes
lung .a 3406 to 3837 440 to 1     also hits gene histone.20 440/444
(99 %)
17 diff
(96.2 %id)
AI078759 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3407 to 3835 429 to 1       429/429
(100 %)
4 diff
(99.1 %id)
AI042474 senescent fibroblast .a 3408 to 3836 433 to 5       429/433
(99 %)
0 diff
(100 %id)
AI928418 normal prostate, Prostate .a 3415 to 3846 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AI784409 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 3416 to 3837 422 to 1       422/422
(100 %)
0 diff
(100 %id)
AI080706 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3424 to 3835 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
AI380697 B-cell, chronic lymphotic leukemia .a 3430 to 3842 435 to 23   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 413/413
(100 %)
0 diff
(100 %id)
AW305165 brain, three pooled meningiomas .a 3440 to 3836 397 to 1       397/397
(100 %)
0 diff
(100 %id)
AI167607 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3446 to 3842 398 to 2       397/398
(99 %)
0 diff
(100 %id)
AA770580 carcinoid, lung .a 3451 to 3847 405 to 9       397/405
(98 %)
0 diff
(100 %id)
AI086263   .a 3451 to 3837 400 to 14   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 387/387
(100 %)
0 diff
(100 %id)
BM273044 Islets of Langerhans, Pancreas .a 3458 to 3838 381 to 1   fully sequenced,   381/381
(100 %)
0 diff
(100 %id)
BP396882 pancreatic islet .a 3460 to 3826 1 to 367     Submitted on the opposite strand 367/380
(96 %)
7 diff
(98.2 %id)
BG056770 anaplastic oligodendroglioma, brain .a 3464 to 3846 394 to 12   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 383/383
(100 %)
1 diff
(99.8 %id)
AW105076 pooled .a 3465 to 3836 375 to 4       372/375
(99 %)
0 diff
(100 %id)
AI278085 placenta .a 3466 to 3833 376 to 7       370/376
(98 %)
0 diff
(100 %id)
D45537 lung .a 3470 to 3722 1 to 253     Submitted on the opposite strand 253/253
(100 %)
1 diff
(99.7 %id)
AA907612 pooled .a 3471 to 3843 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AI073626 senescent fibroblast .a 3475 to 3836 372 to 7       366/372
(98 %)
0 diff
(100 %id)
AI677803 adenocarcinoma, Pancreas .a 3480 to 3835 356 to 1       356/356
(100 %)
1 diff
(99.8 %id)
N25645 melanocyte .a 3483 to 3842 362 to 1       362/362
(100 %)
5 diff
(98.7 %id)
AI275680 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3489 to 3838 355 to 4       352/355
(99 %)
0 diff
(100 %id)
AI698566 pooled .a 3489 to 3836 351 to 5       347/351
(98 %)
0 diff
(100 %id)
H73496 liver and spleen .a 3496 to 3838 350 to 1     Submitted on the opposite strand 350/351
(99 %)
7 diff
(98.1 %id)
AI280459 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3511 to 3845 340 to 6       335/340
(98 %)
0 diff
(100 %id)
N62630 multiple sclerosis lesions .a 3518 to 3835 320 to 1   fully sequenced,   320/320
(100 %)
4 diff
(98.8 %id)
FN066148 breast carcinoma .a 3521 to 3650 1 to 131       131/131
(100 %)
2 diff
(98.5 %id)
AI225205 lymph node, lymphoma, follicular mixed small and largecell .a 3522 to 3835 329 to 16   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 314/314
(100 %)
0 diff
(100 %id)
AW196712 adenocarcinoma, Pancreas .a 3525 to 3836 314 to 3       312/314
(99 %)
0 diff
(100 %id)
AA375839 lung .a 3551 to 3835 286 to 1     Submitted on the opposite strand 286/286
(100 %)
2 diff
(99.4 %id)
AI306433 2 pooled tumors (clear cell type), Kidney .a 3551 to 3842 307 to 16       292/307
(95 %)
0 diff
(100 %id)
AW769692 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 3554 to 3835 285 to 1       285/285
(100 %)
5 diff
(98.3 %id)
W32294 parathyroid gland, parathyroid tumor .a 3567 to 3836 279 to 9       271/287
(94 %)
0 diff
(100 %id)
F13642   .a 3569 to 3834 268 to 5       264/268
(98 %)
0 diff
(100 %id)
AA902970 leiomyosarcoma, soft tissue .a 3586 to 3837 264 to 13   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 252/252
(100 %)
1 diff
(99.7 %id)
AI273046 Kidney, renal cell tumor .a 3621 to 3845 254 to 30   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 225/225
(100 %)
2 diff
(99.2 %id)
AA644677 lung .a 3626 to 3836 210 to 1       210/210
(100 %)
2 diff
(99.1 %id)
AI446385 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3627 to 3837 211 to 1       211/211
(100 %)
0 diff
(100 %id)
FN065305 breast carcinoma .a 3652 to 3765 1 to 115       115/115
(100 %)
1 diff
(99.2 %id)
AI217245   .a 3660 to 3839 183 to 4       180/183
(98 %)
0 diff
(100 %id)
AA235613 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3672 to 3839 168 to 1       168/168
(100 %)
0 diff
(100 %id)
FN051172 breast carcinoma .a 3757 to 3833 80 to 3     Submitted on the opposite strand 78/80
(97 %)
0 diff
(100 %id)
DB089759 testis .b 1 to 573 2 to 574   tiling clone, capped   573/573
(100 %)
0 diff
(100 %id)
DA160892 amygdala .b 10 to 484 2 to 476   capped   475/480
(98 %)
1 diff
(99.8 %id)
DA269149 caudate nucleus .b 10 to 286 2 to 278   capped   277/277
(100 %)
0 diff
(100 %id)
DA504070 brain .b 10 to 484 2 to 477   capped   476/477
(99 %)
2 diff
(99.6 %id)
DA523048 brain .b 10 to 573 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA936467 Spleen .b 10 to 600 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB473740 hippocampus .b 15 to 466 1 to 452       452/452
(100 %)
4 diff
(99.2 %id)
CR975469 T-Lymphocytes .b 19 to 913 1 to 895       895/898
(99 %)
1 diff
(99.9 %id)
DA805004 brain .b 20 to 495 2 to 478   capped   477/477
(100 %)
3 diff
(99.4 %id)
DA434660 tongue, tumor tissue .b 22 to 585 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA623370 Kidney .b 22 to 567 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB160262 thymus .b 22 to 612 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA448629 tongue, tumor tissue .b 25 to 478 2 to 455   capped   454/454
(100 %)
1 diff
(99.8 %id)
DA489515 brain .b 25 to 569 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA820121   .b 25 to 588 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA883147   .b 25 to 591 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB057881 testis .b 25 to 499 2 to 477   capped   476/476
(100 %)
2 diff
(99.6 %id)
DB105191 thymus .b 25 to 572 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB220777 trachea .b 25 to 333 2 to 310   capped   309/309
(100 %)
1 diff
(99.7 %id)
DA439383 tongue, tumor tissue .b 30 to 620 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
CN484340 eye .b 30 to 640 1 to 611       611/611
(100 %)
1 diff
(99.9 %id)
CB961316 placenta, pre-eclamptic placenta .b 31 to 705 27 to 708       682/811
(84 %)
14 diff
(98.3 %id)
DA934895 Spleen .b 32 to 595 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB219825 trachea .b 33 to 588 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA318562 hippocampus .b 34 to 599 2 to 566   capped   565/572
(98 %)
1 diff
(99.9 %id)
DA409408 thalamus .b 34 to 582 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB081290 testis .b 34 to 393 2 to 361   capped   360/360
(100 %)
0 diff
(100 %id)
DB285277 uterus .b 34 to 583 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA935877 Spleen .b 40 to 637 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DR000576 fetal brain .b 41 to 723 10 to 690       681/697
(97 %)
9 diff
(98.8 %id)
BC036857 Skin, melanotic melanoma. .b 76 to 1670 12 to 1606   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1595/1601
(99 %)
2 diff
(99.9 %id)
BC046363 Skin, melanotic melanoma. .b 116 to 3812 1 to 3697 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 3697/3697
(100 %)
1 diff
(100.0 %id)
BM469972 melanotic melanoma, skin .b 117 to 803 1 to 691       689/1007
(68 %)
10 diff
(99.1 %id)
CT002559 T-Lymphocytes .b 143 to 541 58 to 456       399/456
(87 %)
6 diff
(98.7 %id)
DA221687 brain .b 152 to 814 2 to 665   capped   664/664
(100 %)
4 diff
(99.4 %id)
CN293050 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 160 to 790 1 to 631       631/631
(100 %)
0 diff
(100 %id)
DA479101   .b 217 to 781 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DN994944 brain, whole brain .b 219 to 809 1 to 591       591/591
(100 %)
7 diff
(98.9 %id)
AK000325   .b 269 to 2647 1 to 2378   available from FLJ, AAA   2378/2378
(100 %)
2 diff
(100.0 %id)
DA672918   .b 315 to 908 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB004850 breast, tumor tissue .b 330 to 865 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA471663   .b 504 to 1068 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA125294 cerebellum .b 529 to 1086 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA406018 thalamus .b 561 to 1126 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA591283 lung .b 564 to 1144 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
BU431558 lymph .b 659 to 1235 1 to 577       577/577
(100 %)
4 diff
(99.4 %id)
DA689945   .b 663 to 1199 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA842965 placenta .b 664 to 1250 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA767182 tongue .b 665 to 1239 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
TI_154153484   .b 666 to 1285 81 to 700       620/622
(99 %)
4 diff
(99.4 %id)
CF137895 lymph .b 745 to 1143 7 to 405       399/405
(98 %)
6 diff
(98.6 %id)
TI_154167583   .b 745 to 1226 80 to 561       482/483
(99 %)
1 diff
(99.8 %id)
CN348536 embryonic stem cells, cell lines H1, H7, andH9 .b 777 to 1306 1 to 531       531/531
(100 %)
1 diff
(99.9 %id)
R17132 whole brain .b 821 to 1127 1 to 309       309/351
(88 %)
7 diff
(98.1 %id)
BF764824 colon_est .b 855 to 1155 9 to 315       307/315
(97 %)
10 diff
(96.9 %id)
AA249318   .b 973 to 1189 39 to 255       217/255
(85 %)
6 diff
(97.7 %id)
BQ322855 colon_est .b 998 to 1177 38 to 217       180/217
(82 %)
9 diff
(95.9 %id)
CX872878 embryonic stem .b 1052 to 1857 1 to 806       806/806
(100 %)
0 diff
(100 %id)
BX479838   .b 1092 to 1638 1 to 547       547/547
(100 %)
0 diff
(100 %id)
AW242818 Kidney .b 1174 to 1638 465 to 1       465/465
(100 %)
3 diff
(99.4 %id)
BM801931 duodenal adenocarcinoma, cell line, small intestine .b 1230 to 2262 1 to 1039       1039/1097
(94 %)
24 diff
(97.9 %id)
AA130072 uterus .b 1238 to 1679 1 to 445       445/454
(98 %)
6 diff
(98.7 %id)
DA562060 heart .b 1264 to 1819 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA505056 brain .b 1330 to 1886 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BU182979 melanotic melanoma, skin .b 1360 to 1952 1 to 599       599/1038
(57 %)
18 diff
(98.3 %id)
BF746629 breast .b 1370 to 1787 415 to 2     Submitted on the opposite strand 414/419
(98 %)
5 diff
(98.9 %id)
BG546604 lung .b 1379 to 2042 1 to 661       661/661
(100 %)
3 diff
(99.6 %id)
Z43031 brain, total brain .b 1401 to 1638 238 to 1       238/238
(100 %)
0 diff
(100 %id)
CX781347 human embryonic stem cells .b 1461 to 2252 26 to 816     Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 791/816
(96 %)
6 diff
(99.3 %id)
CN348538 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1495 to 2055 1 to 561       561/562
(99 %)
2 diff
(99.7 %id)
BE786627 large cell carcinoma, lung .b 1591 to 2339 1 to 748       748/884
(84 %)
22 diff
(97.6 %id)
DA750212   .b 1598 to 2173 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BM458205 leiomyosarcoma, uterus .b 1630 to 2494 1 to 871   AAA   869/1061
(81 %)
20 diff
(98.2 %id)
AA826024 ovary .b 1639 to 1712 8 to 81       74/81
(91 %)
9 diff
(88.9 %id)
AA834809 ovary .b 1639 to 1999 7 to 366       360/368
(97 %)
10 diff
(97.3 %id)
CN348537 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1657 to 2105 1 to 449       449/449
(100 %)
0 diff
(100 %id)
DA668828 esophagus .b 1663 to 2218 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
AL694193   .b 1698 to 2281 18 to 601       589/601
(98 %)
6 diff
(99.1 %id)
AL589405 human spinal cord .b 1734 to 1901 22 to 189       168/189
(88 %)
6 diff
(96.9 %id)
CX870397 embryonic stem .b 1784 to 2566 1 to 783       783/783
(100 %)
0 diff
(100 %id)
BM476432 lymph, lymphoma, cell line .b 1786 to 2740 1 to 967       967/1028
(94 %)
17 diff
(98.4 %id)
CN348540 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1803 to 2216 1 to 414       414/414
(100 %)
0 diff
(100 %id)
AW748409 breast .b 1843 to 2061 218 to 1       218/218
(100 %)
8 diff
(96.4 %id)
AW748439 breast .b 1848 to 2061 213 to 1       213/213
(100 %)
7 diff
(96.8 %id)
AW403888 lymph .b 1849 to 2383 1 to 534       534/534
(100 %)
7 diff
(98.7 %id)
TI_154140844   .b 1856 to 2416 80 to 639       560/560
(100 %)
3 diff
(99.5 %id)
BU521039 leiomyosarcoma, uterus .b 1884 to 2605 1 to 728       728/820
(88 %)
8 diff
(99.1 %id)
TI_149307603   .b 1931 to 2656 812 to 92   AAA   721/913
(78 %)
6 diff
(99.4 %id)
DA371914 thalamus .b 1934 to 2480 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
CD244866 White Matter .b 1936 to 2747 1 to 819       819/939
(87 %)
16 diff
(98.3 %id)
BM979356 lung, Primary Lung Epithelial Cells .b 1960 to 2662 704 to 4       701/706
(99 %)
3 diff
(99.6 %id)
DA070597 cerebellum .b 2015 to 2564 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
BP276625 Kidney .b 2064 to 2605 1 to 542       542/580
(93 %)
5 diff
(99.2 %id)
DA913154   .b 2102 to 2665 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DR763035 embryonic stem .b 2103 to 2867 1 to 765       765/765
(100 %)
0 diff
(100 %id)
AW964076   .b 2123 to 2708 8 to 592       585/594
(98 %)
11 diff
(98.2 %id)
AA346343 omentum .b 2125 to 2492 10 to 377       368/383
(96 %)
15 diff
(96.1 %id)
AA353564   .b 2161 to 2540 1 to 379       379/384
(98 %)
5 diff
(98.7 %id)
BM503787 Pancreas, Purified pancreatic islet .b 2163 to 2792 1 to 631       631/631
(100 %)
4 diff
(99.4 %id)
BG925073 cartilage .b 2164 to 2728 86 to 650       565/582
(97 %)
1 diff
(99.9 %id)
AW169959 pooled .b 2177 to 2647 471 to 1       471/471
(100 %)
0 diff
(100 %id)
AI347278 colon, colon tumor, RER+ .b 2182 to 2646 465 to 1       465/465
(100 %)
0 diff
(100 %id)
AA130073 uterus .b 2216 to 2647 432 to 1       432/432
(100 %)
0 diff
(100 %id)
AI635241 adenocarcinoma, Pancreas .b 2224 to 2648 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
AW674298 cervix .b 2224 to 2647 424 to 1       424/424
(100 %)
1 diff
(99.8 %id)
AI768721 Kidney .b 2248 to 2688 441 to 1       441/441
(100 %)
0 diff
(100 %id)
R43225 whole brain .b 2260 to 2654 412 to 2       409/416
(98 %)
19 diff
(95.5 %id)
AA620504 lung, lung carcinoma .b 2264 to 2649 386 to 1       386/386
(100 %)
0 diff
(100 %id)
CA391605 eye, RPE/choroid .b 2271 to 2921 1 to 651       651/651
(100 %)
0 diff
(100 %id)
BQ723153 sympathetic trunk .b 2295 to 3156 1 to 882       882/897
(98 %)
38 diff
(95.8 %id)
BG400923 Kidney .b 2304 to 2905 1 to 596       596/898
(66 %)
18 diff
(98.0 %id)
FN090537 breast carcinoma .b 2368 to 2458 1 to 88       88/88
(100 %)
8 diff
(91.0 %id)
AA248366   .b 2391 to 2734 1 to 345       345/348
(99 %)
23 diff
(93.4 %id)
AA384161 thyroid gland .b 2397 to 2656 1 to 260       260/260
(100 %)
2 diff
(99.3 %id)
AI220215 pooled .b 2416 to 2647 232 to 1       232/232
(100 %)
2 diff
(99.2 %id)
BE929874 placenta_normal .b 2424 to 2801 1 to 378       378/379
(99 %)
17 diff
(95.6 %id)
BF218004 brain, glioblastoma .b 2436 to 3131 1 to 691       691/891
(77 %)
31 diff
(96.6 %id)
CD252490 White Matter .b 2497 to 3098 68 to 684       616/1019
(60 %)
31 diff
(97.0 %id)
BQ073087 leukocyte .b 2500 to 3118 1 to 631       531/1365
(38 %)
31 diff
(97.8 %id)
CR984095 T-Lymphocytes .b 2563 to 3335 1 to 774       774/774
(100 %)
2 diff
(99.8 %id)
TI_1948083587   .b 2589 to 3041 130 to 583       454/483
(93 %)
10 diff
(98.0 %id)
TI_1948083746   .b 2589 to 3089 139 to 644       506/1268
(39 %)
27 diff
(97.9 %id)
TI_1948083815   .b 2589 to 2999 138 to 548       411/438
(93 %)
7 diff
(98.5 %id)
CV030063 mixed .b 2590 to 3099 1 to 510       510/583
(87 %)
9 diff
(98.5 %id)
BM853115 Ascites, stomach .b 2603 to 3155 1 to 553       553/553
(100 %)
0 diff
(100 %id)
FN064861 breast carcinoma .b 2735 to 2797 64 to 4     Submitted on the opposite strand 61/65
(93 %)
0 diff
(100 %id)
AV703289 adrenal gland .b 2740 to 3138 7 to 405       399/405
(98 %)
6 diff
(98.6 %id)
BM693177 eye, Retina Foveal and Macular .b 2798 to 3248 1 to 452   fully sequenced, Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 452/452
(100 %)
1 diff
(99.8 %id)
CB994222 placenta, pre-eclamptic placenta .b 2835 to 3476 24 to 677       654/871
(75 %)
33 diff
(96.3 %id)
BE865965 bladder, carcinoma, cell line .b 2850 to 3453 1 to 600       600/600
(100 %)
13 diff
(97.9 %id)
AA317219 retina .b 2853 to 3047 1 to 195       195/195
(100 %)
0 diff
(100 %id)
BF091475 testis_normal .b 2856 to 3221 1 to 367       367/367
(100 %)
3 diff
(99.2 %id)
AW967055   .b 2862 to 3538 1 to 675       675/680
(99 %)
29 diff
(95.8 %id)
BG988236 head_neck .b 2867 to 3350 1 to 485       485/485
(100 %)
16 diff
(96.8 %id)
BG988248 head_neck .b 2868 to 3355 1 to 489       489/506
(96 %)
15 diff
(97.1 %id)
BI001399 head_normal .b 2868 to 3356 502 to 12       491/521
(94 %)
2 diff
(99.7 %id)
BI002183 head_normal .b 2868 to 3346 1 to 477       477/477
(100 %)
9 diff
(98.2 %id)
BI002177 head_normal .b 2874 to 3356 504 to 23       482/504
(95 %)
1 diff
(99.9 %id)
BG986998 head_neck .b 2875 to 3350 13 to 487       475/487
(97 %)
8 diff
(98.4 %id)
BI001382 head_normal .b 2875 to 3353 24 to 502       479/504
(95 %)
21 diff
(95.9 %id)
BI001393 head_normal .b 2875 to 3348 25 to 499       475/501
(94 %)
23 diff
(95.5 %id)
BI002156 head_normal .b 2875 to 3350 13 to 484       472/484
(97 %)
13 diff
(97.4 %id)
BI005093 head_normal .b 2875 to 3044 22 to 192       171/197
(86 %)
8 diff
(96.0 %id)
BI005095 head_normal .b 2875 to 3088 13 to 229       217/231
(93 %)
12 diff
(94.9 %id)
BI005151 head_normal .b 2875 to 3287 9 to 422       414/425
(97 %)
12 diff
(97.2 %id)
CV374353 head_normal .b 2875 to 3074 11 to 208       198/213
(92 %)
22 diff
(89.7 %id)
BG988246 head_neck .b 2877 to 3357 487 to 8       480/487
(98 %)
2 diff
(99.6 %id)
BG987004 head_neck .b 2881 to 3356 489 to 14       476/489
(97 %)
0 diff
(100 %id)
BG987010 head_neck .b 2881 to 3357 505 to 28       478/505
(94 %)
0 diff
(100 %id)
BI005097 head_normal .b 2881 to 3356 494 to 18       477/494
(96 %)
0 diff
(100 %id)
AA281517 germinal center B cell .b 2883 to 3069 1 to 188       188/188
(100 %)
1 diff
(99.5 %id)
BM668406 eye, Retina Foveal and Macular .b 3218 to 3812 613 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 595/595
(100 %)
1 diff
(99.9 %id)
CX781272 human embryonic stem cells .b 3307 to 3808 531 to 30   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 502/506
(99 %)
0 diff
(100 %id)
AK091803 lung .c 1 to 2343 1 to 2341 R9K R11A Q12A Q13E N14H ... tiling clone, available from FLJ,   2341/2341
(100 %)
3 diff
(99.9 %id)
AX747194   .c 1 to 2343 1 to 2341 R9K R11A Q12A Q13E N14H ...     2341/2341
(100 %)
3 diff
(99.9 %id)
DA996102 synovial membrane tissue from rheumatioidarthritis .c 1 to 247 2 to 248   tiling clone, capped   247/247
(100 %)
0 diff
(100 %id)
DA584315 lung .c 2 to 282 2 to 280   capped   279/279
(100 %)
1 diff
(99.7 %id)
DB210560 trachea .c 2 to 485 2 to 485   capped   484/484
(100 %)
0 diff
(100 %id)
DA834636 placenta .c 6 to 331 2 to 327   capped   326/326
(100 %)
0 diff
(100 %id)
BU165504 eye, retinoblastoma .c 7 to 888 1 to 890       890/890
(100 %)
13 diff
(98.6 %id)
DA702501   .c 20 to 478 2 to 460   capped   459/459
(100 %)
2 diff
(99.6 %id)
DA313418 hippocampus .c 21 to 580 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
CR747554 melanotic melanoma, skin .c 31 to 543 1 to 513       513/513
(100 %)
5 diff
(99.1 %id)
CR978719 T-Lymphocytes .c 40 to 888 1 to 850       850/852
(99 %)
3 diff
(99.7 %id)
BM541920 melanotic melanoma, skin .c 42 to 727 1 to 689   available from MGC,   689/1223
(56 %)
6 diff
(99.6 %id)
BQ430708 melanotic melanoma, skin .c 43 to 450 1 to 408       408/1098
(37 %)
4 diff
(99.7 %id)
DB319344 lung .c 1795 to 2343 549 to 1       549/549
(100 %)
1 diff
(99.9 %id)
DB234951 trachea .d 1 to 512 2 to 513   tiling clone, capped   512/516
(99 %)
2 diff
(99.7 %id)
DA558197   .d 107 to 663 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA886598   .d 155 to 684 2 to 531   tiling clone, capped   530/530
(100 %)
0 diff
(100 %id)
BM463349 embryonal carcinoma, cell line, testis .d 683 to 1676 1 to 1006   tiling clone,   1006/1030
(97 %)
29 diff
(97.2 %id)
BM456492 lymph, lymphoma, cell line .d 1094 to 1994 1 to 902   tiling clone,   902/1018
(88 %)
10 diff
(99.1 %id)
BI861485 breast, mammary adenocarcinoma, cell line .d 1216 to 2074 1 to 861   tiling clone,   861/892
(96 %)
18 diff
(98.0 %id)
TI_57192589   .d 1216 to 2074 48 to 908       861/959
(89 %)
18 diff
(98.2 %id)
DA780971 brain .e 1 to 562 2 to 563   tiling clone, to resequence, capped   562/562
(100 %)
0 diff
(100 %id)
DA927665 small intestine .e 210 to 780 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DB326233 brain .e 1487 to 2018 532 to 1   tiling clone, to resequence,   532/541
(98 %)
0 diff
(100 %id)
AK026827 Human lung .f 1 to 1929 1 to 1929 exact tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1929/1929
(100 %)
8 diff
(99.6 %id)
BM804608 lymph, lymphoma, cell line .f 120 to 1011 1 to 907       907/1218
(74 %)
58 diff
(95.3 %id)
BE895375 melanotic melanoma, skin .f 180 to 803 1 to 631   tiling clone,   631/861
(73 %)
11 diff
(98.8 %id)
CT002907 T-Lymphocytes .g 1 to 831 1 to 831 exact tiling clone,   831/831
(100 %)
0 diff
(100 %id)
AA352305   .g 463 to 764 1 to 304       304/304
(100 %)
3 diff
(99.1 %id)
DB156013 thymus .h 1 to 289 2 to 291   tiling clone, capped   290/298
(97 %)
3 diff
(99.0 %id)
BX482827   .h 285 to 862 40 to 615   tiling clone,   576/615
(93 %)
3 diff
(99.6 %id)
AI815665 brain, frontal lobe .h 320 to 802 1 to 483   tiling clone,   483/483
(100 %)
0 diff
(100 %id)
AW163795 brain, frontal lobe .h 320 to 751 1 to 432       432/432
(100 %)
0 diff
(100 %id)
AA649332 germinal center B cell .h 368 to 690 1 to 320     Submitted on the opposite strand 320/320
(100 %)
7 diff
(97.9 %id)
AV742880 cord Blood .h 580 to 1154 37 to 596       560/600
(93 %)
6 diff
(99.0 %id)
AF161540 blood .h 590 to 3221 1 to 2629 exact     2629/2629
(100 %)
18 diff
(99.4 %id)
AA973528 carcinoid, lung .h 637 to 1037 1 to 400     Submitted on the opposite strand 400/400
(100 %)
1 diff
(99.8 %id)
AL711871 human skeletal muscle .h 666 to 1171 1 to 506       506/506
(100 %)
0 diff
(100 %id)
AL711878 human skeletal muscle .h 666 to 1172 1 to 507   tiling clone,   507/507
(100 %)
0 diff
(100 %id)
AA334215   .h 849 to 1166 1 to 322       322/322
(100 %)
3 diff
(99.1 %id)
DA349922 substantia nigra .h 930 to 1486 2 to 559   tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
AA641734 germinal center B cell .h 1160 to 1593 16 to 451       436/451
(96 %)
6 diff
(98.7 %id)
BM677579 eye, fetal eye .h 1288 to 2051 782 to 19   tiling clone, AAA   764/764
(100 %)
3 diff
(99.7 %id)
CR743454 carcinoid, lung .h 1379 to 2051 687 to 15   AAA Submitted on the opposite strand 673/673
(100 %)
2 diff
(99.8 %id)
AA885491 pooled .h 1475 to 2051 577 to 1       577/577
(100 %)
3 diff
(99.5 %id)
AI690260 carcinoid, lung .h 1513 to 2050 538 to 1   tiling clone,   538/538
(100 %)
0 diff
(100 %id)
AK001869 placenta .h 1546 to 3227 1 to 1682 exact tiling clone, available from FLJ,   1682/1682
(100 %)
4 diff
(99.8 %id)
AU135877 placenta .h 1547 to 2311 2 to 773   capped   772/773
(99 %)
16 diff
(98.0 %id)
BF512589   .h 1561 to 2051 507 to 17   AAA   491/491
(100 %)
2 diff
(99.6 %id)
AK000889 whole embryo, mainly head .h 1610 to 3216 1 to 1607 exact available from FLJ,   1607/1607
(100 %)
3 diff
(99.9 %id)
AU117124 whole embryo, mainly head .h 1611 to 2426 2 to 817   capped   816/816
(100 %)
10 diff
(98.8 %id)
AI684819 pooled .h 1686 to 1924 239 to 1       239/239
(100 %)
1 diff
(99.6 %id)
AA651797 germinal center B cell .h 1721 to 2058 340 to 3       338/340
(99 %)
3 diff
(99.2 %id)
W15611 lung .h 1740 to 2186 1 to 455       455/457
(99 %)
13 diff
(97.2 %id)
BC012575 skeletal muscle .h 1777 to 3216 1 to 1440 exact available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1440/1440
(100 %)
5 diff
(99.7 %id)
BF670528 muscle (skeletal) .h 1780 to 2452 1 to 660   available from MGC,   660/882
(74 %)
24 diff
(97.3 %id)
CD250955 brain, Pituitary .h 1862 to 2727 45 to 918 exact     874/920
(95 %)
30 diff
(96.8 %id)
AU144042 whole embryo, mainly head .h 2629 to 3216 594 to 1       594/595
(99 %)
15 diff
(97.5 %id)
AU156340 placenta .h 2639 to 3227 586 to 1       586/592
(98 %)
14 diff
(97.7 %id)
DB346495 thymus .h 2680 to 3218 539 to 1       539/540
(99 %)
0 diff
(100 %id)
AW157757 brain, frontal lobe .h 2704 to 3217 521 to 8       514/521
(98 %)
0 diff
(100 %id)
AI879967 brain, frontal lobe .h 2751 to 3217 475 to 8       468/475
(98 %)
0 diff
(100 %id)
H73265 liver and spleen .i 1 to 333 10 to 349   tiling clone, Submitted on the opposite strand 340/434
(78 %)
1 diff
(99.8 %id)
BG537698 lung .i 179 to 719 1 to 538 N14T E15*     538/538
(100 %)
9 diff
(98.4 %id)
TI_1948083659   .i 211 to 675 149 to 613   tiling clone,   464/509
(91 %)
6 diff
(98.9 %id)
BF570551 melanotic melanoma, high MDR, skin .i 222 to 853 1 to 632       630/903
(69 %)
38 diff
(95.8 %id)
N57423 placenta .i 223 to 697 1 to 477       477/477
(100 %)
6 diff
(98.8 %id)
BP198240 adrenal gland .i 224 to 807 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
H42646 breast .i 243 to 582 1 to 342       342/487
(70 %)
6 diff
(98.8 %id)
BM850266 stomach .i 265 to 665 1 to 401       401/401
(100 %)
0 diff
(100 %id)
W38877 parathyroid gland, parathyroid tumor .i 268 to 844 1 to 583       583/584
(99 %)
16 diff
(97.3 %id)
AI741810 pooled .i 271 to 698 444 to 17   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 428/444
(96 %)
0 diff
(100 %id)
R05706 liver and spleen .i 303 to 592 1 to 297       297/305
(97 %)
18 diff
(94.1 %id)
AA203413 liver and spleen .i 304 to 918 1 to 607       607/866
(70 %)
13 diff
(98.5 %id)
BX100577 liver and spleen .i 306 to 1073 1 to 769   tiling clone,   769/769
(100 %)
1 diff
(99.9 %id)
BM798173 Ascites, stomach .i 307 to 814 1 to 508       508/508
(100 %)
0 diff
(100 %id)
R05707 liver and spleen .i 1230 to 1418 190 to 2   tiling clone,   189/190
(99 %)
0 diff
(100 %id)
R21581 whole brain .j 1 to 412 426 to 1   tiling clone, Submitted on the opposite strand 426/430
(99 %)
22 diff
(94.9 %id)
AI023771 liver and spleen .j 106 to 585 1 to 480 exact tiling clone, Submitted on the opposite strand 480/480
(100 %)
0 diff
(100 %id)
BM683127 eye, fetal eye .k 1 to 655 42 to 696   tiling clone, Submitted on the opposite strand 655/678
(96 %)
11 diff
(98.4 %id)
BM719172 eye, fetal eye .k 277 to 950 688 to 15 exact tiling clone, AAA Submitted on the opposite strand 674/674
(100 %)
2 diff
(99.8 %id)
BX955178   .l 1 to 702 1 to 702   tiling clone,   702/702
(100 %)
0 diff
(100 %id)
TI_57231407   .l 89 to 792 25 to 766       742/836
(88 %)
6 diff
(99.3 %id)
BI905998 leukocyte .l 98 to 792 1 to 733       733/803
(91 %)
18 diff
(97.8 %id)
AA169679   .l 163 to 513 1 to 353       353/353
(100 %)
2 diff
(99.5 %id)
BX498171 Liver .l 271 to 731 9 to 470       462/470
(98 %)
2 diff
(99.6 %id)
AI806417 pooled .l 546 to 1045 500 to 1       500/500
(100 %)
4 diff
(99.2 %id)
AW631175 pooled .l 582 to 1044 464 to 2       463/464
(99 %)
0 diff
(100 %id)
DA867682 Prostate .l 684 to 1234 2 to 552   tiling clone, capped   551/551
(100 %)
1 diff
(99.9 %id)
AA169492   .l 1117 to 1522 406 to 1 exact tiling clone,   406/415
(97 %)
1 diff
(99.8 %id)
BX647154 human cerebellum .m 1 to 1410 1 to 1410 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1410/1410
(100 %)
1 diff
(100.0 %id)
AA743692 germinal center B cell .n 1 to 415 417 to 3 exact tiling clone,   415/417
(99 %)
2 diff
(99.6 %id)
DB070172 testis .o 1 to 531 2 to 532 exact tiling clone, capped   531/531
(100 %)
0 diff
(100 %id)
DA213398 brain .p 1 to 421 2 to 423   tiling clone, capped   422/422
(100 %)
3 diff
(99.3 %id)
DA752165   .p 12 to 563 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DB233574 trachea .p 12 to 295 2 to 285   capped   284/284
(100 %)
0 diff
(100 %id)
DA614292   .p 48 to 618 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA147235 amygdala .q 1 to 574 2 to 575 M24V tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
EC474765 Prostate .r 1 to 104 1 to 100 F11L I12F S13Q A14L L15S ... tiling clone,   100/100
(100 %)
4 diff
(96.0 %id)
DA321934 hippocampus .s 1 to 577 2 to 578 exact tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
BG430017 Kidney .t-u 1 to 536 1 to 550 N44K V45F L46F Y47S F48Y ... tiling clone,   550/704
(78 %)
28 diff
(96.1 %id)
AW579505 head_neck .u-u 1 to 347 149 to 495 exact tiling clone,   347/495
(70 %)
6 diff
(98.8 %id)
DA454261 tongue, tumor tissue Gene ZC3H7A, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI