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Gene WSB1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
673 representative clones for gene WSB1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC308179 cerebellum .a 1 to 537 1 to 538   tiling clone,   538/538
(100 %)
2 diff
(99.7 %id)
DC342939 thalamus .a 37 to 600 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
DC338250 subthalamic nucleus .a 52 to 615 1 to 564       564/564
(100 %)
0 diff
(100 %id)
AL110243 brain .a 60 to 2141 1 to 2082 L16S available from DKFZ, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 2082/2082
(100 %)
1 diff
(100.0 %id)
DA509272 brain .a 60 to 629 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
NM_015626.8   .a 60 to 2892 1 to 2833 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2833/2833
(100 %)
1 diff
(100.0 %id)
DA100982 cerebellum .a 61 to 648 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA112655 cerebellum .a 61 to 645 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA243644 brain .a 61 to 638 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA248240 brain .a 61 to 649 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA249588 brain .a 61 to 635 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA301917 hippocampus .a 61 to 638 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA345884 substantia nigra .a 61 to 651 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA373117 thalamus .a 61 to 670 2 to 611   capped   610/610
(100 %)
0 diff
(100 %id)
DA381926 thalamus .a 61 to 626 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA644977   .a 61 to 634 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA935966 Spleen .a 61 to 667 2 to 608   capped   607/607
(100 %)
0 diff
(100 %id)
DA937412 Spleen .a 61 to 634 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB016729 esophageal, tumor tissue .a 61 to 631 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB224897 trachea .a 61 to 645 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA247539 brain .a 65 to 660 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA402888 thalamus .a 68 to 656 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA236235 brain .a 84 to 671 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA415321 thalamus .a 84 to 727 2 to 646   capped   645/648
(99 %)
2 diff
(99.7 %id)
TI_44167608   .a 88 to 767 122 to 801       680/801
(84 %)
8 diff
(99.1 %id)
TI_44168733   .a 88 to 793 91 to 798       708/799
(88 %)
13 diff
(98.4 %id)
TI_44170649   .a 88 to 769 81 to 762       682/763
(89 %)
7 diff
(99.1 %id)
TI_45208958   .a 88 to 788 88 to 788       701/788
(88 %)
9 diff
(98.9 %id)
TI_45211426   .a 88 to 852 126 to 890       765/921
(83 %)
18 diff
(98.1 %id)
DA190660 amygdala .a 89 to 678 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA337402 hippocampus .a 89 to 674 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA382813 thalamus .a 89 to 725 2 to 638   capped   637/637
(100 %)
0 diff
(100 %id)
DB147157 thymus .a 89 to 662 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB242976 stomach, tumor tissue .a 89 to 657 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB263734 uterus .a 89 to 675 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA191529 amygdala .a 90 to 681 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA224234 brain .a 90 to 743 2 to 656   capped   655/656
(99 %)
2 diff
(99.7 %id)
DA237083 brain .a 90 to 676 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA396717 thalamus .a 90 to 687 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA857235 placenta .a 90 to 663 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BM194111 leukopheresis .a 90 to 567 1 to 478       478/478
(100 %)
4 diff
(99.2 %id)
DA236999 brain .a 91 to 675 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA442119 tongue, tumor tissue .a 91 to 666 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
TI_45210740   .a 91 to 835 87 to 839       753/1016
(74 %)
24 diff
(97.7 %id)
TI_44345469   .a 91 to 810 88 to 808       721/808
(89 %)
16 diff
(98.1 %id)
DA377917 thalamus .a 92 to 717 2 to 627   capped   626/626
(100 %)
0 diff
(100 %id)
DA385942 thalamus .a 92 to 693 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA911024   .a 92 to 658 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BM151957 leukopheresis .a 92 to 531 1 to 440       440/440
(100 %)
2 diff
(99.6 %id)
DB159705 thymus .a 92 to 678 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA228028 brain .a 93 to 660 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA797484 brain .a 93 to 666 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BM151909 leukopheresis .a 93 to 491 1 to 399       399/399
(100 %)
2 diff
(99.5 %id)
BM152544 leukopheresis .a 93 to 654 1 to 563       563/564
(99 %)
10 diff
(98.3 %id)
AK074917   .a 94 to 2891 1 to 2797 L60P tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2797/2797
(100 %)
8 diff
(99.8 %id)
AK222576 coronary artery .a 94 to 2141 1 to 2048 L16S H255R AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 2048/2048
(100 %)
4 diff
(99.9 %id)
DA394000 thalamus .a 94 to 678 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB460846 testis .a 94 to 481 1 to 388       388/388
(100 %)
0 diff
(100 %id)
DB482530 hippocampus .a 94 to 586 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DB484682 hypothalamus .a 94 to 535 1 to 442       442/442
(100 %)
0 diff
(100 %id)
DB492071 hypothalamus .a 94 to 533 1 to 439       439/439
(100 %)
3 diff
(99.4 %id)
BJ995428 hepatoblastoma .a 94 to 535 1 to 442       442/442
(100 %)
0 diff
(100 %id)
DC381322 placenta .a 94 to 654 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DB155692 thymus .a 94 to 689 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DB172088 kidney, tumor tissue .a 94 to 672 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA014010 adrenal gland .a 95 to 661 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA021575   .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA022424   .a 95 to 672 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA028780   .a 95 to 666 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA029291   .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA094199 cerebellum .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA105489 cerebellum .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA110723 cerebellum .a 95 to 682 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA133954 alzheimer cortex .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA190416 amygdala .a 95 to 692 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA191492 amygdala .a 95 to 673 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA191659 amygdala .a 95 to 692 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA192682 amygdala .a 95 to 692 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA193732 amygdala .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA211062 brain .a 95 to 660 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA218859 brain .a 95 to 727 22 to 654   capped   633/633
(100 %)
0 diff
(100 %id)
DA219768 brain .a 95 to 664 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA223081 brain .a 95 to 674 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA224712 brain .a 95 to 749 2 to 656   capped   655/655
(100 %)
0 diff
(100 %id)
DA226345 brain .a 95 to 740 2 to 647   capped   646/650
(99 %)
1 diff
(99.9 %id)
DA232070 brain .a 95 to 665 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA233602 brain .a 95 to 701 2 to 608   capped   607/607
(100 %)
0 diff
(100 %id)
DA233707 brain .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA234670 brain .a 95 to 683 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA234996 brain .a 95 to 689 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA235207 brain .a 95 to 682 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA237047 brain .a 95 to 669 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA239858 brain .a 95 to 674 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA240534 brain .a 95 to 687 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA241283 brain .a 95 to 662 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA247302 brain .a 95 to 684 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA248046 brain .a 95 to 682 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA248169 brain .a 95 to 677 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA248729 brain .a 95 to 683 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA270273 caudate nucleus .a 95 to 666 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA284506 corpus callosum .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA287877 corpus callosum .a 95 to 659 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA295718 hippocampus .a 95 to 660 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA311129 hippocampus .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA318288 hippocampus .a 95 to 688 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA321226 hippocampus .a 95 to 666 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA331767 hippocampus .a 95 to 692 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA339918 hippocampus .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA339919 hippocampus .a 95 to 684 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA350328 substantia nigra .a 95 to 669 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA380575 thalamus .a 95 to 668 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA386299 thalamus .a 95 to 686 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA390919 thalamus .a 95 to 680 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA391246 thalamus .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA401570 thalamus .a 95 to 659 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA405635 thalamus .a 95 to 660 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA406070 thalamus .a 95 to 675 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA409095 thalamus .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA421259 cervix .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA422641 cervix .a 95 to 665 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA449138 tongue, tumor tissue .a 95 to 664 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA507680 brain .a 95 to 665 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA536636 heart .a 95 to 669 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB468115 hippocampus .a 95 to 525 1 to 431       431/431
(100 %)
2 diff
(99.6 %id)
DB495000 hypothalamus .a 95 to 587 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DB505568 hypothalamus .a 95 to 560 1 to 466       466/466
(100 %)
0 diff
(100 %id)
DA543279   .a 95 to 668 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA663768   .a 95 to 660 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA670653   .a 95 to 672 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA674403   .a 95 to 700 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
DA755838   .a 95 to 662 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA763610 tongue .a 95 to 670 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA808150 brain .a 95 to 661 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA808173 brain .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA846892 placenta .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA849693 placenta .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA851793 placenta .a 95 to 661 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA854032 placenta .a 95 to 664 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA858644 placenta .a 95 to 692 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA861550 placenta .a 95 to 664 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA861823 placenta .a 95 to 662 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA861971 placenta .a 95 to 678 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA863646 placenta .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA863688 placenta .a 95 to 666 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA921904 small intestine .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA923984 small intestine .a 95 to 660 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA944994 Spleen .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA947315 Spleen .a 95 to 672 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB013497 esophageal, tumor tissue .a 95 to 677 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB016275 esophageal, tumor tissue .a 95 to 661 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB078656 testis .a 95 to 664 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB108325 thymus .a 95 to 666 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB111097 thymus .a 95 to 663 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB148865 thymus .a 95 to 667 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB152800 thymus .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB157354 thymus .a 95 to 686 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DB157933 thymus .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB163241 thymus .a 95 to 677 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB165048 thymus .a 95 to 683 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB165462 thymus .a 95 to 683 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB165513 thymus .a 95 to 688 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB196509 trachea .a 95 to 670 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB199207 trachea .a 95 to 666 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB230080 trachea .a 95 to 689 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DB240309 trachea .a 95 to 678 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB240382 trachea .a 95 to 672 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB250713 uterus .a 95 to 688 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB253327 uterus .a 95 to 668 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB258207 uterus .a 95 to 669 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB292259 uterus .a 95 to 681 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA479401   .a 96 to 683 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA399818 thalamus .a 97 to 663 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB482484 hippocampus .a 104 to 598 1 to 495       495/495
(100 %)
0 diff
(100 %id)
AF069313   .a 111 to 2149 1 to 2039 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2039/2039
(100 %)
0 diff
(100 %id)
AF112205 hypothalamus .a 120 to 2141 1 to 2021 L16S AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 2021/2021
(100 %)
3 diff
(99.9 %id)
CN306295 embryonic stem cells, cell lines H1, H7, andH9 .a 124 to 842 1 to 720       720/720
(100 %)
2 diff
(99.8 %id)
TI_44350694   .a 129 to 839 90 to 803       714/803
(88 %)
13 diff
(98.4 %id)
CN306365 embryonic stem cells, cell lines H1, H7, andH9 .a 163 to 759 1 to 597       597/597
(100 %)
0 diff
(100 %id)
CN306331 embryonic stem cells, cell lines H1, H7, andH9 .a 165 to 828 1 to 664       664/664
(100 %)
0 diff
(100 %id)
DN990061 brain, whole brain .a 216 to 852 9 to 645       637/645
(98 %)
0 diff
(100 %id)
AF106683 Pituitary .a 240 to 2141 1 to 1899 F178L S231P AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 1899/1899
(100 %)
6 diff
(99.7 %id)
BF476521 Prostate .a 240 to 854 1 to 615     Submitted on the opposite strand 615/616
(99 %)
1 diff
(99.9 %id)
BG055133 Prostate .a 240 to 977 1 to 739     Submitted on the opposite strand 737/742
(99 %)
6 diff
(99.2 %id)
BG150302 pooled germ cell tumors .a 240 to 1008 1 to 769     Submitted on the opposite strand 769/769
(100 %)
2 diff
(99.8 %id)
AF072880   .a 285 to 2141 1 to 1856 exact     1856/1856
(100 %)
1 diff
(100.0 %id)
CN306314 embryonic stem cells, DMSO-treated H9 cellline .a 318 to 1062 1 to 745       745/746
(99 %)
1 diff
(99.9 %id)
DC317778 amygdala .a 330 to 911 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AA021547 eye, retina .a 345 to 707 1 to 364     Submitted on the opposite strand 364/365
(99 %)
2 diff
(99.5 %id)
EL735287 mixed .a 376 to 1195 1 to 820       820/820
(100 %)
0 diff
(100 %id)
TI_1948218649   .a 376 to 1260 126 to 1011       886/1361
(65 %)
32 diff
(97.7 %id)
TI_1948218875   .a 376 to 1189 131 to 952       822/1473
(55 %)
30 diff
(98.0 %id)
TI_1948219139   .a 376 to 986 131 to 743       613/1365
(44 %)
16 diff
(98.9 %id)
CO249269 Chondrosarcoma Lung Metastasis cell lines, lung .a 388 to 1088 1 to 697       697/840
(82 %)
11 diff
(98.7 %id)
BM728927 eye, fetal eye .a 409 to 1086 1 to 677       677/677
(100 %)
0 diff
(100 %id)
BJ990792 hepatoblastoma .a 539 to 1123 1 to 585       585/585
(100 %)
0 diff
(100 %id)
BM476888 leiomyosarcoma, uterus .a 648 to 1482 1 to 835       835/1068
(78 %)
15 diff
(98.6 %id)
TI_1948218877   .a 800 to 1640 972 to 124       848/1321
(64 %)
14 diff
(99.0 %id)
BU742948 eye, fetal eye .a 1512 to 2163 658 to 5       654/658
(99 %)
0 diff
(100 %id)
BJ995429 hepatoblastoma .a 1690 to 2113 424 to 1       424/424
(100 %)
0 diff
(100 %id)
BJ990793 hepatoblastoma .a 2143 to 2688 540 to 1   tiling clone,   540/540
(100 %)
5 diff
(99.1 %id)
NM_134265.2   .b 1 to 2395 1 to 2395 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2395/2395
(100 %)
1 diff
(100.0 %id)
DC322570 brain .b 24 to 587 1 to 564   tiling clone,   564/564
(100 %)
0 diff
(100 %id)
DA162425 amygdala .b 30 to 587 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA194893 amygdala .b 31 to 576 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA215791 brain .b 36 to 580 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA837171 placenta .b 36 to 584 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA983041 synovial membrane tissue from rheumatioidarthritis .b 36 to 587 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB092755 testis .b 36 to 584 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
AF240696   .b 52 to 1652 1 to 1601 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1601/1601
(100 %)
0 diff
(100 %id)
CN306336 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 53 to 579 12 to 538       527/538
(97 %)
8 diff
(98.6 %id)
AI434982 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 181 to 589 1 to 409     Submitted on the opposite strand 409/409
(100 %)
2 diff
(99.6 %id)
BF590278 pooled .b 267 to 743 1 to 476     Submitted on the opposite strand 476/485
(98 %)
2 diff
(99.6 %id)
TI_1948219373   .b 392 to 1143 882 to 126       757/1318
(57 %)
16 diff
(98.8 %id)
TI_1948219140   .b 398 to 1143 879 to 125       755/1324
(57 %)
16 diff
(98.8 %id)
AW881027 ovary .b 462 to 562 111 to 13       99/111
(89 %)
0 diff
(100 %id)
CN306285 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 474 to 1053 1 to 580       580/580
(100 %)
0 diff
(100 %id)
CX164923 human embryonic stem cells differentiated toan early endodermal cell type .b 480 to 1312 1 to 833       833/833
(100 %)
0 diff
(100 %id)
TI_1948218650   .b 488 to 1142 784 to 126       659/1270
(51 %)
36 diff
(97.2 %id)
TI_1948219141   .b 488 to 1143 790 to 128       663/1362
(48 %)
18 diff
(98.7 %id)
TI_1948218651   .b 525 to 1143 748 to 130       619/1377
(44 %)
7 diff
(99.5 %id)
BE968479 heart .b 582 to 1109 1 to 516   available from MGC,   516/755
(68 %)
19 diff
(97.5 %id)
TI_1948219372   .b 589 to 1143 679 to 123       557/1343
(41 %)
5 diff
(99.7 %id)
CN306312 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 600 to 1292 1 to 693       693/693
(100 %)
0 diff
(100 %id)
BG545666 lung .b 648 to 1382 1 to 736       736/738
(99 %)
10 diff
(98.7 %id)
BG992439 head_neck .b 673 to 779 1 to 106       106/106
(100 %)
8 diff
(92.5 %id)
TI_227714783   .b 762 to 1652 946 to 74   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 873/974
(89 %)
28 diff
(97.2 %id)
EL953861 eyeball .b 848 to 1339 43 to 528       486/528
(92 %)
17 diff
(96.8 %id)
CD518245 White Matter .b 864 to 1730 1 to 874   tiling clone,   874/896
(97 %)
9 diff
(99.0 %id)
BG704229 brain, hippocampus .c 1 to 801 6 to 810   tiling clone,   810/810
(100 %)
17 diff
(98.0 %id)
BM147613 leukopheresis .c 1 to 275 2 to 277   tiling clone,   277/277
(100 %)
6 diff
(97.9 %id)
DA244711 brain .c 9 to 595 2 to 588   tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
DB102778 thymus .c 30 to 570 2 to 542   capped   541/541
(100 %)
4 diff
(99.3 %id)
DA756919   .c 36 to 502 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
DB276558 uterus .c 36 to 562 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
AW149465 brain, medulloblastoma .c 181 to 939 1 to 756   tiling clone, Submitted on the opposite strand 756/757
(99 %)
14 diff
(98.2 %id)
BI089428 cervix .c 935 to 1709 1 to 777   tiling clone,   777/777
(100 %)
5 diff
(99.4 %id)
AK300262 placenta .d 1 to 1537 1 to 1537 exact tiling clone,   1537/1537
(100 %)
0 diff
(100 %id)
DC418199 trachea .d 496 to 1059 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC296597 synovial membrane tissue from rheumatioidarthritis .d 516 to 1073 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC423264 uterus .d 619 to 1171 1 to 553       553/553
(100 %)
0 diff
(100 %id)
CN306311 embryonic stem cells, cell lines H1, H7, andH9 .d 719 to 1427 1 to 709       709/709
(100 %)
1 diff
(99.9 %id)
CN306356 embryonic stem cells, DMSO-treated H9 cellline .d 847 to 1320 1 to 474       474/474
(100 %)
0 diff
(100 %id)
CN306353 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 861 to 1224 1 to 364       364/364
(100 %)
0 diff
(100 %id)
DC315453 amygdala .d 890 to 1459 1 to 569       569/569
(100 %)
4 diff
(99.3 %id)
L31968   .d 1002 to 1391 396 to 1       396/398
(99 %)
19 diff
(95.3 %id)
BG111743 Bone, osteosarcoma, cell line .d 1004 to 1699 1 to 688       688/689
(99 %)
30 diff
(95.7 %id)
AA347583 heart .d 1040 to 1312 1 to 273       273/273
(100 %)
0 diff
(100 %id)
AW961722   .d 1041 to 1563 1 to 523       523/523
(100 %)
5 diff
(99.1 %id)
CN306318 embryonic stem cells, DMSO-treated H9 cellline .d 1090 to 1814 9 to 733       725/733
(98 %)
6 diff
(99.2 %id)
AI681653 carcinoid, lung .d 1239 to 1664 1 to 426     Submitted on the opposite strand 426/429
(99 %)
1 diff
(99.8 %id)
DB448318 testis .d 1328 to 1750 1 to 428       428/428
(100 %)
15 diff
(96.5 %id)
BM998843 lung, Lung Focal Fibrosis .d 1344 to 2031 14 to 700     Submitted on the opposite strand 687/700
(98 %)
1 diff
(99.9 %id)
AL698818 human skeletal muscle .d 1390 to 1665 1 to 276       276/276
(100 %)
0 diff
(100 %id)
DB136600 thymus .d 1407 to 1948 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
CN306320 embryonic stem cells, cell lines H1, H7, andH9 .d 1428 to 2034 1 to 607   tiling clone,   607/607
(100 %)
4 diff
(99.4 %id)
DA853791 placenta .d 1461 to 2026 2 to 567   capped   566/567
(99 %)
3 diff
(99.5 %id)
AW578936 colon .d 1549 to 2100 24 to 575       552/575
(96 %)
6 diff
(99.0 %id)
BQ271382 Pancreas, Purified pancreatic islet .d 1569 to 2176 8 to 615       608/615
(98 %)
6 diff
(99.1 %id)
CK825489 Pancreas, Purified pancreatic islet .d 1612 to 2212 1 to 601     Submitted on the opposite strand 601/601
(100 %)
0 diff
(100 %id)
DA269972 caudate nucleus .d 1629 to 2196 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BY798170 eye .d 1686 to 2286 1 to 601       601/601
(100 %)
0 diff
(100 %id)
BQ271090 Pancreas, Purified pancreatic islet .d 1738 to 2317 580 to 1   tiling clone,   580/580
(100 %)
3 diff
(99.5 %id)
BP325859 prostata .d 1738 to 2301 1 to 564   tiling clone,   564/564
(100 %)
0 diff
(100 %id)
AA005371 liver and spleen .d 1761 to 2142 1 to 388       388/404
(96 %)
9 diff
(97.8 %id)
AW578947 colon .d 1785 to 2100 1 to 316       316/316
(100 %)
6 diff
(98.2 %id)
AL110269 brain .e 1 to 4154 5 to 4157 N149S E171G K201R tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 4154/4154
(100 %)
17 diff
(99.6 %id)
BC048007.
matches multiple genes
testis .e 1 to 4154 1 to 4154 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base), also hits gene DUSP15 4154/4155
(99 %)
2 diff
(100.0 %id)
CN306319 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 271 to 1021 1 to 751 S3A P6R R7G V8S N9T ...     751/751
(100 %)
4 diff
(99.5 %id)
DA027576   .e 475 to 1054 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
CX752241 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 476 to 1234 1 to 747     Submitted on the opposite strand 747/779
(95 %)
19 diff
(97.6 %id)
BQ718448 sympathetic trunk .e 489 to 1365 1 to 881       881/885
(99 %)
22 diff
(97.6 %id)
DB173063 kidney, tumor tissue .e 526 to 1117 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
EB388313 eye, optic nerve .e 549 to 1136 10 to 597       588/597
(98 %)
8 diff
(98.7 %id)
DA180501 amygdala .e 575 to 1134 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DC424664 placenta .e 667 to 1415 1 to 756       756/760
(99 %)
13 diff
(98.3 %id)
DA304136 hippocampus .e 668 to 1214 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DB472424 hippocampus .e 671 to 1160 1 to 490       490/490
(100 %)
0 diff
(100 %id)
CN306338 embryonic stem cells, cell lines H1, H7, andH9 .e 705 to 1304 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
W17360 lung .e 708 to 1236 520 to 1     Submitted on the opposite strand 522/523
(99 %)
9 diff
(98.3 %id)
BE699661 nervous_normal .e 759 to 1097 352 to 14       339/363
(93 %)
0 diff
(100 %id)
CN306364 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 805 to 1445 1 to 641       641/641
(100 %)
1 diff
(99.9 %id)
BF967285 brain, hypothalamus .e 818 to 1584 1 to 755       755/1093
(69 %)
40 diff
(96.4 %id)
BG713957 brain, hypothalamus .e 818 to 1579 1 to 773       773/774
(99 %)
23 diff
(97.1 %id)
DB485829 hypothalamus .e 823 to 1195 1 to 372       372/373
(99 %)
14 diff
(96.3 %id)
DB496804 hypothalamus .e 823 to 1305 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
DB501621 hypothalamus .e 823 to 1293 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
CA772549 Pancreas, Purified pancreatic islet .e 826 to 1158 10 to 342   fully sequenced,   333/342
(97 %)
6 diff
(98.3 %id)
BM670968 eye, lens .e 830 to 1248 435 to 17       419/443
(94 %)
4 diff
(99.1 %id)
AV646487 corresponding non cancerous liver tissue .e 875 to 1218 1 to 344     Submitted on the opposite strand 344/373
(92 %)
15 diff
(96.0 %id)
N35846 melanocyte .e 879 to 1124 1 to 247   fully sequenced,   247/247
(100 %)
0 diff
(100 %id)
AF147442   .e 879 to 1459 1 to 581       581/581
(100 %)
0 diff
(100 %id)
N42589 melanocyte .e 879 to 1205 1 to 327       327/327
(100 %)
0 diff
(100 %id)
BQ631530 Pancreas, Purified pancreatic islet .e 886 to 1412 1 to 527   fully sequenced,   527/527
(100 %)
1 diff
(99.9 %id)
AA035799 heart .e 892 to 1236 362 to 15     Submitted on the opposite strand 348/372
(93 %)
3 diff
(99.2 %id)
AI791441 breast .e 892 to 1456 565 to 1     Submitted on the opposite strand 565/565
(100 %)
1 diff
(99.9 %id)
DB317610.
matches multiple genes
brain .e 893 to 1457 566 to 1     also hits gene DNAJC13 566/566
(100 %)
1 diff
(99.9 %id)
BF351733 head_neck .e 909 to 1095 238 to 52       187/241
(77 %)
0 diff
(100 %id)
DA291060 hippocampus .e 938 to 1521 2 to 588   capped   587/587
(100 %)
3 diff
(99.5 %id)
AA211165   .e 988 to 1445 1 to 465       465/465
(100 %)
15 diff
(96.8 %id)
AI023685 liver and spleen .e 1003 to 1457 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
CN306360 embryonic stem cells, cell lines H1, H7, andH9 .e 1005 to 1457 1 to 453       453/453
(100 %)
3 diff
(99.4 %id)
T49979 placenta .e 1020 to 1358 1 to 347       347/347
(100 %)
9 diff
(97.5 %id)
DB561366 hypothalamus .e 1025 to 1455 1 to 432     Submitted on the opposite strand 432/432
(100 %)
3 diff
(99.4 %id)
DB535298 hippocampus .e 1026 to 1455 1 to 430     Submitted on the opposite strand 430/430
(100 %)
3 diff
(99.4 %id)
N31577 melanocyte .e 1037 to 1457 423 to 1       423/423
(100 %)
2 diff
(99.6 %id)
AI672496 Kidney .e 1039 to 1457 419 to 1       419/419
(100 %)
0 diff
(100 %id)
AI192028   .e 1057 to 1460 404 to 1       404/404
(100 %)
2 diff
(99.6 %id)
N24643 melanocyte .e 1094 to 1457 363 to 1   fully sequenced,   363/363
(100 %)
0 diff
(100 %id)
BM193452 leukopheresis .e 1106 to 1457 1 to 352   AAA   352/352
(100 %)
9 diff
(97.5 %id)
AA292012 ovarian tumor, ovary .e 1111 to 1537 1 to 425       425/425
(100 %)
6 diff
(98.6 %id)
AA693918 liver and spleen .e 1116 to 1455 340 to 1       340/340
(100 %)
0 diff
(100 %id)
DB204853 trachea .e 1120 to 1683 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CA771715 Pancreas, Purified pancreatic islet .e 1128 to 1456 329 to 1   fully sequenced,   329/329
(100 %)
0 diff
(100 %id)
AV750192 Pituitary .e 1132 to 1408 1 to 273       273/281
(97 %)
7 diff
(97.6 %id)
AA694168 liver and spleen .e 1139 to 1455 317 to 1       317/317
(100 %)
0 diff
(100 %id)
DB239009 trachea .e 1141 to 1718 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
AI247454 liver and spleen .e 1170 to 1455 286 to 1       286/286
(100 %)
0 diff
(100 %id)
DA547154   .e 1175 to 1736 12 to 573   capped   562/572
(98 %)
8 diff
(98.7 %id)
BE244730 leukopheresis .e 1182 to 1599 1 to 417       417/417
(100 %)
2 diff
(99.6 %id)
BM152942 leukopheresis .e 1182 to 1649 1 to 467       467/467
(100 %)
9 diff
(98.1 %id)
BM193470 leukopheresis .e 1182 to 1658 1 to 476       476/477
(99 %)
2 diff
(99.6 %id)
BU149680 dorsal root ganglia .e 1187 to 1999 818 to 5     Submitted on the opposite strand 814/889
(91 %)
0 diff
(100 %id)
AW955995   .e 1188 to 1456 269 to 1     Submitted on the opposite strand 269/439
(61 %)
3 diff
(99.4 %id)
CN306313 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1205 to 1748 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
DA150568 amygdala .e 1210 to 1790 2 to 581   capped   580/580
(100 %)
4 diff
(99.4 %id)
AA746043 Kidney .e 1213 to 1599 1 to 387     Submitted on the opposite strand 387/387
(100 %)
1 diff
(99.8 %id)
AI291116 carcinoid, lung .e 1215 to 1684 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
AI689962 carcinoid, lung .e 1215 to 1668 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
BE467491 carcinoid, lung .e 1215 to 1691 1 to 477     Submitted on the opposite strand 477/477
(100 %)
0 diff
(100 %id)
AA373253 lung .e 1216 to 1362 149 to 1     Submitted on the opposite strand 149/150
(99 %)
4 diff
(97.4 %id)
H43538 breast .e 1221 to 1457 237 to 1     Submitted on the opposite strand 237/237
(100 %)
0 diff
(100 %id)
W56722 heart .e 1221 to 1456 243 to 1     Submitted on the opposite strand 243/243
(100 %)
8 diff
(96.8 %id)
AA054236 eye, retina .e 1221 to 1655 1 to 437     Submitted on the opposite strand 437/437
(100 %)
3 diff
(99.4 %id)
AI214925 carcinoid, lung .e 1225 to 1586 1 to 363     Submitted on the opposite strand 363/363
(100 %)
3 diff
(99.2 %id)
W69979 heart .e 1229 to 1455 227 to 1     Submitted on the opposite strand 227/227
(100 %)
0 diff
(100 %id)
DA148726 amygdala .e 1267 to 1825 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
BQ574288 Chondrosarcoma Grade II, Left Pelvis .e 1294 to 1981 702 to 19   AAA   684/684
(100 %)
4 diff
(99.5 %id)
CA449846 Chondrosarcoma, Left Pelvis .e 1307 to 2072 778 to 17   AAA   762/765
(99 %)
6 diff
(99.3 %id)
DA830360 placenta .e 1317 to 1997 2 to 684   capped   683/730
(93 %)
15 diff
(98.0 %id)
DA263710 caudate nucleus .e 1321 to 1852 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
AL600241   .e 1330 to 1834 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
AL600242   .e 1330 to 1778 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
CB963727 Blood vessels - aorta, basilar and artery .e 1348 to 2093 1 to 748       748/751
(99 %)
11 diff
(98.6 %id)
BQ721157 sympathetic trunk .e 1369 to 2307 1 to 941       941/973
(96 %)
15 diff
(98.5 %id)
BQ631254 Pancreas, Purified pancreatic islet .e 1389 to 1981 593 to 1   fully sequenced,   593/593
(100 %)
0 diff
(100 %id)
BF111821 pooled .e 1405 to 1980 575 to 1       575/575
(100 %)
4 diff
(99.4 %id)
AI692592 carcinoid, lung .e 1428 to 1980 553 to 1       553/553
(100 %)
2 diff
(99.7 %id)
DB114183 thymus .e 1446 to 1999 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
AW188329 pooled .e 1470 to 1981 512 to 1       512/512
(100 %)
0 diff
(100 %id)
AI741166 pooled .e 1474 to 1980 507 to 1       507/507
(100 %)
0 diff
(100 %id)
AI681771 carcinoid, lung .e 1475 to 1980 507 to 1       507/507
(100 %)
1 diff
(99.9 %id)
AI435481 pooled .e 1477 to 1980 504 to 1       504/504
(100 %)
0 diff
(100 %id)
BE932957 head_neck .e 1502 to 1730 226 to 3       224/228
(98 %)
0 diff
(100 %id)
CN306315 embryonic stem cells, DMSO-treated H9 cellline .e 1526 to 2051 1 to 526       526/526
(100 %)
3 diff
(99.5 %id)
BG482888 lung .e 1538 to 2258 1 to 704       704/705
(99 %)
25 diff
(96.5 %id)
CD511536 Blood vessels - aorta, basilar and artery .e 1538 to 2271 1 to 741       741/746
(99 %)
9 diff
(98.8 %id)
DB139982 thymus .e 1538 to 2094 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
CN306335 embryonic stem cells, cell lines H1, H7, andH9 .e 1563 to 2189 1 to 627       627/627
(100 %)
0 diff
(100 %id)
DA273887 corpus callosum .e 1570 to 2127 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
AA828642 ovary .e 1571 to 1894 344 to 21       324/344
(94 %)
0 diff
(100 %id)
BG113983 Bone, osteosarcoma, cell line .e 1576 to 2244 1 to 673       673/942
(71 %)
15 diff
(98.5 %id)
BF438768 pooled .e 1600 to 1980 381 to 1       381/381
(100 %)
3 diff
(99.3 %id)
AW086009 esophagus, squamous cell carcinoma .e 1606 to 1980 376 to 1       376/376
(100 %)
1 diff
(99.8 %id)
AI445944 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 1607 to 1981 375 to 1       375/375
(100 %)
0 diff
(100 %id)
AI472875 pooled .e 1616 to 1978 365 to 3       363/365
(99 %)
0 diff
(100 %id)
AL702944 human skeletal muscle .e 1620 to 2350 1 to 731       731/731
(100 %)
0 diff
(100 %id)
AI061215   .e 1620 to 1981 362 to 1       362/362
(100 %)
0 diff
(100 %id)
AA293292 ovarian tumor, ovary .e 1629 to 1980 352 to 1       352/352
(100 %)
0 diff
(100 %id)
DB213898 trachea .e 1630 to 2190 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
AW129027 brain, tumor, 5 pooled (see description) .e 1633 to 1985 353 to 1       353/353
(100 %)
0 diff
(100 %id)
AI002673   .e 1642 to 1981 340 to 1       340/340
(100 %)
1 diff
(99.8 %id)
CN306281 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1663 to 2080 1 to 418       418/418
(100 %)
0 diff
(100 %id)
CN306302 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1664 to 2273 1 to 610       610/610
(100 %)
0 diff
(100 %id)
CA407161 adipose .e 1687 to 1921 1 to 235       235/235
(100 %)
2 diff
(99.2 %id)
AW044039 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 1697 to 1981 285 to 1       285/285
(100 %)
1 diff
(99.7 %id)
AI537299 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 1701 to 1981 281 to 1       281/281
(100 %)
0 diff
(100 %id)
BP292870 lung .e 1750 to 2329 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP293119 lung .e 1750 to 2330 1 to 581       581/582
(99 %)
1 diff
(99.9 %id)
DA133790 alzheimer cortex .e 1764 to 2317 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BF527007 brain, glioblastoma with EGFR amplification .e 1766 to 2481 1 to 711       711/906
(78 %)
16 diff
(98.3 %id)
AW149460 brain, medulloblastoma .e 1771 to 2440 21 to 691     Submitted on the opposite strand 671/783
(85 %)
19 diff
(97.6 %id)
AF106684 Pituitary .e 1774 to 3404 1 to 1631   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 1631/1631
(100 %)
0 diff
(100 %id)
AA444373   .e 1774 to 2231 1 to 458       458/458
(100 %)
2 diff
(99.6 %id)
AA011043 eye, retina .e 1776 to 2128 1 to 359       359/370
(97 %)
5 diff
(98.7 %id)
AA018725 eye, retina .e 1776 to 2248 1 to 477       477/478
(99 %)
8 diff
(98.4 %id)
AA044959 eye, retina .e 1776 to 2195 1 to 427       427/433
(98 %)
8 diff
(98.2 %id)
AW867095 stomach_normal .e 1808 to 2444 633 to 1       633/705
(89 %)
30 diff
(95.8 %id)
BI831008 brain, medulla .e 1819 to 2548 1 to 725       725/725
(100 %)
13 diff
(98.3 %id)
TI_57177236   .e 1820 to 2548 93 to 816       724/816
(88 %)
8 diff
(99.1 %id)
BM352455 Pancreas, Purified pancreatic islet .e 1821 to 2454 11 to 644       634/644
(98 %)
6 diff
(99.1 %id)
DA239328 brain .e 1825 to 2404 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BP289622 lung .e 1826 to 2407 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CN306323 embryonic stem cells, cell lines H1, H7, andH9 .e 1834 to 2482 1 to 649       649/649
(100 %)
1 diff
(99.9 %id)
BG483844 lung .e 1835 to 2491 1 to 661       661/662
(99 %)
6 diff
(99.1 %id)
BG539904 lung .e 1835 to 2455 1 to 639       639/893
(71 %)
10 diff
(98.9 %id)
BG547684 lung .e 1835 to 2489 1 to 651       651/651
(100 %)
10 diff
(98.5 %id)
BX502992 Liver .e 1848 to 2261 1 to 413       413/413
(100 %)
9 diff
(97.9 %id)
BG025823 lymph, lymphoma, cell line .e 1850 to 2416 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
BM151481 leukopheresis .e 1879 to 2470 591 to 1       591/591
(100 %)
7 diff
(98.9 %id)
BG681421 skin, squamous cell carcinoma .e 1902 to 2749 1 to 839       839/985
(85 %)
23 diff
(97.7 %id)
DB160555 thymus .e 1913 to 2512 2 to 602   capped   601/601
(100 %)
1 diff
(99.9 %id)
BX472120   .e 1917 to 2416 1 to 501       501/501
(100 %)
3 diff
(99.5 %id)
BX642149   .e 1938 to 2412 1 to 489       489/489
(100 %)
17 diff
(96.6 %id)
BG620393 placenta .e 1950 to 2745 1 to 801       695/804
(86 %)
24 diff
(97.1 %id)
BG818201 anaplastic oligodendroglioma with 1p/19qloss, brain .e 1954 to 2632 1 to 681       681/727
(93 %)
12 diff
(98.4 %id)
DA186479 amygdala .e 1955 to 2522 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
AA448999   .e 1961 to 2326 1 to 366       366/366
(100 %)
0 diff
(100 %id)
BE243738 leukopheresis .e 1982 to 2470 489 to 1       489/492
(99 %)
0 diff
(100 %id)
CN306352 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1990 to 2705 8 to 724       717/717
(100 %)
5 diff
(99.4 %id)
CN306307 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1992 to 2670 1 to 680       680/680
(100 %)
3 diff
(99.6 %id)
BM144770 leukopheresis .e 1992 to 2470 479 to 1       479/479
(100 %)
1 diff
(99.8 %id)
BE245674 leukopheresis .e 2004 to 2470 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
CD250847 Blood vessels - aorta, basilar and artery .e 2019 to 2623 1 to 613       613/759
(80 %)
20 diff
(97.4 %id)
AA363049 ovary .e 2033 to 2399 9 to 379       371/384
(96 %)
12 diff
(96.9 %id)
AA092782   .e 2037 to 2297 1 to 255       255/261
(97 %)
17 diff
(93.5 %id)
BY796601 eye .e 2044 to 2602 25 to 583       559/583
(95 %)
6 diff
(99.0 %id)
AA330250   .e 2046 to 2286 1 to 241       241/241
(100 %)
0 diff
(100 %id)
CN306339 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 2079 to 2752 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
CN306298 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 2087 to 2697 1 to 611       611/611
(100 %)
2 diff
(99.7 %id)
BU853941 testis .e 2089 to 2636 1 to 549       549/747
(73 %)
6 diff
(99.2 %id)
AA347582 heart .e 2110 to 2470 361 to 1       361/361
(100 %)
0 diff
(100 %id)
DA341075 substantia nigra .e 2119 to 2670 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
CB151020 cervix, Uterine .e 2132 to 2775 1 to 644       644/644
(100 %)
3 diff
(99.6 %id)
CN306341 embryonic stem cells, cell lines H1, H7, andH9 .e 2132 to 2836 1 to 705       705/705
(100 %)
2 diff
(99.8 %id)
CN306324 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 2142 to 2791 1 to 651       651/651
(100 %)
3 diff
(99.6 %id)
CN306337 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 2155 to 2685 18 to 549       532/549
(96 %)
6 diff
(99.0 %id)
DA890189 rectum .e 2156 to 2724 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CX783783 human embryonic stem cells .e 2180 to 2915 1 to 736       736/736
(100 %)
0 diff
(100 %id)
BM146059 leukopheresis .e 2197 to 2470 274 to 1       274/280
(97 %)
8 diff
(97.2 %id)
DA549720   .e 2200 to 2759 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BF692841 muscle (skeletal) .e 2295 to 2997 1 to 679       679/842
(80 %)
52 diff
(93.9 %id)
BE967467 brain .e 2302 to 2885 1 to 577       577/580
(99 %)
11 diff
(98.2 %id)
R97812 liver and spleen .e 2304 to 2629 1 to 331     Submitted on the opposite strand 331/387
(85 %)
6 diff
(98.5 %id)
N52977 liver and spleen .e 2304 to 2753 1 to 453     Submitted on the opposite strand 453/453
(100 %)
8 diff
(98.3 %id)
N57723 liver and spleen .e 2304 to 2713 1 to 411     Submitted on the opposite strand 411/411
(100 %)
1 diff
(99.8 %id)
N53236 liver and spleen .e 2304 to 2626 1 to 325     Submitted on the opposite strand 325/329
(98 %)
9 diff
(97.3 %id)
AA004838 liver and spleen .e 2304 to 2885 1 to 583     Submitted on the opposite strand 583/585
(99 %)
10 diff
(98.3 %id)
H56093 liver and spleen .e 2307 to 2636 1 to 330     Submitted on the opposite strand 330/398
(82 %)
1 diff
(99.8 %id)
BX418867 brain, fetal brain .e 2315 to 3286 8 to 974       967/974
(99 %)
25 diff
(97.5 %id)
BF837466 head_neck .e 2319 to 2486 171 to 3     Submitted on the opposite strand 169/181
(93 %)
0 diff
(100 %id)
CN306366 embryonic stem cells, DMSO-treated H9 cellline .e 2320 to 2532 1 to 213       213/218
(97 %)
6 diff
(97.3 %id)
BC005226 heart .e 2321 to 3882 1 to 1570   available from MGC, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 1570/1570
(100 %)
5 diff
(99.7 %id)
R97527 liver and spleen .e 2344 to 2549 1 to 206     Submitted on the opposite strand 206/206
(100 %)
0 diff
(100 %id)
BF967830 brain, hypothalamus .e 2762 to 3363 634 to 29       606/634
(95 %)
0 diff
(100 %id)
BM352134 Pancreas, Purified pancreatic islet .e 2798 to 3411 614 to 1       614/615
(99 %)
0 diff
(100 %id)
AW887567 ovary .e 2822 to 2974 26 to 179       154/179
(86 %)
6 diff
(96.7 %id)
CN306288 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 2824 to 3471 1 to 648       648/649
(99 %)
5 diff
(99.3 %id)
EL950264 eyeball .e 2875 to 3395 8 to 528       521/528
(98 %)
9 diff
(98.3 %id)
DC427436 placenta .e 2894 to 3404 510 to 1       510/510
(100 %)
17 diff
(96.7 %id)
FN149519 breast carcinoma .e 2914 to 3032 119 to 1     Submitted on the opposite strand 119/119
(100 %)
0 diff
(100 %id)
DB551392 hippocampus .e 2914 to 3412 1 to 499     Submitted on the opposite strand 499/499
(100 %)
1 diff
(99.8 %id)
DB551348 hippocampus .e 2930 to 3412 1 to 483     Submitted on the opposite strand 483/483
(100 %)
0 diff
(100 %id)
DB567826 hypothalamus .e 2950 to 3412 1 to 463     Submitted on the opposite strand 463/463
(100 %)
1 diff
(99.8 %id)
DB572821 hypothalamus .e 2967 to 3412 1 to 446     Submitted on the opposite strand 446/446
(100 %)
2 diff
(99.6 %id)
GD150900   .e 2979 to 3215 238 to 1     Submitted on the opposite strand 238/242
(98 %)
13 diff
(94.7 %id)
DB553694 hypothalamus .e 2979 to 3412 1 to 434     Submitted on the opposite strand 434/434
(100 %)
2 diff
(99.6 %id)
DB563003 hypothalamus .e 3002 to 3412 1 to 411     Submitted on the opposite strand 411/411
(100 %)
0 diff
(100 %id)
N59690 liver and spleen .e 3013 to 3322 311 to 1     Submitted on the opposite strand 311/311
(100 %)
2 diff
(99.4 %id)
R97862 liver and spleen .e 3055 to 3412 361 to 1     Submitted on the opposite strand 361/361
(100 %)
4 diff
(98.9 %id)
H56295 liver and spleen .e 3072 to 3412 343 to 2     Submitted on the opposite strand 342/343
(99 %)
0 diff
(100 %id)
FN048690 breast carcinoma .e 3083 to 3188 1 to 106       106/107
(99 %)
1 diff
(99.1 %id)
T49980 placenta .e 3089 to 3408 326 to 3       324/326
(99 %)
0 diff
(100 %id)
N58635 liver and spleen .e 3104 to 3346 282 to 39     Submitted on the opposite strand 244/282
(86 %)
0 diff
(100 %id)
AA021659 eye, retina .e 3115 to 3405 291 to 1     Submitted on the opposite strand 291/291
(100 %)
0 diff
(100 %id)
FN063239 breast carcinoma .e 3129 to 3228 1 to 100       100/100
(100 %)
0 diff
(100 %id)
AA004961 liver and spleen .e 3175 to 3366 193 to 1     Submitted on the opposite strand 193/194
(99 %)
1 diff
(99.5 %id)
BM706002 eye, lens .e 3182 to 3576 1 to 396     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 396/396
(100 %)
3 diff
(99.3 %id)
AI128018 uterus .e 3185 to 3559 9 to 384     Submitted on the opposite strand 376/384
(97 %)
6 diff
(98.5 %id)
BM983713 lung, Primary Lung Epithelial Cells .e 3185 to 3806 6 to 628     Submitted on the opposite strand 623/628
(99 %)
6 diff
(99.1 %id)
BX454904 brain, fetal brain .e 3314 to 4151 843 to 1       843/923
(91 %)
33 diff
(96.5 %id)
BP422333 small intestine .e 3341 to 3641 1 to 301     Submitted on the opposite strand 301/301
(100 %)
0 diff
(100 %id)
BX642150   .e 3453 to 3882 433 to 1       433/433
(100 %)
2 diff
(99.6 %id)
BI002013 head_normal .e 3471 to 3734 267 to 5       263/322
(81 %)
0 diff
(100 %id)
TI_157612729   .e 3483 to 3973 576 to 74   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 503/547
(91 %)
38 diff
(93.1 %id)
DB541180 hippocampus .e 3510 to 3973 1 to 464     Submitted on the opposite strand 464/464
(100 %)
1 diff
(99.8 %id)
AA011009 eye, retina .e 3534 to 3974 442 to 1       442/443
(99 %)
3 diff
(99.4 %id)
TI_149309272   .e 3537 to 4173 706 to 67       640/1067
(59 %)
0 diff
(100 %id)
ES315597 occipital scalp hair, skin .e 3562 to 3700 1 to 139       139/139
(100 %)
1 diff
(99.3 %id)
DR155549 human embryonic stem cells differentiated toan early endodermal cell type .e 3568 to 4154 601 to 15   AAA Submitted on the opposite strand 587/587
(100 %)
4 diff
(99.4 %id)
AA211166   .e 3572 to 3973 416 to 1       416/426
(97 %)
17 diff
(96.1 %id)
TI_149271761   .e 3580 to 3973 486 to 92   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 395/635
(62 %)
1 diff
(99.9 %id)
BM668924 eye, lens .e 3591 to 4154 582 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 564/564
(100 %)
0 diff
(100 %id)
BQ632434 Pancreas, Purified pancreatic islet .e 3597 to 4153 557 to 1       557/557
(100 %)
0 diff
(100 %id)
AA018629 eye, retina .e 3607 to 3972 369 to 1       369/370
(99 %)
3 diff
(99.2 %id)
TI_149274380   .e 3672 to 4154 579 to 98   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 482/974
(49 %)
7 diff
(99.3 %id)
DB576848 hypothalamus .e 3683 to 4163 1 to 480     Submitted on the opposite strand 480/481
(99 %)
2 diff
(99.6 %id)
DB566043 hypothalamus .e 3704 to 4163 1 to 460     Submitted on the opposite strand 460/461
(99 %)
4 diff
(99.2 %id)
DB526245 testis .e 3721 to 4153 1 to 432     Submitted on the opposite strand 432/433
(99 %)
3 diff
(99.4 %id)
BE244531 leukopheresis .e 3725 to 4154 432 to 1       432/432
(100 %)
4 diff
(99.1 %id)
BI491434 cochlea, ear .e 3728 to 3875 150 to 3       148/154
(96 %)
0 diff
(100 %id)
BM150977 leukopheresis .e 3730 to 4154 441 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 426/426
(100 %)
4 diff
(99.1 %id)
AA449464   .e 3737 to 3978 241 to 1       241/241
(100 %)
2 diff
(99.2 %id)
BM151118 leukopheresis .e 3758 to 4166 412 to 3       410/413
(99 %)
0 diff
(100 %id)
TI_149279737   .e 3789 to 4154 452 to 82   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 371/1124
(33 %)
8 diff
(99.3 %id)
TI_159714779   .e 3789 to 4154 445 to 79   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 367/1048
(35 %)
1 diff
(100.0 %id)
TI_159723410   .e 3789 to 4154 452 to 86   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 367/958
(38 %)
2 diff
(99.8 %id)
TI_159723562   .e 3789 to 4154 461 to 95   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 367/993
(36 %)
2 diff
(99.8 %id)
FN136661 breast carcinoma .e 3808 to 3911 104 to 1     Submitted on the opposite strand 104/109
(95 %)
0 diff
(100 %id)
FN141894 breast carcinoma .e 3809 to 3921 109 to 1     Submitted on the opposite strand 109/111
(98 %)
3 diff
(97.3 %id)
BE762423 denis_drash .e 3811 to 3915 105 to 2       104/105
(99 %)
0 diff
(100 %id)
FN166816 breast carcinoma .e 3814 to 3927 112 to 1     Submitted on the opposite strand 112/112
(100 %)
4 diff
(96.5 %id)
FN126824 breast carcinoma .e 3827 to 3949 122 to 1     Submitted on the opposite strand 122/122
(100 %)
1 diff
(99.2 %id)
FN167463 breast carcinoma .e 3836 to 3958 124 to 2     Submitted on the opposite strand 123/124
(99 %)
0 diff
(100 %id)
FN101355 breast carcinoma .e 3840 to 3947 106 to 4     Submitted on the opposite strand 103/117
(88 %)
0 diff
(100 %id)
FN137377 breast carcinoma .e 3849 to 3979 132 to 1     Submitted on the opposite strand 132/132
(100 %)
1 diff
(99.3 %id)
FN150378 breast carcinoma .e 3849 to 3975 123 to 1     Submitted on the opposite strand 123/123
(100 %)
4 diff
(96.8 %id)
AL047796 uterus .e 3853 to 4433 1 to 581   tiling clone,   581/581
(100 %)
0 diff
(100 %id)
FN057631 breast carcinoma .e 3855 to 3973 1 to 121       121/123
(98 %)
3 diff
(97.6 %id)
FN049816 breast carcinoma .e 3893 to 3973 1 to 81       81/81
(100 %)
0 diff
(100 %id)
FN146426 breast carcinoma .e 3985 to 4072 1 to 88       88/90
(97 %)
5 diff
(94.5 %id)
FN161320 breast carcinoma .e 3987 to 4079 1 to 91       91/91
(100 %)
3 diff
(96.8 %id)
FN130550 breast carcinoma .e 3990 to 4082 1 to 93       93/93
(100 %)
3 diff
(96.8 %id)
FN076730 breast carcinoma .e 3991 to 4072 81 to 1     Submitted on the opposite strand 81/81
(100 %)
1 diff
(98.8 %id)
FN080750 breast carcinoma .e 3992 to 4059 1 to 68       68/73
(93 %)
2 diff
(97.3 %id)
FN061322 breast carcinoma .e 3994 to 4089 1 to 96       96/96
(100 %)
0 diff
(100 %id)
FN139698 breast carcinoma .e 3995 to 4089 95 to 1     Submitted on the opposite strand 95/95
(100 %)
0 diff
(100 %id)
FN056905 breast carcinoma .e 4008 to 4098 1 to 91       91/91
(100 %)
0 diff
(100 %id)
FN125800 breast carcinoma .e 4008 to 4098 1 to 93       93/93
(100 %)
2 diff
(97.9 %id)
FN165724 breast carcinoma .e 4020 to 4112 1 to 93       93/93
(100 %)
0 diff
(100 %id)
FN164209 breast carcinoma .e 4025 to 4119 96 to 1     Submitted on the opposite strand 96/96
(100 %)
1 diff
(99.0 %id)
FN073808 breast carcinoma .e 4032 to 4116 1 to 83       83/84
(98 %)
3 diff
(96.5 %id)
FN163380 breast carcinoma .e 4039 to 4124 86 to 1     Submitted on the opposite strand 86/87
(98 %)
2 diff
(97.8 %id)
FN149244 breast carcinoma .e 4051 to 4154 1 to 102       102/102
(100 %)
3 diff
(97.1 %id)
EC542733 Prostate .e 4053 to 4152 100 to 4       97/100
(97 %)
0 diff
(100 %id)
FN098227 breast carcinoma .e 4058 to 4132 1 to 77       77/78
(98 %)
3 diff
(96.2 %id)
AK294516 amygdala .f 1 to 1149 1 to 1149 exact tiling clone,   1149/1149
(100 %)
0 diff
(100 %id)
DC318116 amygdala .f 1 to 604 1 to 604       604/604
(100 %)
0 diff
(100 %id)
DC371448   .f 1 to 576 1 to 576       576/577
(99 %)
3 diff
(99.5 %id)
DC391282 Spleen .f 9 to 557 1 to 549       549/549
(100 %)
0 diff
(100 %id)
BU899258 Spleen .g-u 1 to 516 1 to 517 S27G S80F L100F D101R R102Q ... tiling clone,   517/1054
(49 %)
14 diff
(98.7 %id)
CB993879 placenta, pre-eclamptic placenta .h-u 1 to 765 28 to 800       778/805
(96 %)
28 diff
(96.6 %id)
CB992728 placenta, pre-eclamptic placenta .h-u 1 to 600 28 to 627       605/665
(90 %)
11 diff
(98.4 %id)
CB989643 Human Placenta, placenta .h-u 1 to 699 28 to 736   tiling clone,   714/777
(91 %)
13 diff
(98.4 %id)
CB154653 brain .h-u 1 to 352 1 to 352       352/352
(100 %)
1 diff
(99.8 %id)
CB133443 Liver .h-u 1 to 382 1 to 382       382/382
(100 %)
0 diff
(100 %id)
CB146513 Liver .h-u 1 to 580 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA116073 cerebellum .h-u 2 to 557 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA568353 whole embryo, mainly head .h-u 2 to 686 2 to 698   capped   697/754
(92 %)
17 diff
(97.8 %id)
AI027468 parathyroid gland, parathyroid tumor .h-u 233 to 457 1 to 225     Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
R66585 placenta .h-u 350 to 794 1 to 454   fully sequenced,   454/454
(100 %)
33 diff
(92.8 %id)
CR738948 placenta .h-u 351 to 1129 1 to 784 G49W V50S T51D E52R G53R ...     784/784
(100 %)
6 diff
(99.3 %id)
CN484810 eye .h-u 399 to 1022 627 to 4   tiling clone, Submitted on the opposite strand 624/627
(99 %)
0 diff
(100 %id)
BI481063 Native Retinal Pigment Epithelium sheets, retina .h-u 460 to 910 12 to 464       453/465
(97 %)
3 diff
(99.4 %id)
AA091773   .h-u 652 to 924 1 to 270       270/276
(97 %)
8 diff
(97.2 %id)
AV748688 Pituitary .h-u 663 to 934 1 to 269       269/277
(97 %)
4 diff
(98.6 %id)
TI_151726119   .h-u 675 to 1187 550 to 38 exact     513/796
(64 %)
0 diff
(100 %id)
TI_151762892   .h-u 675 to 1187 564 to 52 exact     513/1017
(50 %)
0 diff
(100 %id)
BM726461 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 682 to 1182 1 to 501 exact     501/501
(100 %)
0 diff
(100 %id)
BM931349 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 682 to 1170 1 to 489 exact     489/489
(100 %)
0 diff
(100 %id)
AW614125 Kidney .h-u 705 to 1157 453 to 1 E31Q S72I     453/453
(100 %)
6 diff
(98.7 %id)
AA470373 colon .h-u 725 to 1118 394 to 1 G42E     394/394
(100 %)
1 diff
(99.8 %id)
BF764924 colon_est .h-u 737 to 1181 445 to 1 exact   Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
AW006557 Prostate .h-u 739 to 1167 429 to 1 exact     429/429
(100 %)
1 diff
(99.8 %id)
BF002913 Prostate .h-u 739 to 1167 429 to 1 exact     429/429
(100 %)
0 diff
(100 %id)
AI861906 colon, colon tumor, RER+ .h-u 741 to 1167 428 to 1 G43E L47V G49W V50S T51D ...     428/428
(100 %)
3 diff
(99.3 %id)
AI377135   .h-u 766 to 1169 404 to 1       404/458
(88 %)
0 diff
(100 %id)
BI029079 marrow .h-u 774 to 1185 423 to 12       412/424
(97 %)
0 diff
(100 %id)
R66586 placenta .h-u 774 to 1179 415 to 1   fully sequenced,   415/415
(100 %)
25 diff
(94.0 %id)
AI867383 colon, colon tumor, RER+ .h-u 786 to 1157 371 to 1       371/371
(100 %)
2 diff
(99.5 %id)
AW612309 Kidney .h-u 798 to 1167 370 to 1       370/370
(100 %)
1 diff
(99.8 %id)
AI333524 lung .h-u 801 to 1157 357 to 1       357/357
(100 %)
0 diff
(100 %id)
BE463689 Kidney .h-u 805 to 1167 363 to 1       363/363
(100 %)
0 diff
(100 %id)
BF111714 pooled .h-u 818 to 1167 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AA233310 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 824 to 1140 1 to 318   fully sequenced,   318/318
(100 %)
2 diff
(99.4 %id)
FN128230 breast carcinoma .h-u 841 to 940 1 to 100       100/100
(100 %)
4 diff
(96.0 %id)
FN047504 breast carcinoma .h-u 845 to 910 65 to 1     Submitted on the opposite strand 65/65
(100 %)
1 diff
(98.5 %id)
DB354853 whole embryo, mainly head .h-u 854 to 1438 578 to 1       578/583
(99 %)
20 diff
(96.6 %id)
AA327207 colon .h-u 858 to 1278 1 to 419       419/419
(100 %)
3 diff
(99.3 %id)
AW960581   .h-u 859 to 1417 1 to 555   tiling clone,   555/560
(99 %)
4 diff
(99.3 %id)
AA468968   .h-u 882 to 1199 1 to 319       319/319
(100 %)
5 diff
(98.5 %id)
AA233311 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 890 to 1167 278 to 1   fully sequenced,   278/278
(100 %)
0 diff
(100 %id)
AA592913 colon, colon tumor RER+ .h-u 897 to 1167 271 to 1       271/299
(90 %)
0 diff
(100 %id)
AI431718 Kidney .h-u 898 to 1169 272 to 1       272/272
(100 %)
0 diff
(100 %id)
AI249700 Kidney .h-u 913 to 1169 257 to 1       257/257
(100 %)
1 diff
(99.7 %id)
BQ187319 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 928 to 1179 1 to 251       251/251
(100 %)
2 diff
(99.3 %id)
FN114064 breast carcinoma .h-u 961 to 1060 102 to 1     Submitted on the opposite strand 102/102
(100 %)
6 diff
(94.2 %id)
AI634151 pooled germ cell tumors .h-u 970 to 1146 179 to 3       177/179
(98 %)
0 diff
(100 %id)
BE551967 pooled germ cell tumors .h-u 970 to 1157 188 to 1       188/188
(100 %)
0 diff
(100 %id)
TI_153991178   .h-u 977 to 1187 270 to 60       211/271
(77 %)
0 diff
(100 %id)
AW207034   .h-u 996 to 1186 191 to 1       191/191
(100 %)
0 diff
(100 %id)
AA678089 liver and spleen .h-u 998 to 1438 442 to 1       442/442
(100 %)
1 diff
(99.8 %id)
AA468502   .h-u 1090 to 1446 368 to 12       357/368
(97 %)
0 diff
(100 %id)
FN119050 breast carcinoma .h-u 1131 to 1221 1 to 91       91/95
(95 %)
2 diff
(97.9 %id)
AW139701   .h-u 1181 to 1473 1 to 293     Submitted on the opposite strand 293/302
(97 %)
3 diff
(99.1 %id)
BM720514 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 1189 to 1491 317 to 15   tiling clone, Submitted on the opposite strand 303/317
(95 %)
0 diff
(100 %id)
AI183965   .h-u 1199 to 1475 1 to 278   AAA Submitted on the opposite strand 278/278
(100 %)
1 diff
(99.7 %id)
DW467368 Liver .h-u 1203 to 1506 17 to 319   tiling clone,   303/346
(87 %)
10 diff
(97.2 %id)
AI217258   .h-u 1212 to 1357 1 to 146     Submitted on the opposite strand 146/146
(100 %)
0 diff
(100 %id)
FN167759 breast carcinoma .h-u 1213 to 1324 1 to 111       111/112
(99 %)
2 diff
(98.3 %id)
CV571209 cornea, eye .h-u 1474 to 2098 1 to 625   tiling clone,   625/625
(100 %)
1 diff
(99.9 %id)
BE179401 head_neck .h-u 1848 to 2160 1 to 313   tiling clone,   313/316
(99 %)
3 diff
(99.1 %id)
BG697801 skin .h-u 1989 to 2720 1 to 735   tiling clone,   735/735
(100 %)
8 diff
(99.0 %id)
DA105900 cerebellum .i 1 to 546 2 to 547   capped   546/546
(100 %)
5 diff
(99.1 %id)
DA954683 Spleen .i 1 to 549 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DA989530 synovial membrane tissue from rheumatioidarthritis .i 24 to 576 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA299760 hippocampus .i 30 to 604 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DB083351 testis .i 30 to 593 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DB154882 thymus .i 30 to 614 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA094118 cerebellum .i 35 to 602 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA173954 amygdala .i 35 to 612 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
DA221825 brain .i 35 to 573 2 to 540   capped   539/539
(100 %)
3 diff
(99.5 %id)
DA225528 brain .i 35 to 691 2 to 658 S20N L35S tiling clone, capped   657/657
(100 %)
2 diff
(99.7 %id)
DA226669 brain .i 35 to 596 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA227915 brain .i 35 to 509 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
DA243849 brain .i 35 to 636 2 to 603   capped   602/602
(100 %)
4 diff
(99.4 %id)
DA322655 hippocampus .i 35 to 514 2 to 481   capped   480/480
(100 %)
3 diff
(99.4 %id)
DA332888 hippocampus .i 35 to 608 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA338500 hippocampus .i 35 to 390 2 to 357   capped   356/356
(100 %)
0 diff
(100 %id)
DA381891 thalamus .i 35 to 582 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA396120 thalamus .i 35 to 615 2 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
DA397759 thalamus .i 35 to 602 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA627356 Kidney .i 35 to 584 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA864190 placenta .i 35 to 638 2 to 606   capped   605/605
(100 %)
4 diff
(99.4 %id)
DB181045 kidney, tumor tissue .i 35 to 614 2 to 581   capped   580/580
(100 %)
7 diff
(98.8 %id)
DB255721 uterus .i 35 to 609 2 to 576   capped   575/577
(99 %)
5 diff
(99.2 %id)
DB283021 uterus .i 35 to 579 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DB283301 uterus .i 35 to 578 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DC343362 thalamus .j 1 to 651 1 to 651 exact tiling clone,   651/651
(100 %)
0 diff
(100 %id)
CR736767   .k-u 1 to 785 1 to 786 W94V V95G Q96T H97A E98* tiling clone,   786/786
(100 %)
1 diff
(99.9 %id)
AK307114 brain .l 1 to 1029 2 to 1030 exact tiling clone,   1030/1030
(100 %)
0 diff
(100 %id)
DA311219 hippocampus .l 12 to 572 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DB132255 thymus .l 12 to 573 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DN992273 brain, whole brain .l 26 to 637 9 to 620 exact     612/620
(98 %)
6 diff
(99.1 %id)
AA422017 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l 326 to 813 496 to 9     Submitted on the opposite strand 488/496
(98 %)
0 diff
(100 %id)
BG036919 brain, hypothalamus .l 333 to 631 347 to 644 M60H M61D K62E V63S L64I ...     637/904
(70 %)
16 diff
(98.3 %id)
BG535571 lung .m 1 to 749 1 to 743   tiling clone,   743/743
(100 %)
29 diff
(96.1 %id)
BM172001 lung .m 2 to 454 1 to 452   tiling clone,   452/452
(100 %)
8 diff
(98.3 %id)
AW293915   .m 673 to 1203 19 to 549 T37I tiling clone, Submitted on the opposite strand 531/549
(96 %)
7 diff
(98.8 %id)
TI_149312645   .m 764 to 1525 852 to 91   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 762/989
(77 %)
7 diff
(99.3 %id)
TI_149305942   .m 773 to 1539 881 to 119       763/996
(76 %)
12 diff
(98.8 %id)
CD519571 White Matter .m 822 to 1628 1 to 816   tiling clone,   816/816
(100 %)
15 diff
(98.2 %id)
CD558985 White Matter .m 822 to 1521 1 to 703       703/897
(78 %)
7 diff
(99.3 %id)
TI_154026419   .m 824 to 1525 783 to 85   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 699/701
(99 %)
4 diff
(99.5 %id)
CV573869 cornea, eye .m 828 to 1452 1 to 625       625/625
(100 %)
0 diff
(100 %id)
BX114138 liver and spleen .m 847 to 1539 693 to 1   tiling clone,   693/693
(100 %)
0 diff
(100 %id)
DA804075 brain .n 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
CN306367 embryonic stem cells, cell lines H1, H7, andH9 .o 1 to 625 1 to 625 exact tiling clone,   625/625
(100 %)
1 diff
(99.9 %id)
DB227829 trachea .p 1 to 543 2 to 544 L16S tiling clone, capped   543/543
(100 %)
1 diff
(99.9 %id)
DB513421 testis .p 513 to 942 1 to 431     Submitted on the opposite strand 431/433
(99 %)
16 diff
(96.4 %id)
AV762984 bone marrow .p 531 to 954 1 to 426   tiling clone,   426/652
(65 %)
11 diff
(98.4 %id)
AW088478 ovary, tumor, 5 pooled (see description) .p 538 to 959 423 to 1   tiling clone,   423/423
(100 %)
6 diff
(98.6 %id)
AK057082 small intestine .q 1 to 1897 2 to 1898   tiling clone, available from FLJ,   1898/1898
(100 %)
1 diff
(100.0 %id)
DA915785 small intestine .q 1 to 801 2 to 792   capped   791/791
(100 %)
14 diff
(98.3 %id)
DA947095 Spleen .q 104 to 659 2 to 558   capped   557/557
(100 %)
4 diff
(99.3 %id)
AW363361 colon .q 490 to 1071 10 to 589       580/589
(98 %)
6 diff
(99.0 %id)
AW363369 colon .q 494 to 1071 578 to 1       578/605
(95 %)
17 diff
(97.2 %id)
AW363357 colon .q 495 to 1071 16 to 590       575/590
(97 %)
6 diff
(99.0 %id)
BF887721 testis_normal .q 635 to 782 170 to 24     Submitted on the opposite strand 147/172
(85 %)
0 diff
(100 %id)
AW857864 colon .q 694 to 1071 378 to 1       378/378
(100 %)
6 diff
(98.5 %id)
DB275203 uterus .q 706 to 1280 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
AW857866 colon .q 711 to 1071 361 to 1       361/361
(100 %)
4 diff
(98.9 %id)
CN306304 embryonic stem cells, cell lines H1, H7, andH9 .q 808 to 1546 1 to 738       738/738
(100 %)
4 diff
(99.5 %id)
DB331594 small intestine .q 1436 to 1897 462 to 1       462/501
(92 %)
3 diff
(99.5 %id)
BP230107 brain .r 1 to 582 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP230133 brain .r 1 to 580 1 to 582       582/582
(100 %)
12 diff
(98.0 %id)
DA115539 cerebellum .r 2 to 557 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
DA193463 amygdala .r 25 to 615 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA345434 substantia nigra .r 25 to 590 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
TI_44350818   .r 29 to 758 123 to 848       726/959
(75 %)
14 diff
(98.6 %id)
BI562414 testis .r 30 to 758 1 to 725   tiling clone,   725/836
(86 %)
14 diff
(98.4 %id)
DA660685   .r 31 to 585 2 to 556   capped   555/560
(99 %)
1 diff
(99.9 %id)
DA779819 brain .r 31 to 609 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB281472 uterus .r 31 to 583 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA409190 thalamus .r 33 to 584 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA892117 rectum .r 33 to 590 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB136322 thymus .r 33 to 475 2 to 444   capped   443/443
(100 %)
0 diff
(100 %id)
DB211546 trachea .r 33 to 507 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
DA114428 cerebellum .r 34 to 594 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA143874 amygdala .r 36 to 600 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA185745 amygdala .r 36 to 572 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DA235136 brain .r 36 to 619 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA237130 brain .r 36 to 610 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA247696 brain .r 36 to 613 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA297049 hippocampus .r 36 to 614 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA396724 thalamus .r 36 to 626 2 to 592   capped   591/594
(99 %)
2 diff
(99.7 %id)
DA402648 thalamus .r 36 to 594 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA759878   .r 36 to 394 2 to 360   capped   359/359
(100 %)
0 diff
(100 %id)
DA799019 brain .r 36 to 576 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB150790 thymus .r 36 to 534 2 to 504   capped   503/503
(100 %)
5 diff
(99.1 %id)
DB238596 trachea .r 36 to 626 2 to 592   tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
BI465327 testis .r 45 to 676 13 to 629       619/701
(88 %)
25 diff
(96.5 %id)
H43539 breast .r 267 to 613 1 to 359     Submitted on the opposite strand 359/384
(93 %)
13 diff
(96.7 %id)
BG429369 Kidney .r 666 to 1437 1 to 768   tiling clone,   768/987
(77 %)
12 diff
(98.8 %id)
BG548780 lung .r 1032 to 1707 1 to 671 L172W tiling clone,   671/672
(99 %)
13 diff
(98.1 %id)
DA283310 corpus callosum .s 1 to 550 3 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
CD518713 White Matter .s 372 to 1184 1 to 823 A126C G127W T128D H129T D130* tiling clone,   823/914
(90 %)
23 diff
(97.5 %id)
BF693837 muscle (skeletal) .t-u 1 to 721 1 to 715 exact tiling clone,   715/902
(79 %)
32 diff
(96.5 %id)
CA314532 Human Lung Epithelial cells, lung .t-u 234 to 964 747 to 17 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 731/731
(100 %)
1 diff
(99.9 %id)
AA995145 pooled .u-u 1 to 361 1 to 361 exact tiling clone, Submitted on the opposite strand 361/361
(100 %)
0 diff
(100 %id)
BX954717   .u-u 164 to 770 1 to 608   tiling clone,   608/608
(100 %)
2 diff
(99.7 %id)
BF342417 brain, glioblastoma with EGFR amplification .va 1 to 670 1 to 660 A30V T31L A32H S33L Y34M ... tiling clone,   660/963
(68 %)
13 diff
(98.7 %id)
AL118814 amygdala .vb-u 1 to 266 1 to 266   tiling clone,   266/266
(100 %)
0 diff
(100 %id)
CA407980 adipose .vb-u 129 to 637 1 to 507 exact tiling clone,   507/507
(100 %)
4 diff
(99.3 %id)
46 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u, .i, .j, .k-u, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u-u, .va, .vb-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI