| cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
| DA508602 | brain | .a | 1 to 547 | 2 to 548 | tiling clone, capped | 547/547 (100 %) | 3 diff (99.5 %id) | ||
| CR994850 | T-Lymphocytes | .a | 31 to 599 | 1 to 569 | tiling clone, | 569/573 (99 %) | 1 diff (99.9 %id) | ||
| AF318339 | .a | 538 to 1804 | 1 to 1267 | tiling clone, AAA | 1267/1267 (100 %) | 1 diff (100.0 %id) | |||
| DA101332 | cerebellum | .a | 628 to 1190 | 2 to 564 | capped | 563/565 (99 %) | 6 diff (99.0 %id) | ||
| BC000030 | Placenta, choriocarcinoma | .a | 692 to 1804 | 1 to 1114 | available from MGC, AAA | 1114/1114 (100 %) | 1 diff (100.0 %id) | ||
| CB993710 | placenta, pre-eclamptic placenta | .a | 707 to 1256 | 27 to 579 | 552/824 (66 %) | 21 diff (97.5 %id) | |||
| CD110141 | placenta, pre-eclamptic placenta | .a | 707 to 1272 | 27 to 597 | 566/954 (59 %) | 14 diff (98.6 %id) | |||
| AF332469 | .a | 709 to 6139 | 1 to 5431 | exact | tiling clone, | 5431/5431 (100 %) | 0 diff (100 %id) | ||
| BE278867 | choriocarcinoma, placenta | .a | 709 to 1421 | 1 to 717 | available from MGC, | 717/717 (100 %) | 18 diff (97.5 %id) | ||
| NM_023034.1 | .a | 709 to 6139 | 1 to 5431 | exact | RefSeq, | 5431/5431 (100 %) | 0 diff (100 %id) | ||
| BE901171 | choriocarcinoma, placenta | .a | 712 to 1428 | 1 to 716 | 716/716 (100 %) | 1 diff (99.9 %id) | |||
| DB224467 | trachea | .a | 715 to 1249 | 10 to 544 | capped | 535/543 (98 %) | 6 diff (98.9 %id) | ||
| BC007787 | Placenta, choriocarcinoma | .a | 718 to 1802 | 1 to 1085 | available from MGC, AAA | 1085/1085 (100 %) | 0 diff (100 %id) | ||
| CD676194 | eye, lens | .a | 721 to 1350 | 1 to 630 | 630/630 (100 %) | 0 diff (100 %id) | |||
| BE278094 | choriocarcinoma, placenta | .a | 736 to 1413 | 1 to 678 | available from MGC, | 678/679 (99 %) | 10 diff (98.6 %id) | ||
| BG337361 | leiomyosarcoma cell line, uterus | .a | 740 to 1567 | 1 to 838 | available from MGC, | 838/862 (97 %) | 23 diff (97.4 %id) | ||
| CR980720 | T-Lymphocytes | .a | 743 to 1179 | 1 to 437 | 437/437 (100 %) | 6 diff (98.7 %id) | |||
| CT004760 | T-Lymphocytes | .a | 747 to 1005 | 1 to 259 | 259/260 (99 %) | 1 diff (99.7 %id) | |||
| DA237775 | brain | .a | 756 to 1299 | 2 to 545 | capped | 544/544 (100 %) | 0 diff (100 %id) | ||
| DA414747 | thalamus | .a | 756 to 1319 | 2 to 566 | capped | 565/565 (100 %) | 1 diff (99.9 %id) | ||
| DA461249 | tongue, tumor tissue | .a | 756 to 1233 | 2 to 487 | capped | 486/487 (99 %) | 16 diff (96.8 %id) | ||
| DR000797 | fetal brain | .a | 759 to 1335 | 8 to 584 | 577/584 (98 %) | 8 diff (98.7 %id) | |||
| BI918317 | brain | .a | 771 to 1301 | 1 to 543 | available from MGC, | 538/543 (99 %) | 28 diff (94.9 %id) | ||
| DB222823 | trachea | .a | 782 to 1367 | 2 to 587 | capped | 586/586 (100 %) | 1 diff (99.9 %id) | ||
| DA758637 | .a | 783 to 1335 | 2 to 554 | capped | 553/553 (100 %) | 0 diff (100 %id) | |||
| DA799816 | brain | .a | 783 to 1333 | 2 to 553 | capped | 552/552 (100 %) | 1 diff (99.9 %id) | ||
| DB013877 | esophageal, tumor tissue | .a | 783 to 1286 | 2 to 505 | capped | 504/504 (100 %) | 0 diff (100 %id) | ||
| BE545690 | cervical carcinoma cell line, cervix | .a | 805 to 1136 | 1 to 335 | 335/695 (48 %) | 4 diff (99.5 %id) | |||
| U17906 | Fibroblast, liver cell line | .a | 815 to 1103 | 291 to 1 | 291/291 (100 %) | 8 diff (97.3 %id) | |||
| BG026852 | Bone, osteosarcoma, cell line | .a | 823 to 1460 | 101 to 755 | 686/1132 (60 %) | 68 diff (94.0 %id) | |||
| DA190854 | amygdala | .a | 837 to 1430 | 2 to 596 | capped | 595/595 (100 %) | 1 diff (99.9 %id) | ||
| CN340998 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 865 to 1408 | 1 to 544 | 544/544 (100 %) | 0 diff (100 %id) | |||
| AJ295990 | .a | 914 to 6150 | 1 to 5236 | G829E | tiling clone, AAA | 5236/5236 (100 %) | 7 diff (99.9 %id) | ||
| AU124101 | .a | 1032 to 1819 | 2 to 790 | capped | 789/791 (99 %) | 5 diff (99.4 %id) | |||
| DA294845 | hippocampus | .a | 1045 to 1600 | 2 to 557 | capped | 556/556 (100 %) | 0 diff (100 %id) | ||
| DA104686 | cerebellum | .a | 1094 to 1651 | 2 to 559 | capped | 558/558 (100 %) | 1 diff (99.9 %id) | ||
| BC115007 | PCR rescued clones | .a | 1123 to 5564 | 1 to 4440 | K408R S409V V410L A411P S412P ... | 4440/4456 (99 %) | 13 diff (99.8 %id) | ||
| BC115006 | PCR rescued clones | .a | 1129 to 5564 | 16 to 4451 | G436R R578G C926R K1308R D1430G | 4436/4467 (99 %) | 13 diff (99.8 %id) | ||
| BC115008 | PCR rescued clones | .a | 1129 to 5564 | 4452 to 17 | T583A Q603R V862A | Submitted on the opposite strand | 4436/4463 (99 %) | 5 diff (99.9 %id) | |
| BC101717 | Brain, cerebral cortex, PCR rescued clones | .a | 1135 to 5638 | 1 to 4504 | exact | 4504/4504 (100 %) | 0 diff (100 %id) | ||
| BC113469 | Brain, cerebral cortex, PCR rescued clones | .a | 1135 to 5638 | 1 to 4504 | exact | 4504/4504 (100 %) | 0 diff (100 %id) | ||
| TI_927047566 | .a | 1135 to 2252 | 48 to 1150 | 1107/1237 (89 %) | 29 diff (97.7 %id) | ||||
| TI_927047831 | .a | 1135 to 2238 | 39 to 1135 | 1100/1229 (89 %) | 20 diff (98.4 %id) | ||||
| TI_927047835 | .a | 1135 to 2142 | 49 to 1053 | 1005/1224 (82 %) | 14 diff (98.9 %id) | ||||
| TI_1243022489 | .a | 1135 to 2254 | 40 to 1156 | 1117/1237 (90 %) | 26 diff (97.9 %id) | ||||
| TI_1243022979 | .a | 1135 to 2292 | 52 to 1198 | 1147/1249 (91 %) | 27 diff (97.9 %id) | ||||
| BM147156 | leukopheresis | .a | 1160 to 1633 | 1 to 474 | 474/474 (100 %) | 1 diff (99.8 %id) | |||
| BC073858 | Brain, anaplastic oligodendroglioma with1p/19q loss | .a | 1183 to 3026 | 1 to 1844 | available from MGC, AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 1844/1844 (100 %) | 5 diff (99.8 %id) | |
| CB241898 | Human Lung Epithelial cells, lung | .a | 1185 to 1804 | 636 to 17 | AAA | 620/634 (97 %) | 4 diff (99.4 %id) | ||
| TI_927044273 | .a | 1194 to 2300 | 6 to 1113 | 1108/1243 (89 %) | 23 diff (98.2 %id) | ||||
| TI_927044496 | .a | 1196 to 2291 | 11 to 1109 | 1099/1271 (86 %) | 24 diff (98.2 %id) | ||||
| TI_1243017871 | .a | 1202 to 2291 | 16 to 1096 | 1081/1226 (88 %) | 17 diff (98.7 %id) | ||||
| BP421051 | small intestine | .a | 1205 to 1707 | 1 to 503 | Submitted on the opposite strand | 503/503 (100 %) | 0 diff (100 %id) | ||
| TI_159696735 | .a | 1209 to 1827 | 681 to 63 | 619/1068 (57 %) | 0 diff (100 %id) | ||||
| CN480695 | Cell Line, Chondrosarcoma | .a | 1209 to 1804 | 612 to 17 | AAA | 596/604 (98 %) | 0 diff (100 %id) | ||
| CV030108 | mixed | .a | 1227 to 1833 | 1 to 607 | 607/607 (100 %) | 2 diff (99.7 %id) | |||
| BM984379 | lung, Primary Lung Epithelial Cells | .a | 1232 to 1858 | 12 to 642 | Submitted on the opposite strand | 631/642 (98 %) | 3 diff (99.6 %id) | ||
| AI697751 | carcinoid, lung | .a | 1244 to 1805 | 562 to 1 | 562/562 (100 %) | 0 diff (100 %id) | |||
| AI479200 | Kidney | .a | 1248 to 1726 | 1 to 479 | Submitted on the opposite strand | 479/479 (100 %) | 0 diff (100 %id) | ||
| BF511656 | .a | 1290 to 1819 | 530 to 1 | 530/540 (98 %) | 0 diff (100 %id) | ||||
| BF435843 | pooled | .a | 1301 to 1807 | 505 to 1 | 505/505 (100 %) | 5 diff (99.1 %id) | |||
| BM785402 | Ascites, stomach | .a | 1301 to 1805 | 1 to 505 | 505/505 (100 %) | 0 diff (100 %id) | |||
| AA927572 | pooled germ cell tumors | .a | 1328 to 1806 | 478 to 1 | 478/478 (100 %) | 2 diff (99.6 %id) | |||
| AW082358 | pooled | .a | 1336 to 1807 | 472 to 1 | 472/472 (100 %) | 0 diff (100 %id) | |||
| AI621216 | pooled germ cell tumors | .a | 1337 to 1804 | 468 to 1 | 468/468 (100 %) | 0 diff (100 %id) | |||
| AI656205 | pooled germ cell tumors | .a | 1339 to 1805 | 466 to 1 | 466/466 (100 %) | 2 diff (99.6 %id) | |||
| AI922498 | Kidney | .a | 1351 to 1796 | 455 to 10 | 446/455 (98 %) | 0 diff (100 %id) | |||
| TI_927044274 | .a | 1359 to 2575 | 3 to 1219 | 1217/1241 (98 %) | 42 diff (96.7 %id) | ||||
| TI_1243017845 | .a | 1365 to 2487 | 11 to 1134 | 1124/1243 (90 %) | 25 diff (98.0 %id) | ||||
| TI_927044497 | .a | 1367 to 2542 | 11 to 1186 | 1176/1251 (94 %) | 28 diff (97.8 %id) | ||||
| BG539760 | lung | .a | 1385 to 2072 | 1 to 688 | 688/688 (100 %) | 2 diff (99.8 %id) | |||
| AW390285 | stomach | .a | 1386 to 1888 | 596 to 94 | 503/597 (84 %) | 0 diff (100 %id) | |||
| AA629215 | .a | 1387 to 1495 | 109 to 1 | 109/109 (100 %) | 0 diff (100 %id) | ||||
| FN067005 | breast carcinoma | .a | 1392 to 1490 | 1 to 99 | 99/99 (100 %) | 1 diff (99.0 %id) | |||
| AA555107 | adrenal adenoma, adrenal gland | .a | 1421 to 1805 | 384 to 1 | 384/384 (100 %) | 1 diff (99.8 %id) | |||
| BE467586 | carcinoid, lung | .a | 1426 to 1805 | 381 to 1 | 381/381 (100 %) | 3 diff (99.3 %id) | |||
| AW593273 | pooled | .a | 1431 to 1807 | 377 to 1 | 377/377 (100 %) | 0 diff (100 %id) | |||
| AI206263 | pooled germ cell tumors | .a | 1458 to 1806 | 349 to 1 | 349/349 (100 %) | 2 diff (99.5 %id) | |||
| BF059146 | pooled germ cell tumors | .a | 1458 to 1805 | 348 to 1 | 348/348 (100 %) | 0 diff (100 %id) | |||
| F31837 | pectoral muscle (after mastectomy) | .a | 1459 to 1736 | 31 to 307 | 277/307 (90 %) | 6 diff (98.1 %id) | |||
| BF476201 | Kidney | .a | 1464 to 1805 | 342 to 1 | 342/342 (100 %) | 0 diff (100 %id) | |||
| AW073969 | 2 pooled high-grade transitional celltumors, genitourinary tract | .a | 1475 to 1815 | 341 to 1 | 341/341 (100 %) | 0 diff (100 %id) | |||
| FN074238 | breast carcinoma | .a | 1485 to 1533 | 1 to 49 | 49/50 (98 %) | 1 diff (98.0 %id) | |||
| AA569721 | .a | 1486 to 1813 | 330 to 3 | 328/330 (99 %) | 0 diff (100 %id) | ||||
| FN176557 | breast carcinoma | .a | 1515 to 1627 | 1 to 113 | 113/113 (100 %) | 3 diff (97.4 %id) | |||
| AA721394 | germinal center B cell | .a | 1516 to 1804 | 299 to 11 | AAA | 289/289 (100 %) | 2 diff (99.4 %id) | ||
| AA570760 | .a | 1518 to 1813 | 299 to 3 | 297/299 (99 %) | 0 diff (100 %id) | ||||
| CA429037 | Cell Line, Chondrosarcoma | .a | 1520 to 2246 | 19 to 746 | Submitted on the opposite strand | 726/728 (99 %) | 7 diff (99.1 %id) | ||
| BU619801 | Cell Line, Chondrosarcoma | .a | 1521 to 1858 | 20 to 357 | Submitted on the opposite strand | 338/357 (94 %) | 6 diff (98.4 %id) | ||
| AL702951 | human skeletal muscle | .a | 1530 to 2282 | 1 to 753 | 753/753 (100 %) | 1 diff (99.9 %id) | |||
| BQ477726 | insulinoma, Pancreas | .a | 1530 to 2077 | 8 to 555 | 548/555 (98 %) | 6 diff (99.0 %id) | |||
| CK826156 | insulinoma, Pancreas | .a | 1530 to 2083 | 7 to 560 | 554/560 (98 %) | 6 diff (99.0 %id) | |||
| CF265003 | Brain glioblastoma | .a | 1537 to 2291 | 1 to 762 | 762/921 (82 %) | 10 diff (99.0 %id) | |||
| T97900 | liver and spleen | .a | 1543 to 1807 | 265 to 1 | 265/438 (60 %) | 4 diff (99.1 %id) | |||
| DA645018 | .a | 1583 to 2174 | 2 to 593 | capped | 592/592 (100 %) | 1 diff (99.9 %id) | |||
| TI_149283052 | .a | 1592 to 2376 | 862 to 82 | AAA | 781/808 (96 %) | 21 diff (97.5 %id) | |||
| BG149818 | carcinoid, lung | .a | 1602 to 1808 | 208 to 2 | 207/208 (99 %) | 0 diff (100 %id) | |||
| FN089150 | breast carcinoma | .a | 1604 to 1682 | 77 to 1 | Submitted on the opposite strand | 77/79 (97 %) | 2 diff (97.5 %id) | ||
| AI804011 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .a | 1614 to 1952 | 396 to 58 | AAA | 339/383 (88 %) | 1 diff (99.8 %id) | ||
| AW751732 | colon | .a | 1625 to 2271 | 14 to 649 | 636/703 (90 %) | 25 diff (96.5 %id) | |||
| AA641791 | germinal center B cell | .a | 1632 to 1874 | 1 to 243 | 243/243 (100 %) | 0 diff (100 %id) | |||
| AA917478 | Kidney | .a | 1655 to 1805 | 151 to 1 | 151/151 (100 %) | 0 diff (100 %id) | |||
| DA767853 | brain | .a | 1683 to 2521 | 2 to 847 | capped | 846/846 (100 %) | 10 diff (98.9 %id) | ||
| DB002665 | breast, tumor tissue | .a | 1692 to 2261 | 2 to 572 | capped | 571/571 (100 %) | 1 diff (99.9 %id) | ||
| DA273373 | caudate nucleus | .a | 1703 to 2263 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) | ||
| BX480112 | .a | 1704 to 2202 | 1 to 499 | 499/499 (100 %) | 5 diff (99.0 %id) | ||||
| CN340999 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 1714 to 2384 | 1 to 671 | 671/671 (100 %) | 0 diff (100 %id) | |||
| AA361324 | .a | 1722 to 1975 | 1 to 255 | 255/267 (95 %) | 2 diff (99.3 %id) | ||||
| AW955428 | .a | 1723 to 2290 | 1 to 564 | 564/611 (92 %) | 10 diff (98.4 %id) | ||||
| CK826155 | insulinoma, Pancreas | .a | 1732 to 2367 | 636 to 1 | 636/636 (100 %) | 0 diff (100 %id) | |||
| BU618565 | Cell Line, Chondrosarcoma | .a | 1757 to 2474 | 735 to 19 | AAA | 717/717 (100 %) | 1 diff (99.9 %id) | ||
| BM983957 | lung, Primary Lung Epithelial Cells | .a | 1759 to 2390 | 634 to 4 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 631/634 (99 %) | 0 diff (100 %id) | |
| TI_927044261 | .a | 1780 to 2940 | 11 to 1166 | 1156/1238 (93 %) | 34 diff (97.3 %id) | ||||
| TI_927044484 | .a | 1782 to 2937 | 13 to 1161 | 1149/1242 (92 %) | 31 diff (97.6 %id) | ||||
| BF922053 | nervous_tumor | .a | 1782 to 2118 | 342 to 4 | Submitted on the opposite strand | 339/342 (99 %) | 0 diff (100 %id) | ||
| TI_1243017859 | .a | 1783 to 2941 | 15 to 1163 | 1149/1238 (92 %) | 27 diff (97.9 %id) | ||||
| DB316213 | brain | .a | 1844 to 2376 | 533 to 1 | 533/533 (100 %) | 0 diff (100 %id) | |||
| DA441664 | tongue, tumor tissue | .a | 1872 to 2400 | 2 to 531 | capped | 530/530 (100 %) | 1 diff (99.9 %id) | ||
| BQ477312 | insulinoma, Pancreas | .a | 1893 to 2367 | 475 to 1 | 475/475 (100 %) | 0 diff (100 %id) | |||
| DA553321 | .a | 1941 to 2196 | 2 to 257 | capped | 256/256 (100 %) | 0 diff (100 %id) | |||
| AI458145 | pooled | .a | 1952 to 2439 | 488 to 1 | 488/488 (100 %) | 0 diff (100 %id) | |||
| AA641821 | germinal center B cell | .a | 2021 to 2212 | 191 to 1 | 191/191 (100 %) | 5 diff (97.4 %id) | |||
| AA830496 | germinal center B cell | .a | 2028 to 2379 | 365 to 14 | AAA | 352/352 (100 %) | 7 diff (98.1 %id) | ||
| AW369659 | breast | .a | 2084 to 2483 | 428 to 30 | 399/428 (93 %) | 1 diff (99.8 %id) | |||
| TI_927044262 | .a | 2105 to 3267 | 1 to 1167 | 1167/1263 (92 %) | 26 diff (98.0 %id) | ||||
| TI_927044485 | .a | 2111 to 3345 | 6 to 1245 | 1240/1269 (97 %) | 32 diff (97.5 %id) | ||||
| TI_1243017833 | .a | 2118 to 3318 | 13 to 1214 | 1202/1256 (95 %) | 29 diff (97.7 %id) | ||||
| BG195745 | .a | 2136 to 2628 | 1 to 494 | 494/503 (98 %) | 5 diff (99.1 %id) | ||||
| BG208133 | .a | 2140 to 2630 | 1 to 489 | 489/497 (98 %) | 7 diff (98.6 %id) | ||||
| BF950906 | nervous_normal | .a | 2162 to 2481 | 28 to 347 | 320/347 (92 %) | 8 diff (97.7 %id) | |||
| R21001 | whole brain | .a | 2197 to 2485 | 1 to 289 | 289/300 (96 %) | 3 diff (99.0 %id) | |||
| DA719665 | .a | 2227 to 2801 | 2 to 578 | capped | 577/580 (99 %) | 3 diff (99.5 %id) | |||
| TI_1243017861 | .a | 2251 to 3427 | 1 to 1173 | 1173/1230 (95 %) | 24 diff (98.1 %id) | ||||
| TI_927044263 | .a | 2252 to 3464 | 1 to 1202 | 1203/1239 (97 %) | 30 diff (97.6 %id) | ||||
| TI_927044486 | .a | 2252 to 3463 | 1 to 1215 | 1215/1264 (96 %) | 31 diff (97.6 %id) | ||||
| AV649543 | corresponding non cancerous liver tissue | .a | 2280 to 2883 | 1 to 604 | Submitted on the opposite strand | 604/613 (98 %) | 1 diff (99.9 %id) | ||
| BF436765 | Prostate | .a | 2317 to 2754 | 554 to 118 | 437/554 (78 %) | 0 diff (100 %id) | |||
| AA375554 | lung | .a | 2329 to 2532 | 1 to 204 | 204/204 (100 %) | 0 diff (100 %id) | |||
| AV749074 | Pituitary | .a | 2354 to 2722 | 1 to 360 | 360/362 (99 %) | 9 diff (97.6 %id) | |||
| DB196301 | trachea | .a | 2401 to 2967 | 2 to 568 | capped | 567/567 (100 %) | 4 diff (99.3 %id) | ||
| AA330316 | .a | 2509 to 2709 | 1 to 201 | 201/201 (100 %) | 2 diff (99.1 %id) | ||||
| C18181 | placenta | .a | 2538 to 2935 | 1 to 398 | 398/417 (95 %) | 6 diff (98.6 %id) | |||
| BF741282 | bocio_tumor | .a | 2559 to 3092 | 538 to 8 | Submitted on the opposite strand | 531/538 (98 %) | 1 diff (99.9 %id) | ||
| TI_927044264 | .a | 2585 to 3667 | 1 to 1083 | 1083/1240 (87 %) | 13 diff (99.0 %id) | ||||
| TI_927044487 | .a | 2586 to 3668 | 1 to 1089 | 1089/1234 (88 %) | 16 diff (98.8 %id) | ||||
| TI_1243017835 | .a | 2587 to 3749 | 5 to 1172 | 1168/1242 (94 %) | 17 diff (98.7 %id) | ||||
| DA832034 | placenta | .a | 2699 to 3447 | 2 to 757 | capped | 754/756 (99 %) | 11 diff (98.6 %id) | ||
| BE172435 | head_neck | .a | 2869 to 3066 | 206 to 9 | Submitted on the opposite strand | 198/206 (96 %) | 0 diff (100 %id) | ||
| TI_927045615 | .a | 2937 to 4141 | 1219 to 22 | 1148/1246 (92 %) | 17 diff (98.7 %id) | ||||
| BM454976 | leiomyosarcoma, uterus | .a | 2950 to 3983 | 1 to 1037 | 1037/1104 (93 %) | 15 diff (98.7 %id) | |||
| TI_927044265 | .a | 2986 to 4141 | 1 to 1155 | 1155/1250 (92 %) | 28 diff (97.8 %id) | ||||
| TI_927044488 | .a | 2986 to 4128 | 1 to 1152 | 1152/1220 (94 %) | 25 diff (98.0 %id) | ||||
| TI_1243018061 | .a | 3002 to 4141 | 1163 to 23 | 1139/1257 (90 %) | 7 diff (99.5 %id) | ||||
| AW900689 | nervous_normal | .a | 3099 to 3513 | 426 to 11 | 416/426 (97 %) | 5 diff (98.9 %id) | |||
| BE783500 | eye, retinoblastoma | .a | 3139 to 3785 | 1 to 646 | AAA | 646/756 (85 %) | 17 diff (97.8 %id) | ||
| BF334260 | colon | .a | 3297 to 3496 | 200 to 1 | 200/207 (96 %) | 4 diff (98.1 %id) | |||
| TI_1243017837 | .a | 3312 to 4342 | 6 to 1031 | 1026/1230 (83 %) | 13 diff (99.0 %id) | ||||
| TI_927044266 | .a | 3330 to 4461 | 20 to 1145 | 1126/1256 (89 %) | 24 diff (98.1 %id) | ||||
| TI_927044489 | .a | 3330 to 4034 | 18 to 722 | 705/869 (81 %) | 17 diff (98.1 %id) | ||||
| BX506061 | .a | 3436 to 4128 | 1 to 693 | 693/693 (100 %) | 2 diff (99.8 %id) | ||||
| TI_927044267 | .a | 3468 to 4656 | 14 to 1211 | 1198/1271 (94 %) | 33 diff (97.5 %id) | ||||
| TI_1243017865 | .a | 3468 to 4625 | 17 to 1173 | 1157/1255 (92 %) | 24 diff (98.1 %id) | ||||
| TI_927044490 | .a | 3469 to 4633 | 17 to 1198 | AAA | 1182/1271 (92 %) | 33 diff (97.5 %id) | |||
| DB150944 | thymus | .a | 3594 to 4180 | 2 to 588 | capped | 587/587 (100 %) | 0 diff (100 %id) | ||
| TI_927046878 | .a | 3632 to 4499 | 887 to 13 | 875/887 (98 %) | 11 diff (98.8 %id) | ||||
| TI_927046250 | .a | 3761 to 4501 | 747 to 5 | 743/789 (94 %) | 14 diff (98.3 %id) | ||||
| TI_1243017839 | .a | 3821 to 4996 | 4 to 1186 | 1183/1240 (95 %) | 27 diff (97.9 %id) | ||||
| TI_927044268 | .a | 3832 to 4987 | 1 to 1171 | 1181/1257 (93 %) | 81 diff (93.6 %id) | ||||
| TI_927044491 | .a | 3836 to 4984 | 11 to 1161 | 1152/1243 (92 %) | 26 diff (98.0 %id) | ||||
| CR992537 | T-Lymphocytes | .a | 3924 to 4571 | 1 to 649 | 649/649 (100 %) | 2 diff (99.7 %id) | |||
| TI_927046898 | .a | 3956 to 4505 | 554 to 7 | 548/562 (97 %) | 7 diff (98.8 %id) | ||||
| TI_1243018435 | .a | 4028 to 4824 | 806 to 6 | 801/926 (86 %) | 13 diff (98.6 %id) | ||||
| TI_927046877 | .a | 4069 to 4809 | 767 to 27 | 741/767 (96 %) | 6 diff (99.3 %id) | ||||
| TI_1243017867 | .a | 4135 to 5382 | 14 to 1267 | 1254/1275 (98 %) | 43 diff (96.7 %id) | ||||
| TI_927044269 | .a | 4139 to 5273 | 19 to 1164 | 1147/1268 (90 %) | 29 diff (97.8 %id) | ||||
| BI091882 | cervix | .a | 4139 to 4728 | 1 to 603 | 603/753 (80 %) | 25 diff (96.7 %id) | |||
| TI_927044492 | .a | 4141 to 5218 | 20 to 1097 | 1080/1248 (86 %) | 31 diff (97.6 %id) | ||||
| CF265107 | Brain glioblastoma | .a | 4151 to 5025 | 1 to 886 | 886/893 (99 %) | 15 diff (98.4 %id) | |||
| AW902934 | nervous_normal | .a | 4164 to 4513 | 8 to 359 | 352/359 (98 %) | 6 diff (98.4 %id) | |||
| TI_927046897 | .a | 4174 to 4828 | 654 to 3 | 652/757 (86 %) | 13 diff (98.3 %id) | ||||
| TI_927046249 | .a | 4310 to 4805 | 524 to 28 | 497/524 (94 %) | 2 diff (99.7 %id) | ||||
| AA361570 | .a | 4339 to 4670 | 1 to 333 | 333/333 (100 %) | 4 diff (98.8 %id) | ||||
| TI_927046880 | .a | 4410 to 5093 | 727 to 43 | 685/727 (94 %) | 2 diff (99.8 %id) | ||||
| DB243048 | stomach, tumor tissue | .a | 4420 to 4977 | 2 to 559 | capped | 558/558 (100 %) | 0 diff (100 %id) | ||
| BF897858 | marrow | .a | 4440 to 4619 | 180 to 1 | Submitted on the opposite strand | 180/180 (100 %) | 5 diff (97.3 %id) | ||
| BF897855 | marrow | .a | 4467 to 4619 | 153 to 1 | Submitted on the opposite strand | 153/153 (100 %) | 1 diff (99.4 %id) | ||
| TI_927047661 | .a | 4471 to 5640 | 1222 to 68 | 1155/1269 (91 %) | 11 diff (99.2 %id) | ||||
| TI_1243017841 | .a | 4480 to 5639 | 1 to 1156 | 1156/1239 (93 %) | 16 diff (98.8 %id) | ||||
| TI_927047839 | .a | 4486 to 5640 | 1197 to 52 | 1146/1217 (94 %) | 23 diff (98.2 %id) | ||||
| TI_927044270 | .a | 4490 to 5640 | 11 to 1148 | 1138/1237 (91 %) | 28 diff (97.8 %id) | ||||
| TI_927044493 | .a | 4492 to 5640 | 13 to 1162 | 1150/1253 (91 %) | 28 diff (97.8 %id) | ||||
| TI_927046252 | .a | 4494 to 5131 | 642 to 3 | 640/642 (99 %) | 1 diff (99.9 %id) | ||||
| TI_1243023363 | .a | 4505 to 5639 | 1209 to 73 | 1137/1214 (93 %) | 34 diff (97.2 %id) | ||||
| BF842396 | head_neck | .a | 4507 to 4619 | 113 to 1 | Submitted on the opposite strand | 113/113 (100 %) | 0 diff (100 %id) | ||
| TI_1243018437 | .a | 4523 to 5125 | 603 to 3 | 601/681 (88 %) | 16 diff (97.7 %id) | ||||
| TI_1243022491 | .a | 4553 to 5639 | 1146 to 69 | 1078/1224 (88 %) | 14 diff (98.9 %id) | ||||
| TI_927047843 | .a | 4573 to 5640 | 1138 to 56 | 1083/1229 (88 %) | 26 diff (97.9 %id) | ||||
| TI_1243017869 | .a | 4664 to 5639 | 6 to 979 | 974/1169 (83 %) | 10 diff (99.2 %id) | ||||
| TI_927044271 | .a | 4670 to 5640 | 10 to 982 | 973/1227 (79 %) | 12 diff (99.1 %id) | ||||
| TI_927044494 | .a | 4675 to 5640 | 15 to 982 | 968/1236 (78 %) | 9 diff (99.3 %id) | ||||
| BG992991 | head_neck | .a | 4865 to 5296 | 450 to 19 | 432/450 (96 %) | 0 diff (100 %id) | |||
| CN340997 | embryonic stem cells, DMSO-treated H9 cellline | .a | 5000 to 5710 | 1 to 711 | 711/711 (100 %) | 0 diff (100 %id) | |||
| BM988212 | mixed | .a | 5029 to 5572 | 563 to 19 | AAA | Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) | 545/545 (100 %) | 1 diff (99.9 %id) | |
| TI_927044272 | .a | 5088 to 5640 | 1 to 552 | 553/1224 (45 %) | 7 diff (99.5 %id) | ||||
| TI_1243017843 | .a | 5088 to 5639 | 1 to 551 | 552/1239 (44 %) | 9 diff (99.3 %id) | ||||
| TI_927044495 | .a | 5112 to 5640 | 22 to 549 | 528/1245 (42 %) | 8 diff (99.4 %id) | ||||
| DA726002 | .a | 5312 to 5875 | 2 to 565 | capped | 564/564 (100 %) | 0 diff (100 %id) | |||
| BC143510 | Brain, cerebral cortex, PCR rescued clones | .b | 1 to 4471 | 1 to 4471 | exact | tiling clone, | 4471/4471 (100 %) | 0 diff (100 %id) | |
| CR999805 | T-Lymphocytes | .b | 3372 to 4201 | 1 to 830 | 830/831 (99 %) | 3 diff (99.7 %id) | |||
| BF842395 | head_neck | .b | 3500 to 3814 | 315 to 1 | Submitted on the opposite strand | 315/315 (100 %) | 1 diff (99.7 %id) | ||
| BF897866 | marrow | .b | 3500 to 3814 | 1 to 315 | 315/315 (100 %) | 0 diff (100 %id) | |||
| AK092166 | .b | 4156 to 6652 | 1 to 2497 | tiling clone, available from FLJ, | 2497/2497 (100 %) | 1 diff (100.0 %id) | |||
| DA691881 | .b | 4157 to 4729 | 2 to 575 | capped | 574/574 (100 %) | 1 diff (99.9 %id) | |||
| CA418341 | Bone, Human Chondrosarcoma Cell Line | .b | 4278 to 4989 | 725 to 14 | AAA | 712/712 (100 %) | 2 diff (99.8 %id) | ||
| AW301643 | Kidney | .b | 4523 to 4989 | 478 to 12 | AAA | 467/467 (100 %) | 3 diff (99.4 %id) | ||
| DA736300 | .b | 4684 to 5455 | 2 to 771 | capped | 770/772 (99 %) | 10 diff (98.8 %id) | |||
| T06559 | .b | 4686 to 5008 | 1 to 324 | 324/324 (100 %) | 2 diff (99.4 %id) | ||||
| BP314450 | mammary gland | .b | 4706 to 5286 | 1 to 580 | 580/580 (100 %) | 1 diff (99.9 %id) | |||
| DA027928 | .b | 5119 to 5662 | 2 to 545 | capped | 544/544 (100 %) | 1 diff (99.9 %id) | |||
| DA219076 | brain | .b | 5152 to 5754 | 2 to 605 | capped | 604/604 (100 %) | 2 diff (99.7 %id) | ||
| CN294143 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .b | 5345 to 5857 | 1 to 513 | 513/513 (100 %) | 0 diff (100 %id) | |||
| BQ954882 | sciatic nerve | .b | 5393 to 6268 | 1 to 876 | 876/876 (100 %) | 9 diff (99.0 %id) | |||
| BI911452 | leukocyte | .b | 5394 to 6039 | 31 to 673 | 643/673 (95 %) | 6 diff (99.2 %id) | |||
| TI_57232297 | .b | 5394 to 6039 | 31 to 673 | 643/673 (95 %) | 6 diff (99.2 %id) | ||||
| DB278334 | uterus | .b | 5437 to 5943 | 2 to 508 | capped | 507/507 (100 %) | 0 diff (100 %id) | ||
| BE006105 | breast_normal | .b | 5528 to 6026 | 501 to 2 | Submitted on the opposite strand | 500/509 (98 %) | 0 diff (100 %id) | ||
| BQ267558 | insulinoma, Pancreas | .b | 5575 to 5997 | 430 to 8 | Submitted on the opposite strand | 423/430 (98 %) | 0 diff (100 %id) | ||
| BE932148 | head_neck | .b | 5682 to 6186 | 509 to 5 | 505/509 (99 %) | 0 diff (100 %id) | |||
| DA405198 | thalamus | .b | 5713 to 6273 | 2 to 563 | capped | 562/562 (100 %) | 2 diff (99.7 %id) | ||
| DA571348 | whole embryo, mainly head | .b | 5715 to 6538 | 2 to 826 | capped | 825/835 (98 %) | 8 diff (99.1 %id) | ||
| CB128548 | cervix, Uterine | .b | 5844 to 6499 | 1 to 656 | 656/656 (100 %) | 1 diff (99.9 %id) | |||
| DA313067 | hippocampus | .b | 5851 to 6391 | 2 to 542 | capped | 541/541 (100 %) | 0 diff (100 %id) | ||
| DA122959 | cerebellum | .b | 5917 to 6479 | 2 to 564 | capped | 563/563 (100 %) | 1 diff (99.9 %id) | ||
| BX501365 | Liver | .b | 5974 to 6658 | 1 to 684 | 684/684 (100 %) | 1 diff (99.9 %id) | |||
| AK023534 | placenta | .b | 6000 to 8076 | 1 to 2076 | tiling clone, available from FLJ, | 2076/2076 (100 %) | 7 diff (99.7 %id) | ||
| AU136122 | placenta | .b | 6001 to 6699 | 2 to 712 | capped | 711/725 (98 %) | 20 diff (97.3 %id) | ||
| BU192686 | eye, retinoblastoma | .b | 6002 to 6905 | 11 to 918 | tiling clone, | 908/921 (98 %) | 6 diff (99.4 %id) | ||
| DA110688 | cerebellum | .b | 6071 to 6626 | 2 to 557 | capped | 556/556 (100 %) | 0 diff (100 %id) | ||
| DA184974 | amygdala | .b | 6077 to 6548 | 2 to 474 | capped | 473/473 (100 %) | 1 diff (99.8 %id) | ||
| DB241274 | trachea | .b | 6077 to 6672 | 2 to 597 | capped | 596/596 (100 %) | 0 diff (100 %id) | ||
| DB292416 | uterus | .b | 6106 to 6697 | 2 to 594 | capped | 593/593 (100 %) | 2 diff (99.7 %id) | ||
| DB323152 | .b | 6114 to 6652 | 540 to 1 | 540/540 (100 %) | 1 diff (99.9 %id) | ||||
| AW027776 | Kidney | .b | 6126 to 6345 | 220 to 1 | 220/220 (100 %) | 3 diff (98.7 %id) | |||
| DA794425 | brain | .b | 6143 to 6696 | 2 to 555 | capped | 554/554 (100 %) | 0 diff (100 %id) | ||
| AA766279 | germinal center B cell | .b | 6146 to 6661 | 514 to 1 | 514/517 (99 %) | 2 diff (99.7 %id) | |||
| DA454363 | tongue, tumor tissue | .b | 6147 to 6713 | 2 to 568 | capped | 567/567 (100 %) | 3 diff (99.5 %id) | ||
| AI570381 | poorly differentiated adenocarcinoma withsignet ring cell features, stomach | .b | 6162 to 6671 | 511 to 2 | 510/511 (99 %) | 0 diff (100 %id) | |||
| DA402480 | thalamus | .b | 6207 to 6773 | 2 to 568 | capped | 567/567 (100 %) | 0 diff (100 %id) | ||
| BX953365 | .b | 6259 to 6744 | 1 to 486 | 486/486 (100 %) | 2 diff (99.6 %id) | ||||
| DA774594 | brain | .b | 6302 to 6851 | 2 to 551 | capped | 550/551 (99 %) | 1 diff (99.9 %id) | ||
| DA959503 | Spleen | .b | 6302 to 6853 | 2 to 553 | capped | 552/552 (100 %) | 0 diff (100 %id) | ||
| DA186568 | amygdala | .b | 6391 to 6915 | 2 to 525 | capped | 524/524 (100 %) | 1 diff (99.9 %id) | ||
| DB287553 | uterus | .b | 6413 to 6879 | 2 to 468 | capped | 467/467 (100 %) | 0 diff (100 %id) | ||
| DA338286 | hippocampus | .b | 6418 to 7008 | 2 to 592 | capped | 591/591 (100 %) | 2 diff (99.7 %id) | ||
| DA098756 | cerebellum | .b | 6426 to 6966 | 2 to 542 | capped, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 541/541 (100 %) | 3 diff (99.5 %id) | |
| DA320991 | hippocampus | .b | 6437 to 7004 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
| DA318969 | hippocampus | .b | 6438 to 7020 | 2 to 582 | capped | 581/581 (100 %) | 2 diff (99.7 %id) | ||
| DA324574 | hippocampus | .b | 6443 to 6959 | 2 to 518 | capped | 517/517 (100 %) | 1 diff (99.9 %id) | ||
| DA019823 | .b | 6444 to 7015 | 2 to 573 | capped | 572/572 (100 %) | 3 diff (99.5 %id) | |||
| DA109176 | cerebellum | .b | 6459 to 7028 | 2 to 572 | capped | 571/571 (100 %) | 1 diff (99.9 %id) | ||
| DA333269 | hippocampus | .b | 6484 to 7034 | 2 to 552 | capped | 551/551 (100 %) | 1 diff (99.9 %id) | ||
| DA327632 | hippocampus | .b | 6498 to 7034 | 2 to 538 | capped | 537/537 (100 %) | 1 diff (99.9 %id) | ||
| DA335241 | hippocampus | .b | 6498 to 7090 | 2 to 594 | capped | 593/593 (100 %) | 0 diff (100 %id) | ||
| DA797536 | brain | .b | 6499 to 7034 | 2 to 538 | capped | 537/537 (100 %) | 1 diff (99.9 %id) | ||
| DB153667 | thymus | .b | 6499 to 7073 | 2 to 576 | capped | 575/575 (100 %) | 0 diff (100 %id) | ||
| DA221304 | brain | .b | 6500 to 6876 | 2 to 378 | capped | 377/377 (100 %) | 0 diff (100 %id) | ||
| BX507284 | Liver | .b | 6514 to 7202 | 1 to 689 | 689/689 (100 %) | 3 diff (99.6 %id) | |||
| DA122524 | cerebellum | .b | 6530 to 7034 | 2 to 506 | capped | 505/505 (100 %) | 0 diff (100 %id) | ||
| DB290195 | uterus | .b | 6657 to 7244 | 2 to 589 | tiling clone, capped | 588/588 (100 %) | 0 diff (100 %id) | ||
| DA105536 | cerebellum | .b | 6664 to 7233 | 2 to 570 | capped | 569/569 (100 %) | 1 diff (99.9 %id) | ||
| BX508106 | .b | 6726 to 7417 | 1 to 692 | 692/692 (100 %) | 6 diff (99.2 %id) | ||||
| DA862694 | placenta | .b | 6883 to 7453 | 2 to 573 | capped | 572/572 (100 %) | 1 diff (99.9 %id) | ||
| DA862733 | placenta | .b | 6883 to 7448 | 2 to 567 | capped | 566/566 (100 %) | 2 diff (99.7 %id) | ||
| DB143057 | thymus | .b | 6966 to 7476 | 2 to 511 | capped | 510/510 (100 %) | 1 diff (99.9 %id) | ||
| DA224535 | brain | .b | 6987 to 7544 | 2 to 560 | capped | 559/559 (100 %) | 1 diff (99.9 %id) | ||
| DB147639 | thymus | .b | 7009 to 7587 | 2 to 581 | capped | 580/580 (100 %) | 1 diff (99.9 %id) | ||
| BG392735 | embryonal carcinoma, cell line, testis | .b | 7011 to 7785 | 1 to 766 | 766/771 (99 %) | 17 diff (97.8 %id) | |||
| DB242659 | stomach, tumor tissue | .b | 7017 to 7563 | 2 to 549 | capped | 548/548 (100 %) | 1 diff (99.9 %id) | ||
| DA063533 | cerebellum | .b | 7042 to 7606 | 2 to 566 | capped | 565/565 (100 %) | 1 diff (99.9 %id) | ||
| ES313708 | beard hair, skin | .b | 7059 to 7461 | 1 to 405 | 405/405 (100 %) | 4 diff (99.1 %id) | |||
| DA774776 | brain | .b | 7120 to 7675 | 2 to 557 | capped | 556/556 (100 %) | 2 diff (99.7 %id) | ||
| DA452835 | tongue, tumor tissue | .b | 7201 to 7771 | 2 to 572 | capped | 571/571 (100 %) | 1 diff (99.9 %id) | ||
| AU145976 | whole embryo, mainly head | .b | 7222 to 7789 | 566 to 1 | 566/569 (99 %) | 12 diff (97.9 %id) | |||
| CN267218 | embryonic stem cells, cell lines H1, H7, andH9 | .b | 7226 to 7960 | 1 to 736 | 736/736 (100 %) | 2 diff (99.8 %id) | |||
| DB142553 | thymus | .b | 7252 to 7784 | 2 to 534 | capped | 533/533 (100 %) | 2 diff (99.7 %id) | ||
| BU934749 | mixed (pool of 40 RNAs) | .b | 7462 to 8080 | 1 to 620 | 620/624 (99 %) | 7 diff (98.9 %id) | |||
| CV572772 | cornea, eye | .b | 7482 to 8126 | 1 to 645 | 645/645 (100 %) | 0 diff (100 %id) | |||
| BG150264 | pooled germ cell tumors | .b | 7504 to 8075 | 574 to 2 | 573/574 (99 %) | 0 diff (100 %id) | |||
| BG150254 | pooled germ cell tumors | .b | 7509 to 8075 | 568 to 2 | 567/568 (99 %) | 0 diff (100 %id) | |||
| BM723587 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 7520 to 7689 | 1 to 170 | 170/170 (100 %) | 0 diff (100 %id) | |||
| BM930539 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 7520 to 7689 | 1 to 170 | 170/170 (100 %) | 0 diff (100 %id) | |||
| BG150545 | pooled germ cell tumors | .b | 7619 to 8075 | 458 to 2 | 457/458 (99 %) | 0 diff (100 %id) | |||
| DA515462 | brain | .b | 7670 to 8208 | 2 to 540 | tiling clone, capped | 539/539 (100 %) | 0 diff (100 %id) | ||
| AA626212 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 7672 to 7961 | 1 to 290 | Submitted on the opposite strand | 290/290 (100 %) | 0 diff (100 %id) | ||
| AU156500 | placenta | .b | 7712 to 8076 | 365 to 2 | 364/365 (99 %) | 0 diff (100 %id) | |||
| BG236402 | blood, lymphocyte | .b | 7754 to 8074 | 321 to 1 | 321/321 (100 %) | 3 diff (99.1 %id) | |||
| DA694424 | .b | 7854 to 8420 | 2 to 569 | capped | 568/568 (100 %) | 2 diff (99.7 %id) | |||
| DA530785 | brain | .b | 7855 to 8454 | 2 to 601 | capped | 600/600 (100 %) | 0 diff (100 %id) | ||
| AK025702 | .b | 7901 to 10312 | 1 to 2412 | tiling clone, available from FLJ, AAA | 2412/2412 (100 %) | 3 diff (99.9 %id) | |||
| R57895 | .b | 7960 to 8267 | 1 to 307 | 307/311 (98 %) | 4 diff (98.8 %id) | ||||
| DB195335 | trachea | .b | 8096 to 8604 | 2 to 511 | capped | 510/510 (100 %) | 4 diff (99.3 %id) | ||
| BX477896 | .b | 8365 to 8597 | 1 to 233 | 233/233 (100 %) | 1 diff (99.6 %id) | ||||
| DB192740 | ovary, tumor tissue | .b | 8408 to 8947 | 2 to 542 | capped | 541/541 (100 %) | 2 diff (99.7 %id) | ||
| DA077505 | cerebellum | .b | 8430 to 9006 | 2 to 579 | capped | 578/578 (100 %) | 1 diff (99.9 %id) | ||
| DA254303 | caudate nucleus | .b | 8477 to 8947 | 2 to 472 | capped | 471/480 (98 %) | 1 diff (99.8 %id) | ||
| DA348935 | substantia nigra | .b | 8478 to 8965 | 2 to 489 | capped | 488/488 (100 %) | 5 diff (99.0 %id) | ||
| CD673119 | eye, Iris | .b | 8495 to 8998 | 1 to 504 | 504/504 (100 %) | 0 diff (100 %id) | |||
| CN361049 | embryonic stem cells, DMSO-treated H9 cellline | .b | 8533 to 8753 | 1 to 221 | 221/221 (100 %) | 2 diff (99.1 %id) | |||
| BG696362 | skin | .b | 8545 to 9177 | 1 to 638 | 638/640 (99 %) | 12 diff (98.2 %id) | |||
| AI005169 | pooled | .b | 8556 to 9006 | 451 to 1 | 451/451 (100 %) | 4 diff (99.2 %id) | |||
| AA187548 | .b | 8580 to 8938 | 1 to 358 | 358/358 (100 %) | 1 diff (99.8 %id) | ||||
| BX473306 | .b | 8610 to 9321 | 1 to 710 | 710/710 (100 %) | 3 diff (99.6 %id) | ||||
| AW292898 | .b | 8610 to 9158 | 22 to 570 | AAA | Submitted on the opposite strand | 549/570 (96 %) | 6 diff (99.0 %id) | ||
| BM464423 | leiomyosarcoma, uterus | .b | 8622 to 9516 | 1 to 896 | 896/1006 (89 %) | 18 diff (98.3 %id) | |||
| BF370138 | prostate_normal | .b | 8625 to 8933 | 9 to 317 | 309/317 (97 %) | 1 diff (99.7 %id) | |||
| CX870035 | embryonic stem | .b | 8627 to 9306 | 1 to 680 | 680/680 (100 %) | 0 diff (100 %id) | |||
| BP432485 | .b | 8631 to 8999 | 1 to 370 | 370/370 (100 %) | 4 diff (99.0 %id) | ||||
| H86277 | eye, retina | .b | 8635 to 8982 | 1 to 348 | 348/348 (100 %) | 2 diff (99.5 %id) | |||
| BY795876 | eye | .b | 8641 to 9267 | 1 to 627 | 627/627 (100 %) | 0 diff (100 %id) | |||
| BM905170 | melanotic melanoma, skin | .b | 8646 to 9383 | 27 to 776 | 750/1036 (72 %) | 38 diff (96.4 %id) | |||
| BM695632 | eye, optic nerve | .b | 8656 to 9313 | 1 to 657 | fully sequenced, | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 657/657 (100 %) | 0 diff (100 %id) | |
| DA568870 | whole embryo, mainly head | .b | 8673 to 9496 | 2 to 834 | capped | 833/847 (98 %) | 17 diff (98.0 %id) | ||
| BI906258 | leukocyte | .b | 8680 to 9313 | 1 to 642 | 642/642 (100 %) | 9 diff (98.6 %id) | |||
| TI_57232139 | .b | 8680 to 9313 | 40 to 681 | 642/681 (94 %) | 6 diff (99.2 %id) | ||||
| BG779983 | adenocarcinoma, Prostate | .b | 8717 to 9308 | 40 to 636 | 597/636 (93 %) | 6 diff (99.1 %id) | |||
| W30680 | senescent fibroblast | .b | 8743 to 9008 | 1 to 266 | 266/266 (100 %) | 0 diff (100 %id) | |||
| BG109493 | Bone, osteosarcoma, cell line | .b | 8811 to 9548 | 1 to 737 | 737/914 (80 %) | 25 diff (97.3 %id) | |||
| AA248453 | .b | 8882 to 9051 | 1 to 170 | 170/170 (100 %) | 4 diff (97.7 %id) | ||||
| BM973037 | lung | .b | 8911 to 9607 | 8 to 704 | Submitted on the opposite strand | 697/704 (99 %) | 9 diff (98.8 %id) | ||
| DT216986 | brain | .b | 8939 to 9607 | 1 to 668 | 668/668 (100 %) | 2 diff (99.8 %id) | |||
| Z45850 | brain, total brain | .b | 8959 to 9283 | 1 to 325 | 325/325 (100 %) | 1 diff (99.7 %id) | |||
| AA625186 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 8978 to 9412 | 1 to 434 | 434/434 (100 %) | 16 diff (96.4 %id) | |||
| CA395517 | eye, RPE/choroid | .b | 9001 to 9640 | 1 to 640 | 640/640 (100 %) | 0 diff (100 %id) | |||
| CA395531 | eye, RPE/choroid | .b | 9001 to 9607 | 1 to 609 | 609/609 (100 %) | 3 diff (99.6 %id) | |||
| BG115990 | duodenal adenocarcinoma, cell line, small intestine | .b | 9020 to 9790 | 1 to 773 | 773/1079 (71 %) | 41 diff (96.3 %id) | |||
| BG116428 | duodenal adenocarcinoma, cell line, small intestine | .b | 9021 to 9742 | 1 to 714 | 714/950 (75 %) | 22 diff (97.7 %id) | |||
| AA625265 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 9031 to 9440 | 1 to 409 | 409/409 (100 %) | 1 diff (99.8 %id) | |||
| CN361050 | embryonic stem cells, DMSO-treated H9 cellline | .b | 9095 to 9707 | 9 to 621 | 613/621 (98 %) | 6 diff (99.1 %id) | |||
| TI_154094771 | .b | 9220 to 9763 | 655 to 114 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 542/1193 (45 %) | 31 diff (97.5 %id) | ||
| AA326458 | brain, cerebellum | .b | 9226 to 9595 | 1 to 375 | 375/375 (100 %) | 6 diff (98.4 %id) | |||
| AW964746 | .b | 9227 to 9727 | 1 to 501 | 501/501 (100 %) | 1 diff (99.9 %id) | ||||
| AW051568 | pooled | .b | 9266 to 9763 | 508 to 11 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 498/498 (100 %) | 0 diff (100 %id) | |
| AW243482 | Kidney | .b | 9266 to 9765 | 500 to 1 | 500/500 (100 %) | 3 diff (99.4 %id) | |||
| AA233675 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 9270 to 9661 | 1 to 393 | 393/393 (100 %) | 1 diff (99.8 %id) | |||
| AI760977 | 2 pooled tumors (clear cell type), Kidney | .b | 9272 to 9767 | 503 to 8 | 496/503 (98 %) | 0 diff (100 %id) | |||
| BM666518 | eye, optic nerve | .b | 9283 to 9759 | 495 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 477/477 (100 %) | 1 diff (99.8 %id) | |
| AW364758 | denis_drash | .b | 9289 to 9909 | 1 to 620 | 620/625 (99 %) | 6 diff (99.1 %id) | |||
| BG112959 | Bone, osteosarcoma, cell line | .b | 9307 to 10067 | 1 to 757 | 757/798 (94 %) | 15 diff (98.2 %id) | |||
| AI051555 | liver and spleen | .b | 9330 to 9761 | 431 to 1 | 431/431 (100 %) | 1 diff (99.8 %id) | |||
| AI056518 | liver and spleen | .b | 9331 to 9761 | 431 to 2 | 430/431 (99 %) | 0 diff (100 %id) | |||
| CA436598 | Bone, Subchondral Bone | .b | 9345 to 9763 | 437 to 19 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 419/419 (100 %) | 3 diff (99.3 %id) | |
| N99253 | senescent fibroblast | .b | 9362 to 9761 | 400 to 5 | 396/400 (99 %) | 0 diff (100 %id) | |||
| FN111144 | breast carcinoma | .b | 9420 to 9522 | 103 to 1 | Submitted on the opposite strand | 103/104 (99 %) | 0 diff (100 %id) | ||
| BI222957 | cervical carcinoma cell line, cervix | .b | 9439 to 10132 | 1 to 696 | 696/696 (100 %) | 2 diff (99.8 %id) | |||
| FN050605 | breast carcinoma | .b | 9450 to 9550 | 1 to 101 | 101/101 (100 %) | 0 diff (100 %id) | |||
| AA256223 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 9481 to 9940 | 1 to 460 | fully sequenced, | 460/460 (100 %) | 1 diff (99.8 %id) | ||
| BE504939 | pooled germ cell tumors | .b | 9555 to 9763 | 212 to 4 | 209/212 (98 %) | 0 diff (100 %id) | |||
| FN169986 | breast carcinoma | .b | 9596 to 9697 | 101 to 1 | Submitted on the opposite strand | 101/101 (100 %) | 1 diff (99.1 %id) | ||
| BM505742 | insulinoma, Pancreas | .b | 9607 to 9972 | 8 to 373 | 366/373 (98 %) | 6 diff (98.4 %id) | |||
| N49355 | multiple sclerosis lesions | .b | 9648 to 9819 | 1 to 172 | 172/172 (100 %) | 1 diff (99.5 %id) | |||
| BQ773097 | Chondrosarcoma Cell line | .b | 9669 to 10312 | 662 to 19 | AAA | 644/644 (100 %) | 0 diff (100 %id) | ||
| FN105123 | breast carcinoma | .b | 9670 to 9770 | 103 to 1 | Submitted on the opposite strand | 103/104 (99 %) | 2 diff (98.1 %id) | ||
| BF851031 | lung_normal | .b | 9685 to 10088 | 410 to 7 | Submitted on the opposite strand | 404/410 (98 %) | 0 diff (100 %id) | ||
| TI_149277724 | .b | 9687 to 10312 | 752 to 128 | AAA | 625/629 (99 %) | 14 diff (97.8 %id) | |||
| BQ029344 | lung, Metastatic Chondrosarcoma | .b | 9716 to 10307 | 610 to 19 | AAA | 592/592 (100 %) | 0 diff (100 %id) | ||
| DB355443 | whole embryo, mainly head | .b | 9761 to 10312 | 553 to 1 | 553/553 (100 %) | 16 diff (97.2 %id) | |||
| AW292751 | .b | 9762 to 10307 | 562 to 18 | AAA | 545/545 (100 %) | 1 diff (99.9 %id) | |||
| BP395423 | pancreatic islet | .b | 9764 to 10190 | 429 to 1 | 429/442 (97 %) | 8 diff (98.2 %id) | |||
| BP397981 | pancreatic islet | .b | 9764 to 10142 | 380 to 1 | 380/395 (96 %) | 5 diff (98.8 %id) | |||
| BF056953 | pooled germ cell tumors | .b | 9774 to 10310 | 541 to 5 | 537/541 (99 %) | 0 diff (100 %id) | |||
| DB348043 | trachea | .b | 9775 to 10312 | 538 to 1 | 538/540 (99 %) | 2 diff (99.7 %id) | |||
| BE702267 | nervous_normal | .b | 9782 to 10207 | 427 to 3 | 425/427 (99 %) | 0 diff (100 %id) | |||
| AW243103 | Kidney | .b | 9785 to 10312 | 538 to 11 | AAA | 528/528 (100 %) | 1 diff (99.9 %id) | ||
| AW117241 | pooled | .b | 9804 to 10313 | 510 to 1 | 510/510 (100 %) | 0 diff (100 %id) | |||
| BE702273 | nervous_normal | .b | 9805 to 10200 | 414 to 20 | 395/414 (95 %) | 0 diff (100 %id) | |||
| AI652900 | pooled germ cell tumors | .b | 9808 to 10314 | 507 to 1 | 507/507 (100 %) | 0 diff (100 %id) | |||
| AI972894 | Prostate | .b | 9808 to 10313 | 506 to 1 | 506/506 (100 %) | 0 diff (100 %id) | |||
| AW236568 | pooled germ cell tumors | .b | 9832 to 10314 | 483 to 1 | 483/483 (100 %) | 0 diff (100 %id) | |||
| D31036 | .b | 9833 to 10075 | 1 to 242 | 242/242 (100 %) | 1 diff (99.6 %id) | ||||
| BE677310 | dorsal root ganglia | .b | 9839 to 10310 | 472 to 1 | 472/472 (100 %) | 0 diff (100 %id) | |||
| AA789085 | germinal center B cell | .b | 9841 to 10315 | 481 to 7 | tiling clone, | 475/481 (98 %) | 0 diff (100 %id) | ||
| AA744386 | germinal center B cell | .b | 9842 to 10307 | 483 to 18 | AAA | 466/466 (100 %) | 0 diff (100 %id) | ||
| AA780224 | .b | 9844 to 10315 | 473 to 2 | 472/473 (99 %) | 0 diff (100 %id) | ||||
| AW661967 | 2 pooled high-grade transitional celltumors, genitourinary tract | .b | 9845 to 10313 | 469 to 1 | 469/469 (100 %) | 0 diff (100 %id) | |||
| AI041736 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 9856 to 10307 | 452 to 1 | 452/452 (100 %) | 1 diff (99.8 %id) | |||
| AI335732 | uterus | .b | 9856 to 10307 | 452 to 1 | 452/452 (100 %) | 1 diff (99.8 %id) | |||
| BM931749 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 9856 to 10307 | 1 to 452 | fully sequenced, AAA | 452/452 (100 %) | 0 diff (100 %id) | ||
| N36167 | melanocyte | .b | 9858 to 10312 | 457 to 1 | 457/457 (100 %) | 2 diff (99.6 %id) | |||
| BQ021862 | placenta | .b | 9858 to 10307 | 467 to 18 | AAA | 450/450 (100 %) | 0 diff (100 %id) | ||
| AW084973 | esophagus, squamous cell carcinoma | .b | 9862 to 10307 | 459 to 14 | AAA | 446/446 (100 %) | 2 diff (99.6 %id) | ||
| FN087777 | breast carcinoma | .b | 9873 to 9977 | 1 to 103 | 103/104 (99 %) | 3 diff (97.2 %id) | |||
| AW169242 | moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus | .b | 9874 to 10307 | 452 to 19 | AAA | 434/434 (100 %) | 1 diff (99.8 %id) | ||
| AI377291 | pooled | .b | 9875 to 10315 | 442 to 2 | 441/442 (99 %) | 0 diff (100 %id) | |||
| AA564725 | germ cell tumor | .b | 9879 to 10307 | 429 to 1 | 429/429 (100 %) | 0 diff (100 %id) | |||
| AI500294 | anaplastic oligodendroglioma, brain | .b | 9881 to 10307 | 447 to 21 | AAA | 427/427 (100 %) | 3 diff (99.3 %id) | ||
| AA233563 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 9893 to 10312 | 420 to 1 | 420/420 (100 %) | 0 diff (100 %id) | |||
| AI659126 | Prostate | .b | 9898 to 10312 | 415 to 1 | 415/415 (100 %) | 0 diff (100 %id) | |||
| AA256165 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 9910 to 10307 | 398 to 1 | fully sequenced, | 398/398 (100 %) | 1 diff (99.8 %id) | ||
| AI168095 | parathyroid gland, parathyroid tumor | .b | 9912 to 10315 | 409 to 6 | 404/409 (98 %) | 0 diff (100 %id) | |||
| AA760919 | germinal center B cell | .b | 9916 to 10307 | 409 to 18 | AAA | 392/392 (100 %) | 2 diff (99.5 %id) | ||
| H86278 | eye, retina | .b | 9935 to 10180 | 245 to 1 | 245/249 (98 %) | 2 diff (99.2 %id) | |||
| AI143459 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 9942 to 10312 | 386 to 16 | AAA | 371/371 (100 %) | 1 diff (99.8 %id) | ||
| AI720468 | colon | .b | 9943 to 10312 | 370 to 1 | 370/370 (100 %) | 6 diff (98.4 %id) | |||
| AI702920 | Kidney | .b | 9975 to 10310 | 340 to 3 | 338/340 (99 %) | 0 diff (100 %id) | |||
| AA783047 | .b | 9992 to 10315 | 326 to 2 | 325/326 (99 %) | 0 diff (100 %id) | ||||
| Z41487 | brain, total brain | .b | 10002 to 10312 | 311 to 1 | 311/311 (100 %) | 0 diff (100 %id) | |||
| BM505504 | insulinoma, Pancreas | .b | 10036 to 10312 | 305 to 29 | AAA | 277/277 (100 %) | 1 diff (99.7 %id) | ||
| AI475293 | colon, moderately-differentiated adenocarcinoma | .b | 10048 to 10312 | 291 to 27 | AAA | 265/265 (100 %) | 1 diff (99.7 %id) | ||
| AA894477 | metastatic prostate bone lesion | .b | 10057 to 10312 | 1 to 256 | AAA | 256/256 (100 %) | 2 diff (99.3 %id) | ||
| BM675546 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 10066 to 10307 | 260 to 19 | fully sequenced, AAA | 242/242 (100 %) | 0 diff (100 %id) | ||
| AA552626 | colon, tumor | .b | 10208 to 10306 | 99 to 1 | 99/99 (100 %) | 1 diff (99.0 %id) | |||
| FN114440 | breast carcinoma | .b | 10236 to 10304 | 69 to 2 | Submitted on the opposite strand | 68/69 (98 %) | 0 diff (100 %id) | ||
| AJ295991 | .c | 1 to 5090 | 1 to 5089 | G829E | tiling clone, AAA | 5089/5089 (100 %) | 7 diff (99.9 %id) | ||
| TI_154131910 | .c | 4234 to 5096 | 941 to 90 | tiling clone, AAA | 852/971 (87 %) | 18 diff (98.2 %id) | |||
| AF332468 | .d | 1 to 3995 | 1 to 3995 | exact | tiling clone, | 3995/3995 (100 %) | 0 diff (100 %id) | ||
| NM_017778.2 | .d | 1 to 3995 | 1 to 3995 | exact | RefSeq, | 3995/3995 (100 %) | 0 diff (100 %id) | ||
| BC012059 | Uterus, leiomyosarcoma | .d | 33 to 2848 | 1 to 2816 | exact | available from MGC, AAA | 2816/2816 (100 %) | 0 diff (100 %id) | |
| DA735617 | .d | 43 to 650 | 2 to 609 | capped | 608/608 (100 %) | 16 diff (97.4 %id) | |||
| BC062631 | Brain, fetal, whole pooled | .d | 62 to 3082 | 1 to 3021 | exact | available from MGC, AAA | 3021/3021 (100 %) | 0 diff (100 %id) | |
| AJ295992 | .d | 206 to 3995 | 1 to 3790 | exact | 3790/3790 (100 %) | 0 diff (100 %id) | |||
| AK022560 | .d | 324 to 3613 | 1 to 3290 | exact | available from FLJ, | 3290/3290 (100 %) | 0 diff (100 %id) | ||
| TI_1948095449 | .d | 519 to 1591 | 137 to 1208 | 1072/1349 (79 %) | 72 diff (94.7 %id) | ||||
| TI_1948095597 | .d | 519 to 1437 | 137 to 1053 | 917/1320 (69 %) | 31 diff (97.7 %id) | ||||
| TI_1948095750 | .d | 519 to 1430 | 140 to 1049 | 910/1347 (67 %) | 19 diff (98.6 %id) | ||||
| TI_1948095903 | .d | 519 to 1582 | 137 to 1185 | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 1049/1323 (79 %) | 60 diff (95.5 %id) | |||
| AU310214 | neuroblastoma | .d | 1174 to 1755 | 1 to 583 | 583/583 (100 %) | 1 diff (99.9 %id) | |||
| AU138209 | placenta | .d | 1290 to 1978 | 2 to 693 | capped | 692/692 (100 %) | 4 diff (99.5 %id) | ||
| TI_1948095751 | .d | 1643 to 2455 | 947 to 125 | 823/1306 (63 %) | 17 diff (98.7 %id) | ||||
| TI_1948095904 | .d | 1691 to 2455 | 889 to 122 | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 768/1267 (60 %) | 8 diff (99.4 %id) | |||
| AK000360 | .d | 1702 to 3994 | 1 to 2294 | available from FLJ, AAA | 2294/2294 (100 %) | 3 diff (99.9 %id) | |||
| TI_1948095598 | .d | 1767 to 2455 | 833 to 140 | 694/1316 (52 %) | 9 diff (99.4 %id) | ||||
| H09421 | whole brain | .d | 1803 to 2172 | 1 to 381 | 381/437 (87 %) | 29 diff (93.4 %id) | |||
| AA129667 | lung, lung carcinoma | .d | 1810 to 2176 | 1 to 364 | 364/366 (99 %) | 9 diff (97.6 %id) | |||
| TI_1948095450 | .d | 1823 to 2455 | 781 to 143 | 639/1366 (46 %) | 8 diff (99.5 %id) | ||||
| CB216161 | normal endometrium, mid-secretory phase,cycle day 23, uterus | .d | 1827 to 2437 | 1 to 611 | 611/611 (100 %) | 0 diff (100 %id) | |||
| AU134464 | ovary, tumor tissue | .d | 1853 to 2479 | 2 to 628 | capped | 627/627 (100 %) | 1 diff (99.9 %id) | ||
| BU528365 | epidermoid carcinoma, cell line, lung | .d | 1874 to 2783 | 1 to 913 | 913/915 (99 %) | 17 diff (98.2 %id) | |||
| AA121248 | .d | 2032 to 2483 | 1 to 462 | 462/462 (100 %) | 10 diff (97.9 %id) | ||||
| DB025511 | testis | .d | 2058 to 2610 | 2 to 554 | capped | 553/553 (100 %) | 2 diff (99.7 %id) | ||
| CA430322 | cell lines, Chondrosarcoma | .d | 2140 to 2848 | 727 to 19 | AAA | 709/709 (100 %) | 3 diff (99.6 %id) | ||
| BE882069 | leiomyosarcoma, uterus | .d | 2154 to 2735 | 1 to 582 | 582/959 (60 %) | 6 diff (99.4 %id) | |||
| AA292324 | ovarian tumor, ovary | .d | 2155 to 2655 | 1 to 501 | fully sequenced, | 501/501 (100 %) | 0 diff (100 %id) | ||
| BF926315 | nervous_tumor | .d | 2156 to 2526 | 372 to 1 | Submitted on the opposite strand | 372/372 (100 %) | 2 diff (99.5 %id) | ||
| DN915599 | .d | 2194 to 2739 | 1 to 543 | 543/543 (100 %) | 4 diff (99.3 %id) | ||||
| DN920419 | .d | 2194 to 2561 | 1 to 368 | 368/368 (100 %) | 1 diff (99.8 %id) | ||||
| DA519719 | brain | .d | 2231 to 2786 | 2 to 556 | capped | 555/555 (100 %) | 1 diff (99.9 %id) | ||
| BM930449 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 2268 to 2854 | 1 to 587 | fully sequenced, AAA | 587/587 (100 %) | 1 diff (99.9 %id) | ||
| AI764984 | Kidney | .d | 2273 to 2850 | 580 to 7 | 574/580 (98 %) | 1 diff (99.9 %id) | |||
| AI769473 | 2 pooled tumors (clear cell type), Kidney | .d | 2273 to 2850 | 584 to 7 | 578/584 (98 %) | 1 diff (99.9 %id) | |||
| AW450770 | .d | 2308 to 2851 | 558 to 15 | AAA | 544/544 (100 %) | 3 diff (99.5 %id) | |||
| BU743127 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 2336 to 2854 | 537 to 19 | fully sequenced, AAA | 519/519 (100 %) | 0 diff (100 %id) | ||
| FN168050 | breast carcinoma | .d | 2342 to 2425 | 1 to 85 | 83/93 (89 %) | 2 diff (97.9 %id) | |||
| AI627695 | Kidney | .d | 2383 to 2848 | 466 to 1 | 466/466 (100 %) | 0 diff (100 %id) | |||
| BX453634 | fetal liver, Liver | .d | 2385 to 3311 | 931 to 6 | 926/935 (99 %) | 0 diff (100 %id) | |||
| AI613054 | Kidney | .d | 2390 to 2848 | 459 to 1 | 459/459 (100 %) | 0 diff (100 %id) | |||
| BU594835 | mixed (pool of 40 RNAs) | .d | 2411 to 3230 | 1 to 833 | 833/834 (99 %) | 26 diff (96.9 %id) | |||
| AI623876 | adenocarcinoma, Pancreas | .d | 2432 to 2848 | 438 to 22 | AAA | 417/417 (100 %) | 0 diff (100 %id) | ||
| AA830714 | germinal center B cell | .d | 2445 to 2848 | 433 to 30 | AAA | 404/404 (100 %) | 0 diff (100 %id) | ||
| DT220499 | brain | .d | 2488 to 3023 | 1 to 536 | 536/536 (100 %) | 1 diff (99.9 %id) | |||
| CR743364 | melanocyte | .d | 2526 to 3218 | 1 to 693 | 693/693 (100 %) | 1 diff (99.9 %id) | |||
| BX114741 | lung | .d | 2566 to 3039 | 1 to 476 | 476/476 (100 %) | 7 diff (98.6 %id) | |||
| F07660 | brain, total brain | .d | 2573 to 2852 | 1 to 280 | 280/280 (100 %) | 2 diff (99.3 %id) | |||
| Z45913 | brain, total brain | .d | 2573 to 2857 | 1 to 285 | 285/285 (100 %) | 1 diff (99.7 %id) | |||
| BI016620 | lung_tumor | .d | 2579 to 2960 | 418 to 31 | 388/450 (86 %) | 0 diff (100 %id) | |||
| W21458 | lung | .d | 2602 to 2822 | 1 to 222 | 222/227 (97 %) | 7 diff (97.0 %id) | |||
| AA477044 | ovarian tumor, ovary | .d | 2604 to 3051 | 1 to 438 | 438/438 (100 %) | 10 diff (97.8 %id) | |||
| AA235469 | ovarian tumor, ovary | .d | 2625 to 2824 | 200 to 1 | fully sequenced, | 200/200 (100 %) | 3 diff (98.5 %id) | ||
| AA810307 | germinal center B cell | .d | 2649 to 3059 | 1 to 411 | Submitted on the opposite strand | 411/411 (100 %) | 3 diff (99.3 %id) | ||
| N91219 | liver and spleen | .d | 2650 to 2833 | 1 to 184 | 184/184 (100 %) | 0 diff (100 %id) | |||
| AA286863 | germinal center B cell | .d | 2655 to 2848 | 212 to 19 | AAA | Submitted on the opposite strand | 194/194 (100 %) | 0 diff (100 %id) | |
| BE502984 | carcinoid, lung | .d | 2657 to 3165 | 1 to 509 | Submitted on the opposite strand | 509/509 (100 %) | 0 diff (100 %id) | ||
| BG009218 | placenta_normal | .d | 2664 to 2973 | 310 to 1 | 310/310 (100 %) | 2 diff (99.4 %id) | |||
| CB143886 | Liver | .d | 2700 to 3104 | 12 to 415 | 404/415 (97 %) | 6 diff (98.6 %id) | |||
| BQ310592 | breast | .d | 2725 to 2912 | 1 to 186 | 186/186 (100 %) | 2 diff (99.0 %id) | |||
| CA947140 | Pancreas, Purified pancreatic islet | .d | 2732 to 3064 | 28 to 360 | 333/360 (92 %) | 6 diff (98.4 %id) | |||
| BQ310593 | breast | .d | 2741 to 3337 | 596 to 5 | 592/597 (99 %) | 0 diff (100 %id) | |||
| TI_149308680 | .d | 2741 to 3614 | 65 to 934 | Submitted on the opposite strand | 870/1057 (82 %) | 12 diff (98.9 %id) | |||
| BM979851 | lung, Primary Lung Epithelial Cells | .d | 2748 to 3527 | 1 to 778 | Submitted on the opposite strand | 778/778 (100 %) | 3 diff (99.7 %id) | ||
| AA953708 | carcinoid, lung | .d | 2762 to 3128 | 1 to 367 | Submitted on the opposite strand | 367/367 (100 %) | 0 diff (100 %id) | ||
| AI796924 | carcinoid, lung | .d | 2762 to 3110 | 1 to 349 | Submitted on the opposite strand | 349/350 (99 %) | 1 diff (99.8 %id) | ||
| TI_154038979 | .d | 2793 to 3593 | 851 to 66 | AAA | 786/788 (99 %) | 21 diff (97.4 %id) | |||
| EB361100 | eye, lens | .d | 2823 to 3349 | 527 to 1 | 527/529 (99 %) | 2 diff (99.7 %id) | |||
| AW016296 | .d | 2838 to 3130 | 1 to 290 | Submitted on the opposite strand | 290/304 (95 %) | 7 diff (97.7 %id) | |||
| BQ775470 | Bone, Human Chondrosarcoma Cell Line | .d | 2842 to 3613 | 787 to 19 | AAA | 769/775 (99 %) | 6 diff (99.3 %id) | ||
| TI_149314734 | .d | 2843 to 3613 | 833 to 84 | AAA | 750/903 (83 %) | 30 diff (96.7 %id) | |||
| AA035078 | uterus | .d | 2847 to 3239 | 1 to 393 | 393/393 (100 %) | 0 diff (100 %id) | |||
| Z19297 | leg muscle, skeletal muscle | .d | 2849 to 3152 | 1 to 304 | 304/309 (98 %) | 2 diff (99.4 %id) | |||
| AI281955 | carcinoid, lung | .d | 2851 to 3100 | 1 to 250 | Submitted on the opposite strand | 250/250 (100 %) | 1 diff (99.6 %id) | ||
| BE673712 | carcinoid, lung | .d | 2854 to 3099 | 1 to 246 | Submitted on the opposite strand | 246/246 (100 %) | 0 diff (100 %id) | ||
| BF196134 | carcinoid, lung | .d | 2854 to 3099 | 1 to 246 | Submitted on the opposite strand | 246/246 (100 %) | 1 diff (99.6 %id) | ||
| BE348545 | carcinoid, lung | .d | 2860 to 3100 | 1 to 241 | Submitted on the opposite strand | 241/241 (100 %) | 0 diff (100 %id) | ||
| BE467254 | carcinoid, lung | .d | 2860 to 3100 | 1 to 241 | Submitted on the opposite strand | 241/241 (100 %) | 0 diff (100 %id) | ||
| BQ006521 | Chondrosarcoma, Left Pelvis | .d | 2871 to 3613 | 757 to 19 | AAA | 739/739 (100 %) | 5 diff (99.4 %id) | ||
| FN135118 | breast carcinoma | .d | 2894 to 3002 | 109 to 1 | Submitted on the opposite strand | 109/109 (100 %) | 0 diff (100 %id) | ||
| TI_149278492 | .d | 2907 to 3615 | 780 to 72 | AAA | 709/710 (99 %) | 1 diff (99.9 %id) | |||
| TI_149294038 | .d | 2919 to 3613 | 775 to 83 | AAA | 693/694 (99 %) | 2 diff (99.8 %id) | |||
| BM969339 | lung, Primary Lung Epithelial Cells | .d | 2927 to 3615 | 700 to 12 | AAA | 689/689 (100 %) | 1 diff (99.9 %id) | ||
| BM984957 | lung | .d | 2943 to 3613 | 688 to 19 | AAA | 670/673 (99 %) | 1 diff (99.9 %id) | ||
| AA455414 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .d | 2955 to 3371 | 1 to 412 | fully sequenced, | 412/412 (100 %) | 9 diff (97.9 %id) | ||
| CA413567 | Chondrosarcoma Grade II, Left Pelvis | .d | 3004 to 3613 | 628 to 19 | AAA | 610/610 (100 %) | 2 diff (99.7 %id) | ||
| AL134876 | melanoma (MeWo cell line) | .d | 3007 to 3613 | 1 to 607 | AAA | 607/607 (100 %) | 0 diff (100 %id) | ||
| AA133375 | lung, lung carcinoma | .d | 3009 to 3614 | 599 to 1 | 599/600 (99 %) | 12 diff (98.0 %id) | |||
| TI_151732862 | .d | 3010 to 3613 | 684 to 81 | AAA | 604/973 (62 %) | 5 diff (99.5 %id) | |||
| FN067098 | breast carcinoma | .d | 3013 to 3107 | 1 to 98 | 98/108 (90 %) | 4 diff (96.3 %id) | |||
| CA445018 | lung, Metastatic Chondrosarcoma | .d | 3013 to 3593 | 600 to 19 | AAA | 582/582 (100 %) | 1 diff (99.9 %id) | ||
| CB163016 | Liver | .d | 3017 to 3305 | 1 to 291 | 291/291 (100 %) | 4 diff (98.7 %id) | |||
| BQ186962 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 3017 to 3613 | 1 to 599 | fully sequenced, AAA | 599/599 (100 %) | 3 diff (99.5 %id) | ||
| N93417 | lung | .d | 3018 to 3614 | 608 to 2 | 607/608 (99 %) | 0 diff (100 %id) | |||
| BE888163 | leiomyosarcoma, uterus | .d | 3041 to 3608 | 1 to 569 | AAA | 569/569 (100 %) | 1 diff (99.9 %id) | ||
| CA444322 | lung, Metastatic Chondrosarcoma | .d | 3058 to 3613 | 574 to 19 | AAA | 556/557 (99 %) | 1 diff (99.9 %id) | ||
| CB306248 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .d | 3062 to 3613 | 569 to 19 | AAA | 551/551 (100 %) | 2 diff (99.7 %id) | ||
| AW104977 | pooled | .d | 3074 to 3596 | 540 to 1 | 540/561 (96 %) | 20 diff (96.5 %id) | |||
| DB367925 | .d | 3087 to 3613 | 529 to 1 | 529/537 (98 %) | 16 diff (97.1 %id) | ||||
| DB377832 | placenta | .d | 3087 to 3602 | 516 to 1 | 516/561 (91 %) | 10 diff (98.3 %id) | |||
| BQ021753 | lung, Metastatic Chondrosarcoma | .d | 3099 to 3604 | 514 to 8 | 507/521 (97 %) | 0 diff (100 %id) | |||
| BE897200 | melanotic melanoma, skin | .d | 3102 to 3593 | 1 to 492 | AAA | 492/492 (100 %) | 0 diff (100 %id) | ||
| AI984081 | four pooled poorly-differentiatedadenocarcinomas, lung | .d | 3125 to 3602 | 491 to 11 | AAA | 481/481 (100 %) | 3 diff (99.4 %id) | ||
| AW316629 | brain, three pooled meningiomas | .d | 3126 to 3614 | 490 to 2 | 489/490 (99 %) | 0 diff (100 %id) | |||
| BQ189651 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 3127 to 3613 | 1 to 487 | AAA | 487/487 (100 %) | 2 diff (99.6 %id) | ||
| TI_151734471 | .d | 3128 to 3613 | 564 to 79 | AAA | 486/978 (49 %) | 0 diff (100 %id) | |||
| AW275804 | lung, two pooled squamous cell carcinomas | .d | 3135 to 3613 | 481 to 1 | 481/481 (100 %) | 2 diff (99.6 %id) | |||
| AI417520 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .d | 3138 to 3602 | 476 to 12 | AAA | 465/465 (100 %) | 0 diff (100 %id) | ||
| AA121249 | .d | 3139 to 3612 | 482 to 1 | 482/482 (100 %) | 11 diff (97.8 %id) | ||||
| BM688428 | eye, human retina | .d | 3153 to 3614 | 506 to 45 | Submitted on the opposite strand | 462/506 (91 %) | 0 diff (100 %id) | ||
| AI470244 | pooled | .d | 3161 to 3613 | 467 to 15 | AAA | 453/453 (100 %) | 1 diff (99.8 %id) | ||
| BF003093 | Prostate | .d | 3161 to 3613 | 453 to 1 | 453/453 (100 %) | 0 diff (100 %id) | |||
| AV712745 | .d | 3197 to 3620 | 1 to 424 | 424/538 (78 %) | 5 diff (99.1 %id) | ||||
| AW662853 | pooled | .d | 3218 to 3614 | 401 to 5 | 397/401 (99 %) | 0 diff (100 %id) | |||
| AA725597 | .d | 3224 to 3614 | 395 to 5 | 391/395 (98 %) | 0 diff (100 %id) | ||||
| AA732779 | .d | 3234 to 3596 | 363 to 1 | 363/363 (100 %) | 0 diff (100 %id) | ||||
| DN920418 | .d | 3234 to 3613 | 381 to 2 | 380/381 (99 %) | 0 diff (100 %id) | ||||
| H94651 | liver and spleen | .d | 3234 to 3614 | 384 to 4 | 381/384 (99 %) | 0 diff (100 %id) | |||
| AA705837 | .d | 3235 to 3596 | 362 to 1 | 362/362 (100 %) | 0 diff (100 %id) | ||||
| CK005701 | brain/CNS, Human Brain - Frontal Cortex | .d | 3237 to 3862 | 1 to 625 | 625/634 (98 %) | 3 diff (99.6 %id) | |||
| AI245374 | Kidney | .d | 3244 to 3614 | 373 to 3 | 371/373 (99 %) | 0 diff (100 %id) | |||
| AW138278 | .d | 3258 to 3613 | 373 to 18 | AAA | 356/356 (100 %) | 1 diff (99.8 %id) | |||
| BQ189161 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 3258 to 3613 | 11 to 366 | fully sequenced, AAA | 356/366 (97 %) | 6 diff (98.4 %id) | ||
| TI_151731421 | .d | 3258 to 3613 | 439 to 84 | AAA | 356/952 (37 %) | 0 diff (100 %id) | |||
| FN079015 | breast carcinoma | .d | 3262 to 3328 | 1 to 67 | 67/68 (98 %) | 1 diff (98.6 %id) | |||
| FN069539 | breast carcinoma | .d | 3264 to 3324 | 61 to 1 | Submitted on the opposite strand | 61/61 (100 %) | 1 diff (98.4 %id) | ||
| AW612807 | carcinoid, lung | .d | 3272 to 3612 | 343 to 1 | 343/343 (100 %) | 2 diff (99.5 %id) | |||
| AW193298 | adenocarcinoma, Pancreas | .d | 3274 to 3614 | 349 to 9 | 341/349 (97 %) | 0 diff (100 %id) | |||
| AI766705 | B-cell, chronic lymphotic leukemia | .d | 3296 to 3613 | 336 to 19 | AAA | 318/318 (100 %) | 9 diff (97.2 %id) | ||
| CK299336 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 3298 to 3613 | 334 to 19 | fully sequenced, AAA | 316/316 (100 %) | 0 diff (100 %id) | ||
| CK300039 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .d | 3299 to 3613 | 333 to 19 | fully sequenced, AAA | 315/315 (100 %) | 1 diff (99.7 %id) | ||
| FN165523 | breast carcinoma | .d | 3309 to 3406 | 107 to 10 | Submitted on the opposite strand | 98/107 (91 %) | 0 diff (100 %id) | ||
| FN107403 | breast carcinoma | .d | 3322 to 3388 | 65 to 1 | Submitted on the opposite strand | 65/68 (95 %) | 2 diff (97.1 %id) | ||
| AA456052 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .d | 3341 to 3615 | 275 to 1 | fully sequenced, | 275/275 (100 %) | 0 diff (100 %id) | ||
| AA626934 | .d | 3347 to 3614 | 271 to 4 | 268/271 (98 %) | 0 diff (100 %id) | ||||
| AI636294 | Kidney | .d | 3349 to 3608 | 265 to 5 | 261/265 (98 %) | 0 diff (100 %id) | |||
| AA035495 | uterus | .d | 3360 to 3614 | 259 to 4 | 256/265 (96 %) | 0 diff (100 %id) | |||
| H09072 | whole brain | .d | 3389 to 3613 | 244 to 19 | AAA | 226/227 (99 %) | 6 diff (97.4 %id) | ||
| AU310215 | neuroblastoma | .d | 3438 to 3983 | 545 to 1 | 545/545 (100 %) | 1 diff (99.9 %id) | |||
| FN082774 | breast carcinoma | .d | 3439 to 3516 | 77 to 1 | Submitted on the opposite strand | 77/78 (98 %) | 1 diff (98.8 %id) | ||
| C01893 | .d | 3475 to 3613 | 1 to 139 | 139/139 (100 %) | 0 diff (100 %id) | ||||
| DB372164 | ovary, tumor tissue | .d | 3500 to 3977 | 478 to 1 | 478/480 (99 %) | 1 diff (99.8 %id) | |||
| Z41537 | brain, total brain | .d | 3696 to 3983 | 288 to 1 | 288/288 (100 %) | 0 diff (100 %id) | |||
| F03909 | brain, total brain | .d | 3724 to 3983 | 260 to 1 | 260/260 (100 %) | 0 diff (100 %id) | |||
| DB200886 | trachea | .e | 1 to 593 | 2 to 594 | tiling clone, capped | 593/595 (99 %) | 4 diff (99.4 %id) | ||
| DA531205 | brain | .e | 3 to 590 | 2 to 589 | capped | 588/588 (100 %) | 0 diff (100 %id) | ||
| DA690662 | .e | 6 to 461 | 2 to 457 | capped | 456/456 (100 %) | 0 diff (100 %id) | |||
| DA807857 | brain | .e | 6 to 613 | 2 to 609 | capped | 608/608 (100 %) | 1 diff (99.9 %id) | ||
| BM717499 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .e | 15 to 694 | 1 to 680 | tiling clone, | 680/680 (100 %) | 0 diff (100 %id) | ||
| CN425997 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .e | 89 to 674 | 1 to 587 | 587/587 (100 %) | 1 diff (99.9 %id) | |||
| AU132081 | .e | 647 to 1345 | 2 to 705 | tiling clone, capped | 704/705 (99 %) | 11 diff (98.5 %id) | |||
| DB369088 | .e | 1879 to 2447 | 564 to 1 | tiling clone, | 564/568 (99 %) | 11 diff (98.1 %id) | |||
| DB082779 | testis | .f | 1 to 558 | 2 to 559 | tiling clone, capped | 558/558 (100 %) | 0 diff (100 %id) | ||
| AL832895 | lymph node | .f | 18 to 1392 | 1 to 1376 | exact | tiling clone, available from DKFZ, AAA | Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) | 1376/1376 (100 %) | 1 diff (100.0 %id) |
| AW175725 | breast | .f | 490 to 749 | 262 to 1 | 262/262 (100 %) | 5 diff (98.1 %id) | |||
| BC107734 | placenta | .g-u | 1 to 1070 | 1 to 1070 | exact | tiling clone, AAA | 1070/1070 (100 %) | 3 diff (99.8 %id) | |
| BG623824 | placenta | .g-u | 4 to 849 | 1 to 838 | 838/893 (93 %) | 28 diff (96.9 %id) | |||
| AJ715128 | bone marrow | .g-u | 362 to 575 | 11 to 226 | 216/226 (95 %) | 6 diff (97.4 %id) | |||
| AA324130 | brain, cerebellum | .h | 1 to 359 | 1 to 362 | tiling clone, | 362/362 (100 %) | 4 diff (98.9 %id) | ||
| AW962011 | .h | 40 to 665 | 1 to 626 | L125X Y150F I155F I156F R160P ... | tiling clone, | 626/626 (100 %) | 11 diff (98.3 %id) | ||
| DB100132 | testis | .i | 1 to 576 | 2 to 580 | G4W G5R R6P G7R C9L ... | tiling clone, capped | 579/579 (100 %) | 3 diff (99.5 %id) | |
| BX493932 | .j | 1 to 509 | 1 to 509 | I21M E92K | tiling clone, | 509/515 (98 %) | 11 diff (97.9 %id) | ||
| BG572878 | placenta | .k-u | 1 to 707 | 7 to 717 | exact | tiling clone, | 717/717 (100 %) | 7 diff (99.1 %id) | |
| N93921 | multiple sclerosis lesions | .l | 1 to 480 | 1 to 483 | tiling clone, | 483/483 (100 %) | 7 diff (98.6 %id) | ||
| N62806 | multiple sclerosis lesions | .l | 1360 to 1696 | 339 to 1 | tiling clone, | 339/339 (100 %) | 2 diff (99.5 %id) | ||
| BI052434 | placenta_normal | .m | 1 to 214 | 1 to 211 | tiling clone, | 211/211 (100 %) | 5 diff (97.7 %id) | ||
| DA791814 | brain | .m | 192 to 494 | 2 to 304 | tiling clone, capped | 303/303 (100 %) | 5 diff (98.4 %id) | ||
| DA446891 | tongue, tumor tissue | .m | 362 to 854 | 2 to 494 | tiling clone, capped | 493/493 (100 %) | 2 diff (99.6 %id) | ||
| BX953476 | .n | 1 to 408 | 1 to 408 | exact | tiling clone, | 408/408 (100 %) | 2 diff (99.6 %id) | ||
| AW999389 | breast_normal | .n | 44 to 223 | 1 to 180 | 180/180 (100 %) | 0 diff (100 %id) | |||
| BF212558 | bone marrow, from chronic myelogenous leukemia | .n | 53 to 564 | 1 to 514 | 514/859 (59 %) | 13 diff (98.5 %id) | |||
| FN150930 | breast carcinoma | .n | 169 to 275 | 107 to 1 | Submitted on the opposite strand | 107/107 (100 %) | 0 diff (100 %id) | ||
| CB269119 | adipose | .n | 192 to 554 | 1 to 363 | tiling clone, | 363/363 (100 %) | 1 diff (99.8 %id) | ||
| BU193615 | testis | .n | 248 to 1072 | 1 to 838 | 838/838 (100 %) | 16 diff (98.1 %id) | |||
| CB158863 | Liver | .n | 293 to 842 | 1 to 551 | 551/551 (100 %) | 2 diff (99.7 %id) | |||
| BF698617 | brain, primitive neuroectoderm | .n | 415 to 1065 | 1 to 661 | 661/669 (98 %) | 54 diff (92.0 %id) | |||
| BF185897 | brain, glioblastoma | .n | 427 to 1076 | 1 to 634 | 634/858 (73 %) | 41 diff (95.3 %id) | |||
| GD137438 | .n | 543 to 1056 | 518 to 5 | tiling clone, AAA | Submitted on the opposite strand | 514/519 (99 %) | 0 diff (100 %id) | ||
| AI627818 | Kidney | .n | 565 to 1064 | 2 to 501 | tiling clone, | Submitted on the opposite strand | 500/501 (99 %) | 6 diff (98.9 %id) | |
| R24095 | placenta | .n | 567 to 892 | 1 to 339 | 339/350 (96 %) | 16 diff (95.5 %id) | |||
| BQ023470 | placenta | .n | 588 to 1093 | 1 to 505 | Submitted on the opposite strand | 505/505 (100 %) | 4 diff (99.3 %id) | ||
| BF245577 | brain, glioblastoma | .n | 615 to 1331 | 1 to 720 | 720/860 (83 %) | 24 diff (97.3 %id) | |||
| BF907149 | uterus_tumor | .n | 650 to 774 | 125 to 1 | Submitted on the opposite strand | 125/130 (96 %) | 3 diff (97.7 %id) | ||
| AL134768 | brain | .n | 710 to 1235 | 559 to 34 | Submitted on the opposite strand | 526/559 (94 %) | 0 diff (100 %id) | ||
| BQ084283 | stomach | .n | 845 to 1296 | 1 to 452 | 452/452 (100 %) | 0 diff (100 %id) | |||
| AW604083 | colon_normal | .n | 859 to 961 | 1 to 105 | 105/110 (95 %) | 6 diff (94.6 %id) | |||
| CN429840 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .n | 894 to 1489 | 1 to 595 | 595/595 (100 %) | 7 diff (98.9 %id) | |||
| BM470012 | melanotic melanoma, skin | .n | 940 to 1518 | 1 to 580 | tiling clone, AAA | 580/580 (100 %) | 1 diff (99.9 %id) | ||
| AW295099 | .n | 996 to 1327 | 1 to 332 | Submitted on the opposite strand | 332/338 (98 %) | 5 diff (98.6 %id) | |||
| AI761428 | pooled | .n | 1039 to 1465 | 431 to 1 | 431/431 (100 %) | 7 diff (98.4 %id) | |||
| BU564142 | mixed (pool of 40 RNAs) | .n | 1103 to 1519 | 1 to 417 | 417/446 (93 %) | 2 diff (99.6 %id) | |||
| AI827330 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .n | 1106 to 1527 | 435 to 14 | AAA | 422/422 (100 %) | 1 diff (99.8 %id) | ||
| AW779332 | Kidney | .n | 1118 to 1528 | 413 to 3 | 411/413 (99 %) | 0 diff (100 %id) | |||
| BM767255 | Ascites, stomach | .n | 1161 to 1527 | 1 to 367 | AAA | 367/367 (100 %) | 0 diff (100 %id) | ||
| AW449312 | .n | 1170 to 1527 | 375 to 18 | AAA | 358/362 (98 %) | 9 diff (97.6 %id) | |||
| FN069051 | breast carcinoma | .n | 1205 to 1279 | 74 to 1 | Submitted on the opposite strand | 74/75 (98 %) | 1 diff (98.7 %id) | ||
| AA741074 | germinal center B cell | .n | 1218 to 1527 | 346 to 37 | AAA | 310/310 (100 %) | 0 diff (100 %id) | ||
| Z44512 | brain, total brain | .n | 1229 to 1538 | 1 to 310 | 310/310 (100 %) | 1 diff (99.7 %id) | |||
| FN103582 | breast carcinoma | .n | 1328 to 1413 | 90 to 1 | Submitted on the opposite strand | 90/94 (95 %) | 3 diff (96.9 %id) | ||
| CF136115 | lymph | .n | 1393 to 1897 | 1 to 505 | tiling clone, | 505/505 (100 %) | 11 diff (97.9 %id) | ||
| TI_154164969 | .n | 1400 to 2025 | 75 to 700 | 626/869 (72 %) | 29 diff (96.7 %id) | ||||
| R24044 | placenta | .n | 1417 to 1527 | 129 to 19 | AAA | 111/113 (98 %) | 0 diff (100 %id) | ||
| AA377587 | synovial membrane | .n | 1567 to 1815 | 1 to 251 | 251/251 (100 %) | 2 diff (99.3 %id) | |||
| AA378188 | synovial membrane | .n | 1567 to 1902 | 1 to 336 | 336/336 (100 %) | 0 diff (100 %id) | |||
| AW957425 | .n | 1568 to 2058 | 1 to 493 | 493/495 (99 %) | 19 diff (96.2 %id) | ||||
| DB117607 | thymus | .n | 1665 to 2230 | 2 to 567 | capped | 566/566 (100 %) | 0 diff (100 %id) | ||
| AW967953 | .n | 1787 to 2381 | 1 to 597 | tiling clone, | 597/604 (98 %) | 15 diff (97.6 %id) | |||
| AA256773 | germinal center B cell | .n | 1787 to 2236 | 1 to 450 | 450/450 (100 %) | 0 diff (100 %id) | |||
| AA287170 | germinal center B cell | .n | 1787 to 2215 | 1 to 429 | 429/429 (100 %) | 0 diff (100 %id) | |||
| TI_57243017 | .n | 1986 to 2654 | 20 to 698 | 679/802 (84 %) | 33 diff (95.9 %id) | ||||
| BI916449 | brain | .n | 1992 to 2654 | 1 to 673 | 673/777 (86 %) | 46 diff (94.1 %id) | |||
| AA255637 | germinal center B cell | .n | 2081 to 2242 | 1 to 161 | 161/161 (100 %) | 4 diff (97.6 %id) | |||
| CR596467 | fetal liver | .n | 2138 to 3571 | 1 to 1434 | tiling clone, | 1434/1434 (100 %) | 0 diff (100 %id) | ||
| AL531492 | brain, fetal liver, Liver, neuroblastoma cells | .n | 2138 to 2560 | 1 to 423 | 423/423 (100 %) | 0 diff (100 %id) | |||
| AA262703 | germinal center B cell | .n | 2562 to 2862 | 301 to 1 | 301/301 (100 %) | 0 diff (100 %id) | |||
| DB343760 | thymus | .n | 3042 to 3607 | 571 to 1 | 571/571 (100 %) | 5 diff (99.2 %id) | |||
| Z40411 | brain, total brain | .n | 3338 to 3607 | 270 to 1 | tiling clone, | 270/270 (100 %) | 2 diff (99.3 %id) | ||
| DW410411 | Liver | .o-u | 332 to 638 | 317 to 10 | tiling clone, | 308/334 (92 %) | 0 diff (100 %id) | ||
| R67541 | placenta | .p-u | 1 to 366 | 1 to 367 | tiling clone, fully sequenced, | 367/367 (100 %) | 3 diff (99.2 %id) | ||
| R67542 | placenta | .p-u | 357 to 666 | 310 to 1 | K12X K16E Y19X Y30X V33X ... | tiling clone, fully sequenced, | 310/310 (100 %) | 7 diff (97.8 %id) | |
| BE070208 | breast | .q-u | 1 to 376 | 1 to 377 | D22R C23L P24S K25Q A26S ... | tiling clone, | 377/377 (100 %) | 7 diff (98.2 %id) | |
| BF515289 | .r | 1 to 337 | 354 to 18 | exact | tiling clone, AAA | 337/347 (97 %) | 1 diff (99.8 %id) | ||
| BQ883246 | dorsal root ganglia | Gene WHSC1L1, variant not shown |